RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 ACBD4Q8NC06 268 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 GLIS3Q8NEA6 775 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 ARMC5Q96C12 935 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 TAAR9Q96RI9 348 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 CDC6Q99741 560 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 UBQLN3Q9H347 655 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 PCIF1Q9H4Z3 704 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 SMPD4Q9NXE4 827 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 LIMD1Q9UGP4 676 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 ADAMTS5Q9UNA0 930 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 PCDHA9Q9Y5H5 950 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 IRAK3Q9Y616 596 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 TRBV23-1A0A0A0MS06 115 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 HPP00738 406 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 GAAP10253 952 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 RCC1P18754 421 aaPredicted RBP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 MAP3K8P41279 467 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 RGS4P49798 205 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 PSMA6P60900 246 aaKnown RBP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 SLC7A9P82251 487 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 LDLRAD1Q5T700 205 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 LAPTM4BQ86VI4 370 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 CACUL1Q86Y37 369 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 DAW1Q8N136 415 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 ACBD7Q8N6N7 88 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 GPBAR1Q8TDU6 330 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 C2CD4CQ8TF44 421 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 SLC25A46Q96AG3 418 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 RGMAQ96B86 450 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 SLC41A3Q96GZ6 507 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 SENP5Q96HI0 755 aaPredicted RBP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 LCORQ96JN0 433 aaPredicted RBP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 HHIPQ96QV1 700 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 KCNA7Q96RP8 456 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 PPP1R16BQ96T49 567 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 AARSD1Q9BTE6 412 aaKnown RBP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 ALOXE3Q9BYJ1 711 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 JPH1Q9HDC5 661 aaPredicted RBP3.97□□□□□ -1.77
NEDD4-201ENST00000338963 ZFP64Q9NPA5 681 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 CRTAC1Q9NQ79 661 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 MAN2C1Q9NTJ4 1040 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 FBXO7Q9Y3I1 522 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 MTCH2Q9Y6C9 303 aa3.97□□□□□ -1.77
NEDD4-201ENST00000338963 A0A0A0MRY4 1105 aa3.96□□□□□ -1.77
NEDD4-201ENST00000338963 A0A1B0GUH1 482 aa3.96□□□□□ -1.77
NEDD4-201ENST00000338963 ANXA2P2A6NMY6 339 aa3.96□□□□□ -1.77
NEDD4-201ENST00000338963 B4E171 279 aa3.96□□□□□ -1.77
NEDD4-201ENST00000338963 ZNF587BE7ETH6 402 aa3.96□□□□□ -1.77
NEDD4-201ENST00000338963 SSX4O60224 188 aa3.96□□□□□ -1.77
NEDD4-201ENST00000338963 TFP02787 698 aa3.96□□□□□ -1.77
NEDD4-201ENST00000338963 FABP3P05413 133 aa3.96□□□□□ -1.77
NEDD4-201ENST00000338963 FHP07954 510 aa3.96□□□□□ -1.77
NEDD4-201ENST00000338963 UNGP13051 313 aaPredicted RBP3.96□□□□□ -1.77
NEDD4-201ENST00000338963 EPB42P16452 691 aa3.96□□□□□ -1.77
NEDD4-201ENST00000338963 MGMTP16455 207 aa3.96□□□□□ -1.77
NEDD4-201ENST00000338963 TBXA2RP21731 343 aa3.96□□□□□ -1.77
NEDD4-201ENST00000338963 WNT5AP41221 380 aa3.96□□□□□ -1.77
NEDD4-201ENST00000338963 PIGFQ07326 219 aa3.96□□□□□ -1.77
NEDD4-201ENST00000338963 SLC10A2Q12908 348 aaPredicted RBP3.96□□□□□ -1.77
NEDD4-201ENST00000338963 LCP2Q13094 533 aa3.96□□□□□ -1.77
NEDD4-201ENST00000338963 TRAM1Q15629 374 aa3.96□□□□□ -1.77
NEDD4-201ENST00000338963 CCDC85BQ15834 202 aaPredicted RBP3.96□□□□□ -1.77
NEDD4-201ENST00000338963 GALNTL5Q7Z4T8 443 aa3.96□□□□□ -1.77
NEDD4-201ENST00000338963 GPR149Q86SP6 731 aa3.96□□□□□ -1.77
NEDD4-201ENST00000338963 LDHDQ86WU2 507 aa3.96□□□□□ -1.77
NEDD4-201ENST00000338963 C1QL4Q86Z23 238 aa3.96□□□□□ -1.77
NEDD4-201ENST00000338963 SPATA13Q96N96 652 aa3.96□□□□□ -1.77
NEDD4-201ENST00000338963 SIGLEC11Q96RL6 698 aa3.96□□□□□ -1.77
NEDD4-201ENST00000338963 PHB2Q99623 299 aa3.96□□□□□ -1.77
NEDD4-201ENST00000338963 POLDIP3Q9BY77 421 aaKnown RBP3.96□□□□□ -1.77
NEDD4-201ENST00000338963 MTIF3Q9H2K0 278 aaKnown RBP3.96□□□□□ -1.77
NEDD4-201ENST00000338963 ENAMQ9NRM1 1142 aa3.96□□□□□ -1.77
NEDD4-201ENST00000338963 TRPC4Q9UBN4 977 aa3.96□□□□□ -1.77
NEDD4-201ENST00000338963 GDF2Q9UK05 429 aaPredicted RBP3.96□□□□□ -1.77
NEDD4-201ENST00000338963 ZNF225Q9UK10 706 aa3.96□□□□□ -1.77
NEDD4-201ENST00000338963 ZDHHC8Q9ULC8 765 aa3.96□□□□□ -1.77
NEDD4-201ENST00000338963 AAR2Q9Y312 384 aaKnown RBP3.96□□□□□ -1.77
NEDD4-201ENST00000338963 COQ4Q9Y3A0 265 aa3.96□□□□□ -1.77
NEDD4-201ENST00000338963 TMED3Q9Y3Q3 217 aa3.96□□□□□ -1.77
NEDD4-201ENST00000338963 FAM220BPB1ANY3 271 aa3.96□□□□□ -1.78
NEDD4-201ENST00000338963 BLOC1S5-TXNDC5H3BN57 136 aa3.96□□□□□ -1.78
NEDD4-201ENST00000338963 CLIC2O15247 247 aa3.96□□□□□ -1.78
NEDD4-201ENST00000338963 PLA2G10O15496 165 aa3.96□□□□□ -1.78
NEDD4-201ENST00000338963 SLC37A4O43826 429 aa3.96□□□□□ -1.78
NEDD4-201ENST00000338963 GPX5O75715 221 aa3.96□□□□□ -1.78
NEDD4-201ENST00000338963 SLC22A3O75751 556 aa3.96□□□□□ -1.78
NEDD4-201ENST00000338963 AP2A2O94973 939 aa3.96□□□□□ -1.78
NEDD4-201ENST00000338963 HDCP19113 662 aa3.96□□□□□ -1.78
NEDD4-201ENST00000338963 TACR3P29371 465 aa3.96□□□□□ -1.78
NEDD4-201ENST00000338963 SSTR2P30874 369 aa3.96□□□□□ -1.78
NEDD4-201ENST00000338963 MPIP34949 423 aa3.96□□□□□ -1.78
NEDD4-201ENST00000338963 LIMS1P48059 325 aa3.96□□□□□ -1.78
NEDD4-201ENST00000338963 CASP9P55211 416 aa3.96□□□□□ -1.78
NEDD4-201ENST00000338963 OR10A3P58181 314 aa3.96□□□□□ -1.78
NEDD4-201ENST00000338963 TAS2R40P59535 323 aa3.96□□□□□ -1.78
NEDD4-201ENST00000338963 NPRL3Q12980 569 aa3.96□□□□□ -1.78
NEDD4-201ENST00000338963 GTF2H3Q13889 308 aa3.96□□□□□ -1.78
NEDD4-201ENST00000338963 IRF4Q15306 451 aa3.96□□□□□ -1.78
NEDD4-201ENST00000338963 MPPED2Q15777 294 aa3.96□□□□□ -1.78
NEDD4-201ENST00000338963 ZDHHC20Q5W0Z9 365 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms