RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 TIMMDC1Q9NPL8 285 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 ACSS2Q9NR19 701 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 CNIH4Q9P003 139 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 DHCR7Q9UBM7 475 aaKnown RBP4.84□□□□□ -1.63
LRIT3-201ENST00000327908 L3MBTL1Q9Y468 752 aa4.84□□□□□ -1.63
LRIT3-201ENST00000327908 CDC14CA4D256 554 aa4.84□□□□□ -1.64
LRIT3-201ENST00000327908 LINC01387J3KSC0 135 aa4.84□□□□□ -1.64
LRIT3-201ENST00000327908 MRASO14807 208 aa4.84□□□□□ -1.64
LRIT3-201ENST00000327908 B4GALT2O60909 372 aa4.84□□□□□ -1.64
LRIT3-201ENST00000327908 ESRRAP11474 423 aaPredicted RBP4.84□□□□□ -1.64
LRIT3-201ENST00000327908 ITIH1P19827 911 aa4.84□□□□□ -1.64
LRIT3-201ENST00000327908 MSX1P28360 303 aa4.84□□□□□ -1.64
LRIT3-201ENST00000327908 EPHA3P29320 983 aa4.84□□□□□ -1.64
LRIT3-201ENST00000327908 SERPINB3P29508 390 aa4.84□□□□□ -1.64
LRIT3-201ENST00000327908 SNTA1Q13424 505 aa4.84□□□□□ -1.64
LRIT3-201ENST00000327908 PGS1Q32NB8 556 aa4.84□□□□□ -1.64
LRIT3-201ENST00000327908 SLC9B1Q4ZJI4 515 aa4.84□□□□□ -1.64
LRIT3-201ENST00000327908 SAMD4BQ5PRF9 694 aaKnown RBP4.84□□□□□ -1.64
LRIT3-201ENST00000327908 PATL1Q86TB9 770 aaKnown RBP4.84□□□□□ -1.64
LRIT3-201ENST00000327908 OR52N2Q8NGI0 321 aa4.84□□□□□ -1.64
LRIT3-201ENST00000327908 NEURL3Q96EH8 262 aa4.84□□□□□ -1.64
LRIT3-201ENST00000327908 AMDHD1Q96NU7 426 aa4.84□□□□□ -1.64
LRIT3-201ENST00000327908 RAB3IPQ96QF0 476 aaPredicted RBP4.84□□□□□ -1.64
LRIT3-201ENST00000327908 BTBD2Q9BX70 525 aa4.84□□□□□ -1.64
LRIT3-201ENST00000327908 MYLK2Q9H1R3 596 aa4.84□□□□□ -1.64
LRIT3-201ENST00000327908 CXorf21Q9HAI6 301 aa4.84□□□□□ -1.64
LRIT3-201ENST00000327908 KCNK13Q9HB14 408 aa4.84□□□□□ -1.64
LRIT3-201ENST00000327908 SLCO1B3Q9NPD5 702 aa4.84□□□□□ -1.64
LRIT3-201ENST00000327908 FARSBQ9NSD9 589 aaKnown RBP4.84□□□□□ -1.64
LRIT3-201ENST00000327908 FOXJ2Q9P0K8 574 aa4.84□□□□□ -1.64
LRIT3-201ENST00000327908 ATG4BQ9Y4P1 393 aa4.84□□□□□ -1.64
LRIT3-201ENST00000327908 COPG1Q9Y678 874 aaKnown RBP4.84□□□□□ -1.64
LRIT3-201ENST00000327908 OTOGLQ3ZCN5 2332 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 IGHV1-45A0A0A0MS14 117 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 C17orf105B2RV13 164 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 C5orf58C9J3I9 102 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 ERAL1O75616 437 aaKnown RBP4.83□□□□□ -1.64
LRIT3-201ENST00000327908 OR1D4P47884 311 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 FOLH1Q04609 750 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 ZNF155Q12901 538 aaPredicted RBP4.83□□□□□ -1.64
LRIT3-201ENST00000327908 NFYCQ13952 458 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 BORAQ6PGQ7 559 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 BNC2Q6ZN30 1099 aaPredicted RBP4.83□□□□□ -1.64
LRIT3-201ENST00000327908 CLNKQ7Z7G1 428 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 OR2L13Q8N349 312 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 TMEM178AQ8NBL3 297 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 OR2T11Q8NH01 316 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 TMEM125Q96AQ2 219 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 EXOSC8Q96B26 276 aaKnown RBP4.83□□□□□ -1.64
LRIT3-201ENST00000327908 ANKRD9Q96BM1 317 aaPredicted RBP4.83□□□□□ -1.64
LRIT3-201ENST00000327908 C5orf34Q96MH7 638 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 PPM1MQ96MI6 270 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 PANX1Q96RD7 426 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 ZNF607Q96SK3 696 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 NDEL1Q9GZM8 345 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 YY1AP1Q9H869 796 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 QPCTLQ9NXS2 382 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 P2RX2Q9UBL9 471 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.83□□□□□ -1.64
LRIT3-201ENST00000327908 SLC13A4Q9UKG4 626 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 KLF13Q9Y2Y9 288 aaPredicted RBP4.83□□□□□ -1.64
LRIT3-201ENST00000327908 IFT52Q9Y366 437 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 TTC28Q96AY4 2481 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 K7ENP7 123 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 NR5A2O00482 541 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 COX4I1P13073 169 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 LIFP15018 202 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 OTX2P32243 289 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 MFAP5Q13361 173 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 ZNF628Q5EBL2 1059 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 FBXO48Q5FWF7 155 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 GCNT6Q5T4J0 391 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 H3F3CQ6NXT2 135 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 INO80CQ6PI98 192 aaPredicted RBP4.83□□□□□ -1.64
LRIT3-201ENST00000327908 PAOXQ6QHF9 649 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 RTL4Q6ZR62 310 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 TRPM8Q7Z2W7 1104 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 YTHDF3Q7Z739 585 aaKnown RBP4.83□□□□□ -1.64
LRIT3-201ENST00000327908 DHDDSQ86SQ9 333 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 PDSS2Q86YH6 399 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 FAM20CQ8IXL6 584 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 ADAMTS15Q8TE58 950 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 HOXB13Q92826 284 aaPredicted RBP4.83□□□□□ -1.64
LRIT3-201ENST00000327908 ZNF681Q96N22 645 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 BTBD9Q96Q07 612 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 EBPLQ9BY08 206 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 APMAPQ9HDC9 416 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 PNO1Q9NRX1 252 aaKnown RBP4.83□□□□□ -1.64
LRIT3-201ENST00000327908 P4HTMQ9NXG6 502 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 B4GALT7Q9UBV7 327 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 ZNF639Q9UID6 485 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 ZNF232Q9UNY5 417 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 PCDHGA10Q9Y5H3 936 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 PCNTO95613 3336 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 CCT8L1PA6NM43 557 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 FAM220BPB1ANY3 271 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 TMEM233B4DJY2 109 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 ANKRD28O15084 1053 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 KLK10O43240 276 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 EFSO43281 561 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms