RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 L7N2F9 121 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 SLC7A4O43246 635 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 LANCL1O43813 399 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 RBBP9O75884 186 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 LGI1O95970 557 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 SULT1A3P0DMM9 295 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 SULT1A4P0DMN0 295 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 CD1DP15813 335 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 ITPKAP23677 461 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 PSMA1P25786 263 aaKnown RBP11.28□□□□□ -0.6
SHMT2-201ENST00000328923 SUOXP51687 545 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 NR0B1P51843 470 aaKnown RBP11.28□□□□□ -0.6
SHMT2-201ENST00000328923 RBBP4Q09028 425 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 HABP2Q14520 560 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-201ENST00000328923 RNF212Q495C1 297 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 ZNF789Q5FWF6 425 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 TMEM207Q6UWW9 146 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 GPR149Q86SP6 731 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 CILP2Q8IUL8 1156 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 FAM126BQ8IXS8 530 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 ARRDC1Q8N5I2 433 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 OTULINQ96BN8 352 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 PYURFQ96I23 114 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 NTMT1Q9BV86 223 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 ABHD16BQ9H3Z7 469 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 ZNF226Q9NYT6 803 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 STUB1Q9UNE7 303 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 NUP205Q92621 2012 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 E9PQ18 207 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 TCAPO15273 167 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 OR1I1O60431 355 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 SCELO95171 688 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 SCG5P05408 212 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 IL1RNP18510 177 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 FPR1P21462 350 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 ITGB7P26010 798 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 DNAJA1P31689 397 aaKnown RBP11.27□□□□□ -0.61
SHMT2-201ENST00000328923 VIPR1P32241 457 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 MEF2AQ02078 507 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-201ENST00000328923 GANABQ14697 944 aaKnown RBP11.27□□□□□ -0.61
SHMT2-201ENST00000328923 EIF4HQ15056 248 aaKnown RBP11.27□□□□□ -0.61
SHMT2-201ENST00000328923 ST3GAL2Q16842 350 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 C22orf42Q6IC83 251 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 PHACTR4Q8IZ21 702 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 LINC01465Q8N7H1 131 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 GPR150Q8NGU9 434 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 OR2M2Q96R28 347 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 DUSP16Q9BY84 665 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 CHIAQ9BZP6 476 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 MED11Q9P086 117 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 CPA4Q9UI42 421 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 WASH3PC4AMC7 463 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 DISC1C4P0D8 188 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 H3BRB1 525 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 I6L893 689 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-201ENST00000328923 PPEF2O14830 753 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 SSNA1O43805 119 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 SEMA7AO75326 666 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 CBSLP0DN79 551 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 FDXRP22570 491 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 VAMP1P23763 118 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 SDC2P34741 201 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 BTCP35070 178 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 CBSP35520 551 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 GGT2P36268 569 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 CD79BP40259 229 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 CDKN2DP55273 166 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 TLE2Q04725 743 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 NOGQ13253 232 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 ILKQ13418 452 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 SMCO1Q147U7 214 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 PPA1Q15181 289 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 ZBTB6Q15916 424 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 GUCA2BQ16661 112 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 PLEKHH3Q7Z736 793 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 NUDT13Q86X67 352 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 SERPINA12Q8IW75 414 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 KCNJ9Q92806 393 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 ZNF599Q96NL3 588 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 ZIC5Q96T25 663 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 TSNAXQ99598 290 aaKnown RBP11.27□□□□□ -0.61
SHMT2-201ENST00000328923 FSD1LQ9BXM9 530 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 AP5M1Q9H0R1 490 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 C11orf49Q9H6J7 331 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 MVB12BQ9H7P6 319 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 MPP6Q9NZW5 540 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 CFAP97Q9P2B7 532 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 PISDQ9UG56 409 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 DHRS7Q9Y394 339 aa11.27□□□□□ -0.61
SHMT2-201ENST00000328923 ARHGEF33A8MVX0 844 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 CD3EAPO15446 510 aaKnown RBP11.26□□□□□ -0.61
SHMT2-201ENST00000328923 ULK1O75385 1050 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 ZNF682O95780 498 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 PAK4O96013 591 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-201ENST00000328923 RB1P06400 928 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 MTHFD2P13995 350 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 ACLYP53396 1101 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 PWP1Q13610 501 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 MELKQ14680 651 aa11.26□□□□□ -0.61
SHMT2-201ENST00000328923 DCAF4L1Q3SXM0 396 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms