RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 SLC35C2Q9NQQ7 365 aa14.16□□□□□ -0.14
UBE3B-201ENST00000340074 PNPOQ9NVS9 261 aa14.16□□□□□ -0.14
UBE3B-201ENST00000340074 ZNF446Q9NWS9 450 aa14.16□□□□□ -0.14
UBE3B-201ENST00000340074 EHD3Q9NZN3 535 aa14.16□□□□□ -0.14
UBE3B-201ENST00000340074 MYOTQ9UBF9 498 aa14.16□□□□□ -0.14
UBE3B-201ENST00000340074 EXO1Q9UQ84 846 aaKnown RBP14.16□□□□□ -0.14
UBE3B-201ENST00000340074 WBP11Q9Y2W2 641 aaKnown RBP14.16□□□□□ -0.14
UBE3B-201ENST00000340074 PCDHGA10Q9Y5H3 936 aa14.16□□□□□ -0.14
UBE3B-201ENST00000340074 UQCRHLA0A096LP55 91 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 SNNO75324 88 aaPredicted RBP14.15□□□□□ -0.14
UBE3B-201ENST00000340074 OR2J2O76002 312 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 CLPSP04118 112 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 SDC1P18827 310 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 SSTR4P31391 388 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 HK2P52789 917 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 SLC37A1P57057 533 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 OC90Q02509 493 aaPredicted RBP14.15□□□□□ -0.14
UBE3B-201ENST00000340074 PRICKLE4Q2TBC4 344 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 C6orf136Q5SQH8 315 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 C6orf163Q5TEZ5 329 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 ATG16L1Q676U5 607 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 SPINK14Q6IE38 97 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 RNF111Q6ZNA4 994 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 IKBIPQ70UQ0 350 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 TICAM1Q8IUC6 712 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 TRIM42Q8IWZ5 723 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 C9orf40Q8IXQ3 194 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 CCDC116Q8IYX3 515 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 LRRC25Q8N386 305 aaPredicted RBP14.15□□□□□ -0.14
UBE3B-201ENST00000340074 ADCY4Q8NFM4 1077 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 OR8K3Q8NH51 312 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 RAB3IL1Q8TBN0 382 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 GFM2Q969S9 779 aaKnown RBP14.15□□□□□ -0.14
UBE3B-201ENST00000340074 TUBGCP3Q96CW5 907 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 TSSK3Q96PN8 268 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 BRINP2Q9C0B6 783 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 THAP1Q9NVV9 213 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 BAIAP2L1Q9UHR4 511 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 TRAV17A0A0B4J275 112 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 WWP2O00308 870 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 LRATO95237 230 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 BCKDHAP12694 445 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 NUP214P35658 2090 aaPredicted RBP14.15□□□□□ -0.14
UBE3B-201ENST00000340074 MGAT2Q10469 447 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 FUT7Q11130 342 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 OR1C1Q15619 314 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 LTB4RQ15722 352 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 INPP5JQ15735 1006 aaPredicted RBP14.15□□□□□ -0.14
UBE3B-201ENST00000340074 CEBPEQ15744 281 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 FAM111BQ6SJ93 734 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 KIRREL3Q8IZU9 778 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 TMEM156Q8N614 296 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 FNDC5Q8NAU1 212 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 MDS2Q8NDY4 140 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 OR5L2Q8NGL0 311 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 CLHC1Q8NHS4 586 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 SUN3Q8TAQ9 357 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 CPT1CQ8TCG5 803 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 C1orf50Q9BV19 199 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 GIMAP4Q9NUV9 329 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.15□□□□□ -0.14
UBE3B-201ENST00000340074 MAT2BQ9NZL9 334 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 LRFN1Q9P244 771 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 ENTPD4Q9Y227 616 aa14.15□□□□□ -0.14
UBE3B-201ENST00000340074 YARS2Q9Y2Z4 477 aaKnown RBP14.15□□□□□ -0.14
UBE3B-201ENST00000340074 NBASA2RRP1 2371 aa14.14□□□□□ -0.15
UBE3B-201ENST00000340074 RELNP78509 3460 aa14.14□□□□□ -0.15
UBE3B-201ENST00000340074 PYCARD-AS1I3L0S3 204 aa14.14□□□□□ -0.15
UBE3B-201ENST00000340074 CDK2AP1O14519 115 aa14.14□□□□□ -0.15
UBE3B-201ENST00000340074 AKAP10O43572 662 aa14.14□□□□□ -0.15
UBE3B-201ENST00000340074 PRAMEF2O60811 474 aa14.14□□□□□ -0.15
UBE3B-201ENST00000340074 NEURL1O76050 574 aa14.14□□□□□ -0.15
UBE3B-201ENST00000340074 S1PR1P21453 382 aa14.14□□□□□ -0.15
UBE3B-201ENST00000340074 MAPK1P28482 360 aa14.14□□□□□ -0.15
UBE3B-201ENST00000340074 TRHRP34981 398 aaPredicted RBP14.14□□□□□ -0.15
UBE3B-201ENST00000340074 CYB561P49447 251 aa14.14□□□□□ -0.15
UBE3B-201ENST00000340074 SSR4P51571 173 aa14.14□□□□□ -0.15
UBE3B-201ENST00000340074 MAP4K2Q12851 820 aa14.14□□□□□ -0.15
UBE3B-201ENST00000340074 SLC29A4Q7RTT9 530 aa14.14□□□□□ -0.15
UBE3B-201ENST00000340074 ZNF227Q86WZ6 799 aa14.14□□□□□ -0.15
UBE3B-201ENST00000340074 SAMD14Q8IZD0 417 aaPredicted RBP14.14□□□□□ -0.15
UBE3B-201ENST00000340074 VWA5B2Q8N398 1253 aa14.14□□□□□ -0.15
UBE3B-201ENST00000340074 LIX1Q8N485 282 aa14.14□□□□□ -0.15
UBE3B-201ENST00000340074 CISD2Q8N5K1 135 aaKnown RBP14.14□□□□□ -0.15
UBE3B-201ENST00000340074 ZNF615Q8N8J6 731 aa14.14□□□□□ -0.15
UBE3B-201ENST00000340074 OR9A2Q8NGT5 310 aa14.14□□□□□ -0.15
UBE3B-201ENST00000340074 NUBPLQ8TB37 319 aa14.14□□□□□ -0.15
UBE3B-201ENST00000340074 ZNF75CPQ92670 426 aaPredicted RBP14.14□□□□□ -0.15
UBE3B-201ENST00000340074 CTHRC1Q96CG8 243 aa14.14□□□□□ -0.15
UBE3B-201ENST00000340074 SNRNP40Q96DI7 357 aaKnown RBP14.14□□□□□ -0.15
UBE3B-201ENST00000340074 BBS4Q96RK4 519 aa14.14□□□□□ -0.15
UBE3B-201ENST00000340074 RASL10BQ96S79 203 aa14.14□□□□□ -0.15
UBE3B-201ENST00000340074 NUF2Q9BZD4 464 aa14.14□□□□□ -0.15
UBE3B-201ENST00000340074 OR10A5Q9H207 317 aa14.14□□□□□ -0.15
UBE3B-201ENST00000340074 TAS2R7Q9NYW3 318 aa14.14□□□□□ -0.15
UBE3B-201ENST00000340074 MAP10Q9P2G4 905 aa14.14□□□□□ -0.15
UBE3B-201ENST00000340074 SVILO95425 2214 aa14.14□□□□□ -0.15
UBE3B-201ENST00000340074 OR6C76A6NM76 312 aa14.13□□□□□ -0.15
UBE3B-201ENST00000340074 MYO1GB0I1T2 1018 aa14.13□□□□□ -0.15
UBE3B-201ENST00000340074 KLF11O14901 512 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms