RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 SEMA7AO75326 666 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 AIFM1O95831 613 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 GASTP01350 101 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 ACADMP11310 421 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 PTGER1P34995 402 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 ST13P50502 369 aaKnown RBP16.44■□□□□ 0.22
DDX28-201ENST00000332395 RAB8AP61006 207 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 NR1D2Q14995 579 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 MLIPQ5VWP3 458 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 ZNF770Q6IQ21 691 aaPredicted RBP16.44■□□□□ 0.22
DDX28-201ENST00000332395 TCTN3Q6NUS6 607 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 SLC15A4Q8N697 577 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 SRFBP1Q8NEF9 429 aaKnown RBP16.44■□□□□ 0.22
DDX28-201ENST00000332395 DENND6BQ8NEG7 585 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 TSACCQ96A04 125 aaPredicted RBP16.44■□□□□ 0.22
DDX28-201ENST00000332395 CNRIP1Q96F85 164 aaPredicted RBP16.44■□□□□ 0.22
DDX28-201ENST00000332395 WDR92Q96MX6 357 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 BCL7BQ9BQE9 202 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 COPS4Q9BT78 406 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 ZNF226Q9NYT6 803 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 APOBEC3BQ9UH17 382 aaKnown RBP16.44■□□□□ 0.22
DDX28-201ENST00000332395 PSORS1C1Q9UIG5 152 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 ITGB1BP2Q9UKP3 347 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 ERGIC3Q9Y282 383 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 CORINQ9Y5Q5 1042 aa16.44■□□□□ 0.22
DDX28-201ENST00000332395 GOLGA4Q13439 2230 aaKnown RBP16.44■□□□□ 0.22
DDX28-201ENST00000332395 FAM227AF5H4B4 570 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 J3QRK9 145 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 NR2F1P10589 423 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 ALPPL2P10696 532 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 NDUFS1P28331 727 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 ACSL1P33121 698 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 GPR19Q15760 415 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 C18orf63Q68DL7 685 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 KLHL17Q6TDP4 642 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 TMEM64Q6YI46 380 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 DNAJC22Q8N4W6 341 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 CCL4L1Q8NHW4 92 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 VANGL1Q8TAA9 524 aaPredicted RBP16.43■□□□□ 0.22
DDX28-201ENST00000332395 SUN3Q8TAQ9 357 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 SEMA3GQ9NS98 782 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 ZNF624Q9P2J8 865 aaPredicted RBP16.43■□□□□ 0.22
DDX28-201ENST00000332395 KLF15Q9UIH9 416 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 GPC6Q9Y625 555 aaPredicted RBP16.43■□□□□ 0.22
DDX28-201ENST00000332395 PIAS3Q9Y6X2 628 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 BTN3A3O00478 584 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 CLPXO76031 633 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 ASGR2P07307 311 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 GABRB1P18505 474 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 PPP2R1BP30154 601 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 TSFMP43897 325 aaKnown RBP16.43■□□□□ 0.22
DDX28-201ENST00000332395 KHKP50053 298 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 PRKAG1P54619 331 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 DUSP2Q05923 314 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 PTGES3Q15185 160 aaKnown RBP16.43■□□□□ 0.22
DDX28-201ENST00000332395 RGS21Q2M5E4 152 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 ZNF750Q32MQ0 723 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 TJAP1Q5JTD0 557 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 KIAA1324Q6UXG2 1013 aaKnown RBP16.43■□□□□ 0.22
DDX28-201ENST00000332395 DEF8Q6ZN54 512 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 P2RY8Q86VZ1 359 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 RBM45Q8IUH3 476 aaKnown RBP16.43■□□□□ 0.22
DDX28-201ENST00000332395 CCDC116Q8IYX3 515 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 OR4D11Q8NGI4 311 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 BMFQ96LC9 184 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 MAPKAP1Q9BPZ7 522 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 ARMC7Q9H6L4 198 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 AMBNQ9NP70 447 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 TRNAU1APQ9NX07 287 aaKnown RBP16.43■□□□□ 0.22
DDX28-201ENST00000332395 IMPAD1Q9NX62 359 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 CLDND1Q9NY35 253 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 ENTPD4Q9Y227 616 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 NINQ8N4C6 2090 aa16.43■□□□□ 0.22
DDX28-201ENST00000332395 OR2A25A4D2G3 310 aa16.42■□□□□ 0.22
DDX28-201ENST00000332395 ACTR1BP42025 376 aa16.42■□□□□ 0.22
DDX28-201ENST00000332395 ACTR1AP61163 376 aa16.42■□□□□ 0.22
DDX28-201ENST00000332395 STXBP1P61764 594 aaKnown RBP16.42■□□□□ 0.22
DDX28-201ENST00000332395 TEKQ02763 1124 aa16.42■□□□□ 0.22
DDX28-201ENST00000332395 SLC48A1Q6P1K1 146 aa16.42■□□□□ 0.22
DDX28-201ENST00000332395 SFXN5Q8TD22 340 aa16.42■□□□□ 0.22
DDX28-201ENST00000332395 OTUB1Q96FW1 271 aaPredicted RBP16.42■□□□□ 0.22
DDX28-201ENST00000332395 WFDC6Q9BQY6 131 aa16.42■□□□□ 0.22
DDX28-201ENST00000332395 KCNK12Q9HB15 430 aa16.42■□□□□ 0.22
DDX28-201ENST00000332395 CES1P1Q9UKY3 287 aa16.42■□□□□ 0.22
DDX28-201ENST00000332395 PCOLCE2Q9UKZ9 415 aa16.42■□□□□ 0.22
DDX28-201ENST00000332395 TMCC3Q9ULS5 477 aa16.42■□□□□ 0.22
DDX28-201ENST00000332395 CLCA1A8K7I4 914 aa16.41■□□□□ 0.22
DDX28-201ENST00000332395 LCKP06239 509 aa16.41■□□□□ 0.22
DDX28-201ENST00000332395 C8orf89P0DMQ9 161 aa16.41■□□□□ 0.22
DDX28-201ENST00000332395 F3P13726 295 aa16.41■□□□□ 0.22
DDX28-201ENST00000332395 NDUFV2P19404 249 aa16.41■□□□□ 0.22
DDX28-201ENST00000332395 DRD1P21728 446 aa16.41■□□□□ 0.22
DDX28-201ENST00000332395 ELAVL4P26378 380 aaKnown RBP16.41■□□□□ 0.22
DDX28-201ENST00000332395 C21orf33P30042 268 aaPredicted RBP16.41■□□□□ 0.22
DDX28-201ENST00000332395 FEN1P39748 380 aaKnown RBP16.41■□□□□ 0.22
DDX28-201ENST00000332395 CTSKP43235 329 aa16.41■□□□□ 0.22
DDX28-201ENST00000332395 NUDT6P53370 316 aa16.41■□□□□ 0.22
DDX28-201ENST00000332395 MLLT10P55197 1068 aa16.41■□□□□ 0.22
DDX28-201ENST00000332395 LASP1Q14847 261 aaKnown RBP16.41■□□□□ 0.22
DDX28-201ENST00000332395 UBE2UQ5VVX9 321 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms