RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 RPL38P63173 70 aaKnown RBP17.81■□□□□ 0.44
SYNE4-202ENST00000340477 C2orf80Q0P641 193 aa17.81■□□□□ 0.44
SYNE4-202ENST00000340477 MAPKAPK3Q16644 382 aa17.81■□□□□ 0.44
SYNE4-202ENST00000340477 GALNTL6Q49A17 601 aa17.81■□□□□ 0.44
SYNE4-202ENST00000340477 SLC25A25Q6KCM7 469 aa17.81■□□□□ 0.44
SYNE4-202ENST00000340477 OPN5Q6U736 354 aa17.81■□□□□ 0.44
SYNE4-202ENST00000340477 DGAT2L6Q6ZPD8 337 aa17.81■□□□□ 0.44
SYNE4-202ENST00000340477 MMP21Q8N119 569 aa17.81■□□□□ 0.44
SYNE4-202ENST00000340477 VWA5B2Q8N398 1253 aa17.81■□□□□ 0.44
SYNE4-202ENST00000340477 OR7G1Q8NGA0 311 aa17.81■□□□□ 0.44
SYNE4-202ENST00000340477 DNAJB8Q8NHS0 232 aa17.81■□□□□ 0.44
SYNE4-202ENST00000340477 FAR1Q8WVX9 515 aa17.81■□□□□ 0.44
SYNE4-202ENST00000340477 C11orf24Q96F05 449 aaPredicted RBP17.81■□□□□ 0.44
SYNE4-202ENST00000340477 TRIM45Q9H8W5 580 aaPredicted RBP17.81■□□□□ 0.44
SYNE4-202ENST00000340477 TIMMDC1Q9NPL8 285 aa17.81■□□□□ 0.44
SYNE4-202ENST00000340477 CFL2Q9Y281 166 aa17.81■□□□□ 0.44
SYNE4-202ENST00000340477 KLF13Q9Y2Y9 288 aaPredicted RBP17.81■□□□□ 0.44
SYNE4-202ENST00000340477 PTGDR2Q9Y5Y4 395 aa17.81■□□□□ 0.44
SYNE4-202ENST00000340477 SHANK1Q9Y566 2161 aa17.81■□□□□ 0.44
SYNE4-202ENST00000340477 SPENQ96T58 3664 aaKnown RBP17.81■□□□□ 0.44
SYNE4-202ENST00000340477 NPIPB8E9PQR5 432 aa17.8■□□□□ 0.44
SYNE4-202ENST00000340477 PIP5K1BO14986 540 aa17.8■□□□□ 0.44
SYNE4-202ENST00000340477 NEURL1O76050 574 aa17.8■□□□□ 0.44
SYNE4-202ENST00000340477 SP1P08047 785 aa17.8■□□□□ 0.44
SYNE4-202ENST00000340477 DHRS4L1P0CG22 281 aa17.8■□□□□ 0.44
SYNE4-202ENST00000340477 DDX5P17844 614 aaKnown RBP17.8■□□□□ 0.44
SYNE4-202ENST00000340477 DDCP20711 480 aa17.8■□□□□ 0.44
SYNE4-202ENST00000340477 ST13P50502 369 aaKnown RBP17.8■□□□□ 0.44
SYNE4-202ENST00000340477 ABCE1P61221 599 aaKnown RBP17.8■□□□□ 0.44
SYNE4-202ENST00000340477 MPEG1Q2M385 716 aa17.8■□□□□ 0.44
SYNE4-202ENST00000340477 HDXQ7Z353 690 aa17.8■□□□□ 0.44
SYNE4-202ENST00000340477 C9orf40Q8IXQ3 194 aa17.8■□□□□ 0.44
SYNE4-202ENST00000340477 DOK4Q8TEW6 326 aa17.8■□□□□ 0.44
SYNE4-202ENST00000340477 SCMH1Q96GD3 660 aa17.8■□□□□ 0.44
SYNE4-202ENST00000340477 PPP3R2Q96LZ3 170 aa17.8■□□□□ 0.44
SYNE4-202ENST00000340477 BBS4Q96RK4 519 aa17.8■□□□□ 0.44
SYNE4-202ENST00000340477 RASL10BQ96S79 203 aa17.8■□□□□ 0.44
SYNE4-202ENST00000340477 LIN28AQ9H9Z2 209 aaKnown RBP17.8■□□□□ 0.44
SYNE4-202ENST00000340477 HEY2Q9UBP5 337 aa17.8■□□□□ 0.44
SYNE4-202ENST00000340477 HRKO00198 91 aa17.79■□□□□ 0.44
SYNE4-202ENST00000340477 NME2P1O60361 137 aa17.79■□□□□ 0.44
SYNE4-202ENST00000340477 SKAP2O75563 359 aaPredicted RBP17.79■□□□□ 0.44
SYNE4-202ENST00000340477 NME2P22392 152 aa17.79■□□□□ 0.44
SYNE4-202ENST00000340477 NTSP30990 170 aa17.79■□□□□ 0.44
SYNE4-202ENST00000340477 SLC37A1P57057 533 aa17.79■□□□□ 0.44
SYNE4-202ENST00000340477 ZNF750Q32MQ0 723 aa17.79■□□□□ 0.44
SYNE4-202ENST00000340477 ATP6AP1LQ52LC2 224 aa17.79■□□□□ 0.44
SYNE4-202ENST00000340477 AGBL2Q5U5Z8 902 aa17.79■□□□□ 0.44
SYNE4-202ENST00000340477 ZNF468Q5VIY5 522 aaPredicted RBP17.79■□□□□ 0.44
SYNE4-202ENST00000340477 GALNTL5Q7Z4T8 443 aa17.79■□□□□ 0.44
SYNE4-202ENST00000340477 TRIM42Q8IWZ5 723 aa17.79■□□□□ 0.44
SYNE4-202ENST00000340477 DND1Q8IYX4 353 aaKnown RBP17.79■□□□□ 0.44
SYNE4-202ENST00000340477 TAGAPQ8N103 731 aa17.79■□□□□ 0.44
SYNE4-202ENST00000340477 SLC15A4Q8N697 577 aa17.79■□□□□ 0.44
SYNE4-202ENST00000340477 OR6Y1Q8NGX8 325 aa17.79■□□□□ 0.44
SYNE4-202ENST00000340477 MGARPQ8TDB4 240 aa17.79■□□□□ 0.44
SYNE4-202ENST00000340477 WWTR1Q9GZV5 400 aa17.79■□□□□ 0.44
SYNE4-202ENST00000340477 TUBB1Q9H4B7 451 aa17.79■□□□□ 0.44
SYNE4-202ENST00000340477 SLC35C2Q9NQQ7 365 aa17.79■□□□□ 0.44
SYNE4-202ENST00000340477 ZDHHC2Q9UIJ5 367 aa17.79■□□□□ 0.44
SYNE4-202ENST00000340477 NTNG1Q9Y2I2 539 aa17.79■□□□□ 0.44
SYNE4-202ENST00000340477 CCL27Q9Y4X3 112 aa17.79■□□□□ 0.44
SYNE4-202ENST00000340477 C2orf92A0A1B0GVN3 265 aa17.78■□□□□ 0.44
SYNE4-202ENST00000340477 A0A1W2PS29 197 aa17.78■□□□□ 0.44
SYNE4-202ENST00000340477 TMEM200CA6NKL6 621 aa17.78■□□□□ 0.44
SYNE4-202ENST00000340477 TCP11X1B4DZS4 312 aa17.78■□□□□ 0.44
SYNE4-202ENST00000340477 KLRC4-KLRK1H3BQV0 150 aa17.78■□□□□ 0.44
SYNE4-202ENST00000340477 LSM1O15116 133 aaKnown RBP17.78■□□□□ 0.44
SYNE4-202ENST00000340477 EDN3P14138 238 aa17.78■□□□□ 0.44
SYNE4-202ENST00000340477 BGNP21810 368 aa17.78■□□□□ 0.44
SYNE4-202ENST00000340477 SSTR4P31391 388 aa17.78■□□□□ 0.44
SYNE4-202ENST00000340477 MPIP34949 423 aa17.78■□□□□ 0.44
SYNE4-202ENST00000340477 SOX3P41225 446 aa17.78■□□□□ 0.44
SYNE4-202ENST00000340477 ASMTP46597 345 aa17.78■□□□□ 0.44
SYNE4-202ENST00000340477 SLC1A6P48664 564 aa17.78■□□□□ 0.44
SYNE4-202ENST00000340477 SLC18A1P54219 525 aa17.78■□□□□ 0.44
SYNE4-202ENST00000340477 FUT7Q11130 342 aa17.78■□□□□ 0.44
SYNE4-202ENST00000340477 STX3Q13277 289 aa17.78■□□□□ 0.44
SYNE4-202ENST00000340477 EBPQ15125 230 aaKnown RBP17.78■□□□□ 0.44
SYNE4-202ENST00000340477 IL20RBQ6UXL0 311 aa17.78■□□□□ 0.44
SYNE4-202ENST00000340477 RTL4Q6ZR62 310 aa17.78■□□□□ 0.44
SYNE4-202ENST00000340477 FAM9CQ8IZT9 166 aa17.78■□□□□ 0.44
SYNE4-202ENST00000340477 OR2T11Q8NH01 316 aa17.78■□□□□ 0.44
SYNE4-202ENST00000340477 TLCD1Q96CP7 247 aa17.78■□□□□ 0.44
SYNE4-202ENST00000340477 CNRIP1Q96F85 164 aaPredicted RBP17.78■□□□□ 0.44
SYNE4-202ENST00000340477 HES7Q9BYE0 225 aa17.78■□□□□ 0.44
SYNE4-202ENST00000340477 OR10A5Q9H207 317 aa17.78■□□□□ 0.44
SYNE4-202ENST00000340477 BCAP29Q9UHQ4 241 aa17.78■□□□□ 0.44
SYNE4-202ENST00000340477 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.78■□□□□ 0.44
SYNE4-202ENST00000340477 RAP2CQ9Y3L5 183 aa17.78■□□□□ 0.44
SYNE4-202ENST00000340477 ANKUB1A6NFN9 424 aa17.77■□□□□ 0.44
SYNE4-202ENST00000340477 CAPN14A8MX76 684 aa17.77■□□□□ 0.44
SYNE4-202ENST00000340477 LYPLA1O75608 230 aaPredicted RBP17.77■□□□□ 0.44
SYNE4-202ENST00000340477 BCAS2O75934 225 aaPredicted RBP17.77■□□□□ 0.44
SYNE4-202ENST00000340477 OR6B1O95007 311 aa17.77■□□□□ 0.44
SYNE4-202ENST00000340477 GNLYP22749 145 aa17.77■□□□□ 0.44
SYNE4-202ENST00000340477 NRG3P56975 720 aa17.77■□□□□ 0.44
SYNE4-202ENST00000340477 MAP4K2Q12851 820 aa17.77■□□□□ 0.44
SYNE4-202ENST00000340477 MPP2Q14168 576 aa17.77■□□□□ 0.44
SYNE4-202ENST00000340477 PRICKLE4Q2TBC4 344 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms