RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 VMP1Q96GC9 406 aa14.95□□□□□ -0.02
LRRC28-202ENST00000331450 AMDHD1Q96NU7 426 aa14.95□□□□□ -0.02
LRRC28-202ENST00000331450 BBS4Q96RK4 519 aa14.95□□□□□ -0.02
LRRC28-202ENST00000331450 BHLHE41Q9C0J9 482 aaPredicted RBP14.95□□□□□ -0.02
LRRC28-202ENST00000331450 ACSS1Q9NUB1 689 aaPredicted RBP14.95□□□□□ -0.02
LRRC28-202ENST00000331450 ATAD3AQ9NVI7 634 aa14.95□□□□□ -0.02
LRRC28-202ENST00000331450 ZNF639Q9UID6 485 aa14.95□□□□□ -0.02
LRRC28-202ENST00000331450 G3BP2Q9UN86 482 aaKnown RBP14.95□□□□□ -0.02
LRRC28-202ENST00000331450 COPG1Q9Y678 874 aaKnown RBP14.95□□□□□ -0.02
LRRC28-202ENST00000331450 TNRC6AQ8NDV7 1962 aaKnown RBP14.94□□□□□ -0.02
LRRC28-202ENST00000331450 IFI6P09912 130 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 ITGAMP11215 1152 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 DDX5P17844 614 aaKnown RBP14.94□□□□□ -0.02
LRRC28-202ENST00000331450 TNNI3P19429 210 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 S1PR1P21453 382 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 NT5EP21589 574 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 MPIP34949 423 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 PGDP52209 483 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 ARFIP2P53365 341 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 NME5P56597 212 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 WNT3P56703 355 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 AP2B1P63010 937 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 PHC1P78364 1004 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 MLC1Q15049 377 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 SPANXN4Q5MJ08 99 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 CPTPQ5TA50 214 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 H3F3CQ6NXT2 135 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 FAM111BQ6SJ93 734 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 MIER2Q8N344 545 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 VWA5B2Q8N398 1253 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 GALNT16Q8N428 558 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 KIF2BQ8N4N8 673 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 NATD1Q8N6N6 113 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 GLB1L3Q8NCI6 653 aaPredicted RBP14.94□□□□□ -0.02
LRRC28-202ENST00000331450 OR9I1Q8NGQ6 314 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 OR9A2Q8NGT5 310 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 EXTL1Q92935 676 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 NCLNQ969V3 563 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 ZBED6CLQ96FA7 236 aaPredicted RBP14.94□□□□□ -0.02
LRRC28-202ENST00000331450 SENP5Q96HI0 755 aaPredicted RBP14.94□□□□□ -0.02
LRRC28-202ENST00000331450 ART5Q96L15 291 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 RILPQ96NA2 401 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 PRPF18Q99633 342 aaKnown RBP14.94□□□□□ -0.02
LRRC28-202ENST00000331450 DUSP26Q9BV47 211 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 NUDT9Q9BW91 350 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 OR8D2Q9GZM6 311 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 LHPPQ9H008 270 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 NSRP1Q9H0G5 558 aaKnown RBP14.94□□□□□ -0.02
LRRC28-202ENST00000331450 ADAM21Q9UKJ8 722 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 ERVK-19Q9WJR5 959 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 EXPH5Q8NEV8 1989 aa14.94□□□□□ -0.02
LRRC28-202ENST00000331450 DSPP15924 2871 aaKnown RBP14.94□□□□□ -0.02
LRRC28-202ENST00000331450 MGAQ8IWI9 3026 aa14.93□□□□□ -0.02
LRRC28-202ENST00000331450 C9JVG2 144 aa14.93□□□□□ -0.02
LRRC28-202ENST00000331450 DYRK3O43781 588 aa14.93□□□□□ -0.02
LRRC28-202ENST00000331450 SCN2BO60939 215 aa14.93□□□□□ -0.02
LRRC28-202ENST00000331450 SLITRK5O94991 958 aa14.93□□□□□ -0.02
LRRC28-202ENST00000331450 KIR3DL1P43629 444 aa14.93□□□□□ -0.02
LRRC28-202ENST00000331450 NCBP2P52298 156 aaKnown RBP eCLIP14.93□□□□□ -0.02
LRRC28-202ENST00000331450 SLC37A1P57057 533 aa14.93□□□□□ -0.02
LRRC28-202ENST00000331450 SRSF11Q05519 484 aaKnown RBP14.93□□□□□ -0.02
LRRC28-202ENST00000331450 SF3A3Q12874 501 aaKnown RBP eCLIP14.93□□□□□ -0.02
LRRC28-202ENST00000331450 ZNF267Q14586 743 aaPredicted RBP14.93□□□□□ -0.02
LRRC28-202ENST00000331450 MYBPC3Q14896 1274 aa14.93□□□□□ -0.02
LRRC28-202ENST00000331450 RPS6KA2Q15349 733 aa14.93□□□□□ -0.02
LRRC28-202ENST00000331450 LINC00303Q3SY05 128 aa14.93□□□□□ -0.02
LRRC28-202ENST00000331450 FAM174BQ3ZCQ3 159 aa14.93□□□□□ -0.02
LRRC28-202ENST00000331450 FHL5Q5TD97 284 aa14.93□□□□□ -0.02
LRRC28-202ENST00000331450 JMJD6Q6NYC1 403 aaPredicted RBP14.93□□□□□ -0.02
LRRC28-202ENST00000331450 ZNF551Q7Z340 670 aaPredicted RBP14.93□□□□□ -0.02
LRRC28-202ENST00000331450 SPATA21Q7Z572 469 aa14.93□□□□□ -0.02
LRRC28-202ENST00000331450 ARMC10Q8N2F6 343 aa14.93□□□□□ -0.02
LRRC28-202ENST00000331450 ADCY4Q8NFM4 1077 aa14.93□□□□□ -0.02
LRRC28-202ENST00000331450 ZFP28Q8NHY6 868 aa14.93□□□□□ -0.02
LRRC28-202ENST00000331450 DOK4Q8TEW6 326 aa14.93□□□□□ -0.02
LRRC28-202ENST00000331450 ERP27Q96DN0 273 aa14.93□□□□□ -0.02
LRRC28-202ENST00000331450 THOC3Q96J01 351 aaKnown RBP14.93□□□□□ -0.02
LRRC28-202ENST00000331450 CNPPD1Q9BV87 410 aa14.93□□□□□ -0.02
LRRC28-202ENST00000331450 TRIM33Q9UPN9 1127 aa14.93□□□□□ -0.02
LRRC28-202ENST00000331450 LAMA5O15230 3695 aa14.92□□□□□ -0.02
LRRC28-202ENST00000331450 TRBV11-1A0A0K0K1C0 115 aa14.92□□□□□ -0.02
LRRC28-202ENST00000331450 PLOD2O00469 737 aa14.92□□□□□ -0.02
LRRC28-202ENST00000331450 PRKNO60260 465 aaPredicted RBP14.92□□□□□ -0.02
LRRC28-202ENST00000331450 SNX3O60493 162 aa14.92□□□□□ -0.02
LRRC28-202ENST00000331450 PLOD3O60568 738 aa14.92□□□□□ -0.02
LRRC28-202ENST00000331450 SLC22A3O75751 556 aa14.92□□□□□ -0.02
LRRC28-202ENST00000331450 CBX7O95931 251 aa14.92□□□□□ -0.02
LRRC28-202ENST00000331450 ITGA3P26006 1051 aa14.92□□□□□ -0.02
LRRC28-202ENST00000331450 SSTR4P31391 388 aa14.92□□□□□ -0.02
LRRC28-202ENST00000331450 SOX11P35716 441 aa14.92□□□□□ -0.02
LRRC28-202ENST00000331450 CLCN2P51788 898 aa14.92□□□□□ -0.02
LRRC28-202ENST00000331450 POLE2P56282 527 aa14.92□□□□□ -0.02
LRRC28-202ENST00000331450 STX1BP61266 288 aa14.92□□□□□ -0.02
LRRC28-202ENST00000331450 MRPS35P82673 323 aaKnown RBP14.92□□□□□ -0.02
LRRC28-202ENST00000331450 RHDQ02161 417 aa14.92□□□□□ -0.02
LRRC28-202ENST00000331450 DUSP8Q13202 625 aa14.92□□□□□ -0.02
LRRC28-202ENST00000331450 SQLEQ14534 574 aa14.92□□□□□ -0.02
LRRC28-202ENST00000331450 TRMT12Q53H54 448 aaKnown RBP14.92□□□□□ -0.02
LRRC28-202ENST00000331450 C6orf163Q5TEZ5 329 aa14.92□□□□□ -0.02
LRRC28-202ENST00000331450 OR4F3Q6IEY1 312 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms