RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 TREX2Q9BQ50 279 aaPredicted RBP12□□□□□ -0.49
DFFB-202ENST00000339350 CNPPD1Q9BV87 410 aa12□□□□□ -0.49
DFFB-202ENST00000339350 LATS2Q9NRM7 1088 aa12□□□□□ -0.49
DFFB-202ENST00000339350 SNTG1Q9NSN8 517 aa12□□□□□ -0.49
DFFB-202ENST00000339350 ZNF624Q9P2J8 865 aaPredicted RBP12□□□□□ -0.49
DFFB-202ENST00000339350 PLXNA4Q9HCM2 1894 aa12□□□□□ -0.49
DFFB-202ENST00000339350 GTPBP1O00178 669 aaKnown RBP12□□□□□ -0.49
DFFB-202ENST00000339350 FPGTO14772 594 aa12□□□□□ -0.49
DFFB-202ENST00000339350 SEPT4O43236 478 aa12□□□□□ -0.49
DFFB-202ENST00000339350 ORC5O43913 435 aa12□□□□□ -0.49
DFFB-202ENST00000339350 SELENOFO60613 162 aa12□□□□□ -0.49
DFFB-202ENST00000339350 ULK1O75385 1050 aa12□□□□□ -0.49
DFFB-202ENST00000339350 GPX4P36969 197 aaPredicted RBP12□□□□□ -0.49
DFFB-202ENST00000339350 ALDH9A1P49189 494 aa12□□□□□ -0.49
DFFB-202ENST00000339350 DAPP51397 102 aa12□□□□□ -0.49
DFFB-202ENST00000339350 CASP9P55211 416 aa12□□□□□ -0.49
DFFB-202ENST00000339350 CLDN20P56880 219 aa12□□□□□ -0.49
DFFB-202ENST00000339350 RPS7P62081 194 aaKnown RBP12□□□□□ -0.49
DFFB-202ENST00000339350 SLC3A1Q07837 685 aa12□□□□□ -0.49
DFFB-202ENST00000339350 SF1Q15637 639 aaKnown RBP12□□□□□ -0.49
DFFB-202ENST00000339350 MPEG1Q2M385 716 aa12□□□□□ -0.49
DFFB-202ENST00000339350 LCN1P1Q5VSP4 162 aa12□□□□□ -0.49
DFFB-202ENST00000339350 ARHGAP11AQ6P4F7 1023 aa12□□□□□ -0.49
DFFB-202ENST00000339350 EIF3MQ7L2H7 374 aaKnown RBP12□□□□□ -0.49
DFFB-202ENST00000339350 ZNF551Q7Z340 670 aaPredicted RBP12□□□□□ -0.49
DFFB-202ENST00000339350 GPR155Q7Z3F1 870 aa12□□□□□ -0.49
DFFB-202ENST00000339350 ZFP82Q8N141 532 aa12□□□□□ -0.49
DFFB-202ENST00000339350 ZBED6CLQ96FA7 236 aaPredicted RBP12□□□□□ -0.49
DFFB-202ENST00000339350 VRK1Q99986 396 aaPredicted RBP12□□□□□ -0.49
DFFB-202ENST00000339350 DPH2Q9BQC3 489 aaPredicted RBP12□□□□□ -0.49
DFFB-202ENST00000339350 ZPBPQ9BS86 351 aa12□□□□□ -0.49
DFFB-202ENST00000339350 OR51M1Q9H341 326 aa12□□□□□ -0.49
DFFB-202ENST00000339350 ABCB9Q9NP78 766 aa12□□□□□ -0.49
DFFB-202ENST00000339350 TLR8Q9NR97 1041 aaKnown RBP12□□□□□ -0.49
DFFB-202ENST00000339350 DCAF13Q9NV06 445 aaKnown RBP12□□□□□ -0.49
DFFB-202ENST00000339350 KIF25Q9UIL4 384 aa12□□□□□ -0.49
DFFB-202ENST00000339350 NDRG2Q9UN36 371 aaKnown RBP12□□□□□ -0.49
DFFB-202ENST00000339350 PRAMEF33A0A0G2JMD5 474 aa12□□□□□ -0.49
DFFB-202ENST00000339350 LOC390937A0A1W2PQ73 354 aa12□□□□□ -0.49
DFFB-202ENST00000339350 PRAMEF10O60809 474 aa12□□□□□ -0.49
DFFB-202ENST00000339350 PRKRAO75569 313 aaKnown RBP12□□□□□ -0.49
DFFB-202ENST00000339350 RGS11O94810 467 aa12□□□□□ -0.49
DFFB-202ENST00000339350 SLC25A14O95258 325 aaPredicted RBP12□□□□□ -0.49
DFFB-202ENST00000339350 OTCP00480 354 aa12□□□□□ -0.49
DFFB-202ENST00000339350 RB1P06400 928 aa12□□□□□ -0.49
DFFB-202ENST00000339350 LIMK1P53667 647 aa12□□□□□ -0.49
DFFB-202ENST00000339350 YBEYP58557 167 aaPredicted RBP12□□□□□ -0.49
DFFB-202ENST00000339350 CAMK1Q14012 370 aa12□□□□□ -0.49
DFFB-202ENST00000339350 GLYR1Q49A26 553 aaPredicted RBP12□□□□□ -0.49
DFFB-202ENST00000339350 SLC25A25Q6KCM7 469 aa12□□□□□ -0.49
DFFB-202ENST00000339350 DOK6Q6PKX4 331 aa12□□□□□ -0.49
DFFB-202ENST00000339350 RSPO2Q6UXX9 243 aaPredicted RBP12□□□□□ -0.49
DFFB-202ENST00000339350 NLRC3Q7RTR2 1065 aa12□□□□□ -0.49
DFFB-202ENST00000339350 C11orf24Q96F05 449 aaPredicted RBP12□□□□□ -0.49
DFFB-202ENST00000339350 LRRC46Q96FV0 321 aa12□□□□□ -0.49
DFFB-202ENST00000339350 DIRAS2Q96HU8 199 aa12□□□□□ -0.49
DFFB-202ENST00000339350 TMEM175Q9BSA9 504 aa12□□□□□ -0.49
DFFB-202ENST00000339350 BTBD1Q9H0C5 482 aa12□□□□□ -0.49
DFFB-202ENST00000339350 MED28Q9H204 178 aa12□□□□□ -0.49
DFFB-202ENST00000339350 MVB12BQ9H7P6 319 aa12□□□□□ -0.49
DFFB-202ENST00000339350 LRTM1Q9HBL6 345 aa12□□□□□ -0.49
DFFB-202ENST00000339350 RBFOX1Q9NWB1 397 aaKnown RBP12□□□□□ -0.49
DFFB-202ENST00000339350 NDRG3Q9UGV2 375 aa12□□□□□ -0.49
DFFB-202ENST00000339350 PCDHB8Q9UN66 801 aa12□□□□□ -0.49
DFFB-202ENST00000339350 FCF1Q9Y324 198 aaKnown RBP12□□□□□ -0.49
DFFB-202ENST00000339350 CCL27Q9Y4X3 112 aa12□□□□□ -0.49
DFFB-202ENST00000339350 INMT-MINDY4F8WBC2 141 aa11.99□□□□□ -0.49
DFFB-202ENST00000339350 WBP4O75554 376 aaKnown RBP11.99□□□□□ -0.49
DFFB-202ENST00000339350 PTHP01270 115 aa11.99□□□□□ -0.49
DFFB-202ENST00000339350 CBR1P16152 277 aa11.99□□□□□ -0.49
DFFB-202ENST00000339350 AQP1P29972 269 aa11.99□□□□□ -0.49
DFFB-202ENST00000339350 SLC19A1P41440 591 aa11.99□□□□□ -0.49
DFFB-202ENST00000339350 ZNF528Q3MIS6 628 aa11.99□□□□□ -0.49
DFFB-202ENST00000339350 ARMC12Q5T9G4 340 aa11.99□□□□□ -0.49
DFFB-202ENST00000339350 ENTHD1Q8IYW4 607 aa11.99□□□□□ -0.49
DFFB-202ENST00000339350 SKA2Q8WVK7 121 aaPredicted RBP11.99□□□□□ -0.49
DFFB-202ENST00000339350 KCNJ9Q92806 393 aa11.99□□□□□ -0.49
DFFB-202ENST00000339350 NARS2Q96I59 477 aaKnown RBP11.99□□□□□ -0.49
DFFB-202ENST00000339350 EBPLQ9BY08 206 aa11.99□□□□□ -0.49
DFFB-202ENST00000339350 NUDT4Q9NZJ9 180 aa11.99□□□□□ -0.49
DFFB-202ENST00000339350 CMAHPQ9Y471 501 aa11.99□□□□□ -0.49
DFFB-202ENST00000339350 PCDHGB7Q9Y5F8 929 aa11.99□□□□□ -0.49
DFFB-202ENST00000339350 PRUNE2Q8WUY3 3088 aa11.99□□□□□ -0.49
DFFB-202ENST00000339350 VWA8A3KMH1 1905 aa11.99□□□□□ -0.49
DFFB-202ENST00000339350 M0R233 179 aa11.99□□□□□ -0.49
DFFB-202ENST00000339350 GPR37O15354 613 aa11.99□□□□□ -0.49
DFFB-202ENST00000339350 RGS14O43566 566 aa11.99□□□□□ -0.49
DFFB-202ENST00000339350 AKAP8O43823 692 aaKnown RBP11.99□□□□□ -0.49
DFFB-202ENST00000339350 TGM6O95932 706 aa11.99□□□□□ -0.49
DFFB-202ENST00000339350 RHOCP08134 193 aa11.99□□□□□ -0.49
DFFB-202ENST00000339350 BCKDHAP12694 445 aa11.99□□□□□ -0.49
DFFB-202ENST00000339350 LHCGRP22888 699 aa11.99□□□□□ -0.49
DFFB-202ENST00000339350 S100PP25815 95 aa11.99□□□□□ -0.49
DFFB-202ENST00000339350 NNMTP40261 264 aa11.99□□□□□ -0.49
DFFB-202ENST00000339350 CLLU1OSQ5K130 101 aa11.99□□□□□ -0.49
DFFB-202ENST00000339350 RNF219Q5W0B1 726 aaPredicted RBP11.99□□□□□ -0.49
DFFB-202ENST00000339350 CAPN13Q6MZZ7 669 aaPredicted RBP11.99□□□□□ -0.49
DFFB-202ENST00000339350 SLC34A3Q8N130 599 aa11.99□□□□□ -0.49
DFFB-202ENST00000339350 C19orf18Q8NEA5 215 aa11.99□□□□□ -0.49
DFFB-202ENST00000339350 OR11H7Q8NGC8 314 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms