RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 TOGARAM1Q9Y4F4 1720 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 OR2A25A4D2G3 310 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 ELOA3DA6NLF2 546 aaPredicted RBP13.4□□□□□ -0.26
EPHB3-201ENST00000330394 ONECUT3O60422 494 aaPredicted RBP13.4□□□□□ -0.26
EPHB3-201ENST00000330394 AMD1P17707 334 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 CD9P21926 228 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 ELOA3BQ3SY89 546 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 PAQR7Q86WK9 346 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.4□□□□□ -0.26
EPHB3-201ENST00000330394 ZNF557Q8N988 423 aaPredicted RBP13.4□□□□□ -0.26
EPHB3-201ENST00000330394 ELOA3Q8NG57 546 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 OR51L1Q8NGJ5 315 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 S100A13Q99584 98 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 EXO5Q9H790 373 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 TMEM98Q9Y2Y6 226 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 ALG5Q9Y673 324 aa13.4□□□□□ -0.26
EPHB3-201ENST00000330394 RP1P56715 2156 aa13.4□□□□□ -0.27
EPHB3-201ENST00000330394 KANTRA0A1W2PQU2 76 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 C1QTNF3-AMACRE9PGA6 284 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 RFPL3O75679 317 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 UQCRC2P22695 453 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 CHMP24386 653 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 ADH7P40394 386 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 OR3A3P47888 321 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 TBPL1P62380 186 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 LRRC32Q14392 662 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 TAF13Q15543 124 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 XKR4Q5GH76 650 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.39□□□□□ -0.27
EPHB3-201ENST00000330394 APCDD1Q8J025 514 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 ZNF563Q8TA94 476 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 DNAJA4Q8WW22 397 aaPredicted RBP13.39□□□□□ -0.27
EPHB3-201ENST00000330394 CSF3RQ99062 836 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 EPYCQ99645 322 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 GALNT9Q9HCQ5 603 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 RABL2AQ9UBK7 228 aaPredicted RBP13.39□□□□□ -0.27
EPHB3-201ENST00000330394 CLEC2DQ9UHP7 191 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 TNFRSF10AO00220 468 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 SMAD6O43541 496 aaKnown RBP13.39□□□□□ -0.27
EPHB3-201ENST00000330394 SLC19A2O60779 497 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 STC2O76061 302 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 CXCL14O95715 111 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 SERPINA3P01011 423 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 LHCGRP22888 699 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 CCR8P51685 355 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 RING1Q06587 406 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 SLC25A24Q6NUK1 477 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 PLCZ1Q86YW0 608 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 OR8K5Q8NH50 307 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 SH3RF2Q8TEC5 729 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 HMGB4Q8WW32 186 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 SCLYQ96I15 445 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 FAM46AQ96IP4 442 aaKnown RBP13.39□□□□□ -0.27
EPHB3-201ENST00000330394 ZNF354BQ96LW1 612 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 ARHGAP39Q9C0H5 1083 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 ARPC5O15511 151 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 EPHX1P07099 455 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 MAT2AP31153 395 aaKnown RBP13.39□□□□□ -0.27
EPHB3-201ENST00000330394 PSMD8P48556 350 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 SLC11A1P49279 550 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 CTF1Q16619 201 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 GDPGP1Q6ZNW5 385 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 TEX26Q8N6G2 289 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 SPERTQ8NA61 448 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 SORBS1Q9BX66 1292 aaKnown RBP13.39□□□□□ -0.27
EPHB3-201ENST00000330394 B3GNT4Q9C0J1 378 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 TRPV4Q9HBA0 871 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 AKIP1Q9NQ31 210 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 NOP16Q9Y3C1 178 aaKnown RBP13.39□□□□□ -0.27
EPHB3-201ENST00000330394 WDR45Q9Y484 360 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 ADAMTSL3P82987 1691 aa13.39□□□□□ -0.27
EPHB3-201ENST00000330394 FAM183AA6NL82 134 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 TTC34A8MYJ7 566 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 AOC2O75106 756 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 RP2O75695 350 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 DBIP07108 87 aaKnown RBP13.38□□□□□ -0.27
EPHB3-201ENST00000330394 C1GALT1C1LP0DN25 315 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 RPS19P39019 145 aaKnown RBP13.38□□□□□ -0.27
EPHB3-201ENST00000330394 HOXC5Q00444 222 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 OTUD1Q5VV17 481 aaPredicted RBP13.38□□□□□ -0.27
EPHB3-201ENST00000330394 PLBD1Q6P4A8 553 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 OSTF1Q92882 214 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 LMLNQ96KR4 655 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 HMX1Q9NP08 348 aaPredicted RBP13.38□□□□□ -0.27
EPHB3-201ENST00000330394 POT1Q9NUX5 634 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 TMEM30AQ9NV96 361 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 PLEKHA6Q9Y2H5 1048 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 CDH10Q9Y6N8 788 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 MMP20O60882 483 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 HLA-EP13747 358 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 SPNP16150 400 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 ZNF3P17036 446 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 GNALP38405 381 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 GRIN2CQ14957 1233 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 SLC5A12Q1EHB4 618 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 C1QTNF12Q5T7M4 302 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 C22orf39Q6P5X5 142 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 ANKK1Q8NFD2 765 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 CASTOR1Q8WTX7 329 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 SLC7A6Q92536 515 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms