RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 CEBPEQ15744 281 aa15.43■□□□□ 0.06
SHOX-201ENST00000334060 IGF2-ASQ6U949 168 aa15.43■□□□□ 0.06
SHOX-201ENST00000334060 DLEU7Q6UYE1 221 aa15.43■□□□□ 0.06
SHOX-201ENST00000334060 OR2Y1Q8NGV0 311 aa15.43■□□□□ 0.06
SHOX-201ENST00000334060 FKBP10Q96AY3 582 aa15.43■□□□□ 0.06
SHOX-201ENST00000334060 NXPE2Q96DL1 559 aa15.43■□□□□ 0.06
SHOX-201ENST00000334060 ZNF570Q96NI8 536 aa15.43■□□□□ 0.06
SHOX-201ENST00000334060 TSC22D3Q99576 134 aa15.43■□□□□ 0.06
SHOX-201ENST00000334060 PAIP1Q9H074 479 aaKnown RBP15.43■□□□□ 0.06
SHOX-201ENST00000334060 VCXQ9H320 206 aa15.43■□□□□ 0.06
SHOX-201ENST00000334060 WDR41Q9HAD4 459 aa15.43■□□□□ 0.06
SHOX-201ENST00000334060 EHD3Q9NZN3 535 aa15.43■□□□□ 0.06
SHOX-201ENST00000334060 VAPAQ9P0L0 249 aa15.43■□□□□ 0.06
SHOX-201ENST00000334060 USP22Q9UPT9 525 aa15.43■□□□□ 0.06
SHOX-201ENST00000334060 FARSAQ9Y285 508 aaKnown RBP15.43■□□□□ 0.06
SHOX-201ENST00000334060 SPACA6W5XKT8 324 aa15.43■□□□□ 0.06
SHOX-201ENST00000334060 A0A1W2PP18 115 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.42■□□□□ 0.06
SHOX-201ENST00000334060 C9J4A7 227 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 CLPSP04118 112 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 IFNA16P05015 189 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 NT5EP21589 574 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 RPS6KA3P51812 740 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 NCALDP61601 193 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 SKP1P63208 163 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 DYNC1I2Q13409 638 aaKnown RBP15.42■□□□□ 0.06
SHOX-201ENST00000334060 C6orf10Q5SRN2 563 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 RINLQ6ZS11 566 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 PPP1R32Q7Z5V6 425 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 TANKQ92844 425 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 GATA6Q92908 595 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 BBS4Q96RK4 519 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 ZBTB18Q99592 522 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 BHLHE41Q9C0J9 482 aaPredicted RBP15.42■□□□□ 0.06
SHOX-201ENST00000334060 LIN28AQ9H9Z2 209 aaKnown RBP15.42■□□□□ 0.06
SHOX-201ENST00000334060 MAT2BQ9NZL9 334 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 SNX8Q9Y5X2 465 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 ATMQ13315 3056 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 BOD1L1Q8NFC6 3051 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 ACACAQ13085 2346 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 SOCS6O14544 535 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 TBX19O60806 448 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 GUCY1B2O75343 617 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 ALBP02768 609 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 LIPCP11150 499 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 PORP16435 677 aaPredicted RBP15.42■□□□□ 0.06
SHOX-201ENST00000334060 S1PR1P21453 382 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 MANFP55145 182 aaKnown RBP15.42■□□□□ 0.06
SHOX-201ENST00000334060 SLC25A3Q00325 362 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 PRICKLE4Q2TBC4 344 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 SFT2D3Q587I9 215 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 ZNF628Q5EBL2 1059 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 KIRREL2Q6UWL6 708 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 C16orf47Q6ZP98 133 aaPredicted RBP15.42■□□□□ 0.06
SHOX-201ENST00000334060 OLIG3Q7RTU3 272 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 LSRQ86X29 649 aaPredicted RBP15.42■□□□□ 0.06
SHOX-201ENST00000334060 LRRC25Q8N386 305 aaPredicted RBP15.42■□□□□ 0.06
SHOX-201ENST00000334060 KIF2BQ8N4N8 673 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 OR4A15Q8NGL6 344 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 SERHL2Q9H4I8 314 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 GPATCH2Q9NW75 528 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 ENTPD4Q9Y227 616 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 PCDHB14Q9Y5E9 798 aa15.42■□□□□ 0.06
SHOX-201ENST00000334060 PDLIM1O00151 329 aa15.41■□□□□ 0.06
SHOX-201ENST00000334060 CLDN4O14493 209 aa15.41■□□□□ 0.06
SHOX-201ENST00000334060 MRASO14807 208 aa15.41■□□□□ 0.06
SHOX-201ENST00000334060 CFLARO15519 480 aa15.41■□□□□ 0.06
SHOX-201ENST00000334060 NKX2-8O15522 239 aa15.41■□□□□ 0.06
SHOX-201ENST00000334060 HNRNPCL1O60812 293 aaKnown RBP15.41■□□□□ 0.06
SHOX-201ENST00000334060 SORBS2O94875 1100 aaKnown RBP15.41■□□□□ 0.06
SHOX-201ENST00000334060 CAPNS1P04632 268 aa15.41■□□□□ 0.06
SHOX-201ENST00000334060 IL6P05231 212 aa15.41■□□□□ 0.06
SHOX-201ENST00000334060 CSNK2A2P19784 350 aaPredicted RBP15.41■□□□□ 0.06
SHOX-201ENST00000334060 PTPN4P29074 926 aa15.41■□□□□ 0.06
SHOX-201ENST00000334060 SOX11P35716 441 aa15.41■□□□□ 0.06
SHOX-201ENST00000334060 SRSF11Q05519 484 aaKnown RBP15.41■□□□□ 0.06
SHOX-201ENST00000334060 MAPKAPK3Q16644 382 aa15.41■□□□□ 0.06
SHOX-201ENST00000334060 FAM91A1Q658Y4 838 aa15.41■□□□□ 0.06
SHOX-201ENST00000334060 NIPAL1Q6NVV3 410 aa15.41■□□□□ 0.06
SHOX-201ENST00000334060 ASRGL1Q7L266 308 aa15.41■□□□□ 0.06
SHOX-201ENST00000334060 R3HCC1LQ7Z5L2 792 aaKnown RBP15.41■□□□□ 0.06
SHOX-201ENST00000334060 GLB1L3Q8NCI6 653 aaPredicted RBP15.41■□□□□ 0.06
SHOX-201ENST00000334060 MTERF3Q96E29 417 aa15.41■□□□□ 0.06
SHOX-201ENST00000334060 DPH2Q9BQC3 489 aaPredicted RBP15.41■□□□□ 0.06
SHOX-201ENST00000334060 YIPF4Q9BSR8 244 aa15.41■□□□□ 0.06
SHOX-201ENST00000334060 CNPPD1Q9BV87 410 aa15.41■□□□□ 0.06
SHOX-201ENST00000334060 WDR54Q9H977 334 aa15.41■□□□□ 0.06
SHOX-201ENST00000334060 C14orf105Q9NVL8 296 aa15.41■□□□□ 0.06
SHOX-201ENST00000334060 ZNF223Q9UK11 482 aaPredicted RBP15.41■□□□□ 0.06
SHOX-201ENST00000334060 MRPS33Q9Y291 106 aaKnown RBP15.41■□□□□ 0.06
SHOX-201ENST00000334060 NDUFAF1Q9Y375 327 aa15.41■□□□□ 0.06
SHOX-201ENST00000334060 ZNF780BQ9Y6R6 833 aa15.41■□□□□ 0.06
SHOX-201ENST00000334060 PRSS51A0A1B0GVH4 220 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 C17orf105B2RV13 164 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 UPK1AO00322 258 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 CBX7O95931 251 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 SOAT1P35610 550 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 FOLR3P41439 243 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 NUDT2P50583 147 aa15.4■□□□□ 0.06
SHOX-201ENST00000334060 ZNF267Q14586 743 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms