RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 MMABQ96EY8 250 aaPredicted RBP9.16□□□□□ -0.94
SYN3-201ENST00000332840 ITCHQ96J02 903 aa9.16□□□□□ -0.94
SYN3-201ENST00000332840 EGLN2Q96KS0 407 aa9.16□□□□□ -0.94
SYN3-201ENST00000332840 OR52E6Q96RD3 313 aa9.16□□□□□ -0.94
SYN3-201ENST00000332840 YIPF2Q9BWQ6 316 aa9.16□□□□□ -0.94
SYN3-201ENST00000332840 RNPEPL1Q9HAU8 725 aa9.16□□□□□ -0.94
SYN3-201ENST00000332840 ANKHQ9HCJ1 492 aa9.16□□□□□ -0.94
SYN3-201ENST00000332840 ABCD2Q9UBJ2 740 aa9.16□□□□□ -0.94
SYN3-201ENST00000332840 CD300AQ9UGN4 299 aa9.16□□□□□ -0.94
SYN3-201ENST00000332840 C3orf18Q9UK00 162 aa9.16□□□□□ -0.94
SYN3-201ENST00000332840 AP3M1Q9Y2T2 418 aa9.16□□□□□ -0.94
SYN3-201ENST00000332840 WBP11Q9Y2W2 641 aaKnown RBP9.16□□□□□ -0.94
SYN3-201ENST00000332840 L3MBTL1Q9Y468 752 aa9.16□□□□□ -0.94
SYN3-201ENST00000332840 HS3ST3B1Q9Y662 390 aa9.16□□□□□ -0.94
SYN3-201ENST00000332840 SNRNP200O75643 2136 aaKnown RBP9.16□□□□□ -0.94
SYN3-201ENST00000332840 A0A0A6YYC8 382 aaPredicted RBP9.15□□□□□ -0.94
SYN3-201ENST00000332840 A0A1W2PQ72 361 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 I3L1I5 382 aaPredicted RBP9.15□□□□□ -0.94
SYN3-201ENST00000332840 FXYD1O00168 92 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 P2RX6O15547 441 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 NDUFS4O43181 175 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 AKAP10O43572 662 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 ERN1O75460 977 aaKnown RBP9.15□□□□□ -0.94
SYN3-201ENST00000332840 LRATO95237 230 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 PSMG1O95456 288 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 HPP00738 406 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 HEXBP07686 556 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 COX7A2P14406 83 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 DDX5P17844 614 aaKnown RBP9.15□□□□□ -0.94
SYN3-201ENST00000332840 SLC6A2P23975 617 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 KIR3DL1P43629 444 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 GSTM5P46439 218 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 TRPC1P48995 793 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 ARFIP1P53367 373 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 EMP2P54851 167 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 EEFSECP57772 596 aaKnown RBP9.15□□□□□ -0.94
SYN3-201ENST00000332840 CHAF1BQ13112 559 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 TRIM25Q14258 630 aaKnown RBP9.15□□□□□ -0.94
SYN3-201ENST00000332840 PGS1Q32NB8 556 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 TMEM35AQ53FP2 167 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 FAM69BQ5VUD6 431 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 HIST2H2BCQ6DN03 193 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 AAGABQ6PD74 315 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 DLEU7Q6UYE1 221 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 AMER3Q8N944 861 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 SRFBP1Q8NEF9 429 aaKnown RBP9.15□□□□□ -0.94
SYN3-201ENST00000332840 VPS37AQ8NEZ2 397 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 OR8J2Q8NGG1 315 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 CDC26Q8NHZ8 85 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 DNAJB14Q8TBM8 379 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 CREB3L4Q8TEY5 395 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 C16orf78Q8WTQ4 265 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.15□□□□□ -0.94
SYN3-201ENST00000332840 METTL21AQ8WXB1 218 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 TMEM125Q96AQ2 219 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 CCDC124Q96CT7 223 aaKnown RBP9.15□□□□□ -0.94
SYN3-201ENST00000332840 TM4SF19Q96DZ7 209 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 MTERF3Q96E29 417 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 OR1F2PQ96R84 312 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 F2RL3Q96RI0 385 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 CGREF1Q99674 301 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 SMAD5Q99717 465 aaKnown RBP9.15□□□□□ -0.94
SYN3-201ENST00000332840 SH3GL1Q99961 368 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 SOX17Q9H6I2 414 aaPredicted RBP9.15□□□□□ -0.94
SYN3-201ENST00000332840 MYNNQ9NPC7 610 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 FAM120CQ9NX05 1096 aaKnown RBP9.15□□□□□ -0.94
SYN3-201ENST00000332840 SUCOQ9UBS9 1254 aaKnown RBP9.15□□□□□ -0.94
SYN3-201ENST00000332840 C19orf25Q9UFG5 118 aaPredicted RBP9.15□□□□□ -0.94
SYN3-201ENST00000332840 ATP6V1HQ9UI12 483 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 FBXL4Q9UKA2 621 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 ADAM29Q9UKF5 820 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 PACSIN3Q9UKS6 424 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 PCDHA9Q9Y5H5 950 aa9.15□□□□□ -0.94
SYN3-201ENST00000332840 MDC1Q14676 2089 aaKnown RBP9.15□□□□□ -0.94
SYN3-201ENST00000332840 A0A096LPI6 279 aa9.14□□□□□ -0.95
SYN3-201ENST00000332840 ARHGAP10A1A4S6 786 aa9.14□□□□□ -0.95
SYN3-201ENST00000332840 PRORSD1PA6NEY8 169 aa9.14□□□□□ -0.95
SYN3-201ENST00000332840 IDSB3KWA1 339 aa9.14□□□□□ -0.95
SYN3-201ENST00000332840 SAP18O00422 153 aaKnown RBP9.14□□□□□ -0.95
SYN3-201ENST00000332840 NME4O00746 187 aa9.14□□□□□ -0.95
SYN3-201ENST00000332840 PLPP1O14494 284 aa9.14□□□□□ -0.95
SYN3-201ENST00000332840 SCAMP2O15127 329 aaKnown RBP9.14□□□□□ -0.95
SYN3-201ENST00000332840 FOXS1O43638 330 aa9.14□□□□□ -0.95
SYN3-201ENST00000332840 DNAJA2O60884 412 aa9.14□□□□□ -0.95
SYN3-201ENST00000332840 BCAS2O75934 225 aaPredicted RBP9.14□□□□□ -0.95
SYN3-201ENST00000332840 SORBS2O94875 1100 aaKnown RBP9.14□□□□□ -0.95
SYN3-201ENST00000332840 MED26O95402 600 aa9.14□□□□□ -0.95
SYN3-201ENST00000332840 TBX6O95947 436 aaPredicted RBP9.14□□□□□ -0.95
SYN3-201ENST00000332840 SERPIND1P05546 499 aa9.14□□□□□ -0.95
SYN3-201ENST00000332840 KLK1P06870 262 aa9.14□□□□□ -0.95
SYN3-201ENST00000332840 ICAM2P13598 275 aa9.14□□□□□ -0.95
SYN3-201ENST00000332840 HSD17B1P14061 328 aa9.14□□□□□ -0.95
SYN3-201ENST00000332840 ALOX12P18054 663 aa9.14□□□□□ -0.95
SYN3-201ENST00000332840 ZNF10P21506 573 aaPredicted RBP9.14□□□□□ -0.95
SYN3-201ENST00000332840 ITGA3P26006 1051 aa9.14□□□□□ -0.95
SYN3-201ENST00000332840 HNRNPH1P31943 449 aaKnown RBP9.14□□□□□ -0.95
SYN3-201ENST00000332840 BSGP35613 385 aa9.14□□□□□ -0.95
SYN3-201ENST00000332840 STXBP1P61764 594 aaKnown RBP9.14□□□□□ -0.95
SYN3-201ENST00000332840 TRA2BP62995 288 aaKnown RBP9.14□□□□□ -0.95
SYN3-201ENST00000332840 PHC1P78364 1004 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms