RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 PCLAFQ15004 111 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 CTRB2Q6GPI1 263 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 NOXRED1Q6NXP6 359 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 SLAIN1Q8ND83 568 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 RCBTB1Q8NDN9 531 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 OR6K2Q8NGY2 324 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 FAM84BQ96KN1 310 aaPredicted RBP9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 SLC25A32Q9H2D1 315 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 CNTN3Q9P232 1028 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 WIF1Q9Y5W5 379 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 CCL15-CCL14A0A0B4J2E2 113 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 ZBTB7AO95365 584 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 SPI1P17947 270 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 BDKRB2P30411 391 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 H3F3AP84243 136 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 SF3B4Q15427 424 aaKnown RBP eCLIP9.93□□□□□ -0.821e-6■■■■□ 24.4
SPTBN1-201ENST00000333896 GPR68Q15743 365 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 CCL15Q16663 113 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 OR2A12Q8NGT7 310 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 SCARB1Q8WTV0 552 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 AKTIPQ9H8T0 292 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 RLIMQ9NVW2 624 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 CYB5R1Q9UHQ9 305 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 TIAM2Q8IVF5 1701 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 RPS10-NUDT3A0A1W2PQS6 291 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 SCDO00767 359 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 ATP5A1P25705 553 aaKnown RBP9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 GCAP28676 217 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 RPS10P46783 165 aaKnown RBP9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 ELAVL2Q12926 359 aaKnown RBP9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 TCEAL1Q15170 157 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 ENTHD1Q8IYW4 607 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 MS4A15Q8N5U1 240 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 ZBTB2Q8N680 514 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 FAM83FQ8NEG4 500 aaPredicted RBP9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 PINK1Q9BXM7 581 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 E7ESA3 106 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 RPP40O75818 363 aaKnown RBP9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 DIRAS1O95057 198 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 CD1EP15812 388 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 RPL7AP62424 266 aaKnown RBP9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 MEF2DQ14814 521 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 TEX44Q53QW1 395 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 OR4C5Q8NGB2 326 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 OR8D1Q8WZ84 308 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 MUL1Q969V5 352 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 MRM3Q9HC36 420 aaKnown RBP9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 ITM2CQ9NQX7 267 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 FAM120CQ9NX05 1096 aaKnown RBP9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 KCNK2O95069 426 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 ICAM1P05362 532 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 BTG1P62324 171 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 CHRNEQ04844 493 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 SLC25A52Q3SY17 297 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 AWAT2Q6E213 333 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 OR13C3Q8NGS6 347 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 CHTF18Q8WVB6 975 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 PKIBQ9C010 78 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.92□□□□□ -0.827e-7■■■□□ 15.6
SPTBN1-201ENST00000333896 TMPRSS11EQ9UL52 423 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 LAMB4A4D0S4 1761 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 LOC285095A0A1B0GVY8 99 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 TMEM72A0PK05 275 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 B3GALT2O43825 422 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 GPR143P51810 404 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 CLRN1P58418 232 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 EPYCQ99645 322 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 SNRNP25Q9BV90 132 aaKnown RBP9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 MRPL17Q9NRX2 175 aaKnown RBP9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 ZNF780AO75290 641 aaPredicted RBP9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 SLC35G6P0C7Q6 338 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 NAT2P11245 290 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 HNF1AP20823 631 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 PXDC1Q5TGL8 231 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 INTS5Q6P9B9 1019 aaKnown RBP9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 ADIPOR2Q86V24 386 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 EID2Q8N6I1 236 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 GLOD4Q9HC38 313 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 PCDHA2Q9Y5H9 948 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 RNF215Q9Y6U7 377 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 ARFGEF3Q5TH69 2177 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 A0A087WZY1 265 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 ALDOBP05062 364 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 AQP2P41181 271 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 RIDAP52758 137 aaKnown RBP9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 NUDT6P53370 316 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 RHBDL3P58872 404 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 PLGLAQ15195 96 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 PPM1JQ5JR12 505 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 CD276Q5ZPR3 534 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 C22orf42Q6IC83 251 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 METTL7BQ6UX53 244 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 GALNT10Q86SR1 603 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 AKR7LQ8NHP1 331 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 MED18Q9BUE0 208 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 ISCA1Q9BUE6 129 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 TSSK6Q9BXA6 273 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 HAO2Q9NYQ3 351 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 SLC15A5A6NIM6 579 aa9.92□□□□□ -0.82
SPTBN1-201ENST00000333896 AGPAT2O15120 278 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms