RNA–Protein interactions for RNA: ENST00000340342.10

CTSL-201, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-201ENST00000340342 WDR55Q9H6Y2 383 aaPredicted RBP13.22□□□□□ -0.29
CTSL-201ENST00000340342 LIN28AQ9H9Z2 209 aaKnown RBP13.22□□□□□ -0.29
CTSL-201ENST00000340342 CXorf21Q9HAI6 301 aa13.22□□□□□ -0.29
CTSL-201ENST00000340342 SLAMF7Q9NQ25 335 aa13.22□□□□□ -0.29
CTSL-201ENST00000340342 MIEF1Q9NQG6 463 aa13.22□□□□□ -0.29
CTSL-201ENST00000340342 PSME2Q9UL46 239 aa13.22□□□□□ -0.29
CTSL-201ENST00000340342 ERVK-19Q9WJR5 959 aa13.22□□□□□ -0.29
CTSL-201ENST00000340342 ZNF780BQ9Y6R6 833 aa13.22□□□□□ -0.29
CTSL-201ENST00000340342 GOLGA8QA0A0J9YX86 632 aa13.22□□□□□ -0.29
CTSL-201ENST00000340342 GOLGA8OA6NCC3 632 aa13.22□□□□□ -0.29
CTSL-201ENST00000340342 GOLGA8NF8WBI6 632 aa13.22□□□□□ -0.29
CTSL-201ENST00000340342 IGKV3-11P04433 115 aa13.22□□□□□ -0.29
CTSL-201ENST00000340342 CSNK2A2P19784 350 aaPredicted RBP13.22□□□□□ -0.29
CTSL-201ENST00000340342 NT5EP21589 574 aa13.22□□□□□ -0.29
CTSL-201ENST00000340342 EPHA3P29320 983 aa13.22□□□□□ -0.29
CTSL-201ENST00000340342 MFAP5Q13361 173 aa13.22□□□□□ -0.29
CTSL-201ENST00000340342 SPRED3Q2MJR0 410 aa13.22□□□□□ -0.29
CTSL-201ENST00000340342 PLEKHN1Q494U1 663 aaPredicted RBP13.22□□□□□ -0.29
CTSL-201ENST00000340342 ACER2Q5QJU3 275 aa13.22□□□□□ -0.29
CTSL-201ENST00000340342 SLC6A19Q695T7 634 aa13.22□□□□□ -0.29
CTSL-201ENST00000340342 C16orf47Q6ZP98 133 aaPredicted RBP13.22□□□□□ -0.29
CTSL-201ENST00000340342 GALNT12Q8IXK2 581 aa13.22□□□□□ -0.29
CTSL-201ENST00000340342 CCDC116Q8IYX3 515 aa13.22□□□□□ -0.29
CTSL-201ENST00000340342 LRRC25Q8N386 305 aaPredicted RBP13.22□□□□□ -0.29
CTSL-201ENST00000340342 PIWIL2Q8TC59 973 aaKnown RBP13.22□□□□□ -0.29
CTSL-201ENST00000340342 NUDT8Q8WV74 236 aa13.22□□□□□ -0.29
CTSL-201ENST00000340342 FBXL20Q96IG2 436 aa13.22□□□□□ -0.29
CTSL-201ENST00000340342 C7orf26Q96N11 449 aa13.22□□□□□ -0.29
CTSL-201ENST00000340342 DEFB126Q9BYW3 111 aa13.22□□□□□ -0.29
CTSL-201ENST00000340342 CDCP1Q9H5V8 836 aa13.22□□□□□ -0.29
CTSL-201ENST00000340342 SLC35C2Q9NQQ7 365 aa13.22□□□□□ -0.29
CTSL-201ENST00000340342 PLA2G3Q9NZ20 509 aa13.22□□□□□ -0.29
CTSL-201ENST00000340342 EHD3Q9NZN3 535 aa13.22□□□□□ -0.29
CTSL-201ENST00000340342 COPS7AQ9UBW8 275 aa13.22□□□□□ -0.29
CTSL-201ENST00000340342 EML6Q6ZMW3 1958 aa13.21□□□□□ -0.29
CTSL-201ENST00000340342 ZNF195O14628 629 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 DYRK3O43781 588 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 SORBS2O94875 1100 aaKnown RBP13.21□□□□□ -0.3
CTSL-201ENST00000340342 WISP1O95388 367 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 CLPSP04118 112 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 ATP1B1P05026 303 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 G6PDP11413 515 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 MAPK1P28482 360 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 SSTR4P31391 388 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 LSP1P33241 339 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 GALNSP34059 522 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 SOX18P35713 384 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 DIO3P55073 304 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 EMX2Q04743 252 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 SLC9B1Q4ZJI4 515 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 ZNF385BQ569K4 471 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 ABHD17BQ5VST6 288 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 FAM111BQ6SJ93 734 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 HSDL2Q6YN16 418 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 Q6ZS92 163 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 LARP4Q71RC2 724 aaKnown RBP eCLIP13.21□□□□□ -0.34e-9■■■■□ 22.1
CTSL-201ENST00000340342 BEST3Q8N1M1 668 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 SLC5A8Q8N695 610 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 KRTCAP2Q8N6L1 136 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 SIMC1Q8NDZ2 872 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 C7orf57Q8NEG2 295 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 OR9A2Q8NGT5 310 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 SUN3Q8TAQ9 357 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 BRINP2Q9C0B6 783 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 REEP4Q9H6H4 257 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 STMN3Q9NZ72 180 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 NOP53Q9NZM5 478 aaKnown RBP13.21□□□□□ -0.3
CTSL-201ENST00000340342 LUZP4Q9P127 313 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 TEKT2Q9UIF3 430 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 ENTPD4Q9Y227 616 aa13.21□□□□□ -0.3
CTSL-201ENST00000340342 WBP11Q9Y2W2 641 aaKnown RBP13.21□□□□□ -0.3
CTSL-201ENST00000340342 TENM4Q6N022 2769 aa13.2□□□□□ -0.3
CTSL-201ENST00000340342 NBASA2RRP1 2371 aa13.2□□□□□ -0.3
CTSL-201ENST00000340342 TMEM200CA6NKL6 621 aa13.2□□□□□ -0.3
CTSL-201ENST00000340342 TRPC5OSA6NMA1 111 aa13.2□□□□□ -0.3
CTSL-201ENST00000340342 SLCO1B7G3V0H7 640 aa13.2□□□□□ -0.3
CTSL-201ENST00000340342 SHOX2O60902 331 aaPredicted RBP13.2□□□□□ -0.3
CTSL-201ENST00000340342 WDPCPO95876 746 aa13.2□□□□□ -0.3
CTSL-201ENST00000340342 ASMTP46597 345 aa13.2□□□□□ -0.3
CTSL-201ENST00000340342 MLLT10P55197 1068 aa13.2□□□□□ -0.3
CTSL-201ENST00000340342 SLC37A1P57057 533 aa13.2□□□□□ -0.3
CTSL-201ENST00000340342 MRPS35P82673 323 aaKnown RBP13.2□□□□□ -0.3
CTSL-201ENST00000340342 KCNC4Q03721 635 aa13.2□□□□□ -0.3
CTSL-201ENST00000340342 MGAT2Q10469 447 aa13.2□□□□□ -0.3
CTSL-201ENST00000340342 MPEG1Q2M385 716 aa13.2□□□□□ -0.3
CTSL-201ENST00000340342 PRICKLE4Q2TBC4 344 aa13.2□□□□□ -0.3
CTSL-201ENST00000340342 RGS9BPQ6ZS82 235 aa13.2□□□□□ -0.3
CTSL-201ENST00000340342 RPS19BP1Q86WX3 136 aaKnown RBP13.2□□□□□ -0.3
CTSL-201ENST00000340342 C9orf40Q8IXQ3 194 aa13.2□□□□□ -0.3
CTSL-201ENST00000340342 OR7A2PQ8NGA2 310 aa13.2□□□□□ -0.3
CTSL-201ENST00000340342 HAS2Q92819 552 aa13.2□□□□□ -0.3
CTSL-201ENST00000340342 KAT2AQ92830 837 aa13.2□□□□□ -0.3
CTSL-201ENST00000340342 CIDECQ96AQ7 238 aaPredicted RBP13.2□□□□□ -0.3
CTSL-201ENST00000340342 ZNF354BQ96LW1 612 aa13.2□□□□□ -0.3
CTSL-201ENST00000340342 BBS4Q96RK4 519 aa13.2□□□□□ -0.3
CTSL-201ENST00000340342 TRIM4Q9C037 500 aa13.2□□□□□ -0.3
CTSL-201ENST00000340342 ANKRA2Q9H9E1 313 aa13.2□□□□□ -0.3
CTSL-201ENST00000340342 GIMAP4Q9NUV9 329 aa13.2□□□□□ -0.3
CTSL-201ENST00000340342 ANKRD10Q9NXR5 420 aa13.2□□□□□ -0.3
CTSL-201ENST00000340342 TAS2R7Q9NYW3 318 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms