RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 ZBTB37Q5TC79 503 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 C3P1Q6ZMU1 363 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 HDDC3Q8N4P3 179 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 GGHQ92820 318 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 RAB8BQ92930 207 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 MNTQ99583 582 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 CACNG6Q9BXT2 260 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 ZNF436Q9C0F3 470 aaPredicted RBP15.36■□□□□ 0.05
NPHP3-201ENST00000337331 DUSP21Q9H596 190 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 GPN1Q9HCN4 374 aaPredicted RBP15.36■□□□□ 0.05
NPHP3-201ENST00000337331 CYB5R1Q9UHQ9 305 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 ACTL7AQ9Y615 435 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 A3GALT2U3KPV4 340 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 OR14I1A6ND48 311 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 RB1P06400 928 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 SRPRAP08240 638 aaKnown RBP15.36■□□□□ 0.05
NPHP3-201ENST00000337331 ACSL1P33121 698 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 PPP3R1P63098 170 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 TAZQ16635 292 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 SLC25A24Q6NUK1 477 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 ALKAL2Q6UX46 152 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 SERINC5Q86VE9 423 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 GLCCI1Q86VQ1 547 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 SLC30A8Q8IWU4 369 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 SMPDL3AQ92484 453 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 DCLRE1CQ96SD1 692 aaKnown RBP15.36■□□□□ 0.05
NPHP3-201ENST00000337331 CDCP1Q9H5V8 836 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 WDR26Q9H7D7 661 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 TDP1Q9NUW8 608 aa15.36■□□□□ 0.05
NPHP3-201ENST00000337331 A0A1B0GVC2 190 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 A6NIN4 97 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 TTLL8A6PVC2 850 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 ZNF30P17039 623 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 ACADLP28330 430 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 GRM7Q14831 915 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 PTGES3Q15185 160 aaKnown RBP15.35■□□□□ 0.05
NPHP3-201ENST00000337331 ZNF630Q2M218 657 aaPredicted RBP15.35■□□□□ 0.05
NPHP3-201ENST00000337331 C2orf27AQ580R0 203 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.35■□□□□ 0.05
NPHP3-201ENST00000337331 SLC28A3Q9HAS3 691 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 RBFOX1Q9NWB1 397 aaKnown RBP15.35■□□□□ 0.05
NPHP3-201ENST00000337331 IL36AQ9UHA7 158 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 HMGN1P05114 100 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 KDELR2P33947 212 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 PRMT2P55345 433 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 SEC13P55735 322 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 MEF2AQ02078 507 aaPredicted RBP15.35■□□□□ 0.05
NPHP3-201ENST00000337331 GPR50Q13585 617 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 FAM198BQ6UWH4 519 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 SLITRK4Q8IW52 837 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 ZFP41Q8N8Y5 198 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 WFIKKN2Q8TEU8 576 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 SMG9Q9H0W8 520 aaKnown RBP15.35■□□□□ 0.05
NPHP3-201ENST00000337331 KCNH6Q9H252 994 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 ZNF768Q9H5H4 540 aaKnown RBP15.35■□□□□ 0.05
NPHP3-201ENST00000337331 IGSF5Q9NSI5 407 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 MRTO4Q9UKD2 239 aaKnown RBP15.35■□□□□ 0.05
NPHP3-201ENST00000337331 GPR45Q9Y5Y3 372 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 TXNL1O43396 289 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 MMP20O60882 483 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 IFNA6P05013 189 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 ALDOBP05062 364 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 GALTP07902 379 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 PRSS56P0CW18 603 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 ZNF8P17098 575 aaPredicted RBP15.35■□□□□ 0.05
NPHP3-201ENST00000337331 SOX9P48436 509 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 TEKQ02763 1124 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 ABRAXAS2Q15018 415 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 LY6G5CQ5SRR4 150 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 ADNP2Q6IQ32 1131 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 PRSS58Q8IYP2 241 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 TSEN15Q8WW01 171 aaKnown RBP15.35■□□□□ 0.05
NPHP3-201ENST00000337331 S100PBPQ96BU1 408 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 CCDC115Q96NT0 180 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 MAPKAP1Q9BPZ7 522 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 TREM1Q9NP99 234 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 UTS2RQ9UKP6 389 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 INSL5Q9Y5Q6 135 aa15.35■□□□□ 0.05
NPHP3-201ENST00000337331 TYRP14679 529 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 CAV3P56539 151 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 GRIK2Q13002 908 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 NDUFA9Q16795 377 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 VMACQ2NL98 169 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 TMEM44Q2T9K0 475 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 KANSL1Q7Z3B3 1105 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 TCEANCQ8N8B7 351 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 OR5M11Q96RB7 305 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 CARS2Q9HA77 564 aaKnown RBP15.34■□□□□ 0.05
NPHP3-201ENST00000337331 CKLFQ9UBR5 152 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 STUB1Q9UNE7 303 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 C5P01031 1676 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 KRBOX1C9JBD0 128 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 TRIM3O75382 744 aaPredicted RBP15.34■□□□□ 0.05
NPHP3-201ENST00000337331 LASP1Q14847 261 aaKnown RBP15.34■□□□□ 0.05
NPHP3-201ENST00000337331 PYCR3Q53H96 274 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 ARL9Q6T311 187 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 SSX6Q7RTT6 188 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 TMEM80Q96HE8 168 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 OR2A14Q96R47 310 aa15.34■□□□□ 0.05
NPHP3-201ENST00000337331 GAL3ST4Q96RP7 486 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms