RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 RD3Q7Z3Z2 195 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 ZNF614Q8N883 585 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 SUSD6Q92537 303 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 TXNDC15Q96J42 360 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 TMEM38AQ9H6F2 299 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 HHATLQ9HCP6 504 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 P2RX2Q9UBL9 471 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 SEC14L4Q9UDX3 406 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 NUFIP1Q9UHK0 495 aaKnown RBP12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 CLEC4AQ9UMR7 237 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 MGAT4BQ9UQ53 548 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 KLK4Q9Y5K2 254 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 CLCA3PQ9Y6N3 262 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 NPC1O15118 1278 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 PRKYO43930 277 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 SRPRAP08240 638 aaKnown RBP12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 IL18Q14116 193 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 BAK1Q16611 211 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 SMARCD3Q6STE5 483 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 C12orf76Q8N812 135 aaPredicted RBP12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 KIAA1958Q8N8K9 716 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 PLA2G15Q8NCC3 412 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 OR5P2Q8WZ92 322 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 NELL2Q99435 816 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 HDHD5Q9BXW7 423 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 PAQR5Q9NXK6 330 aaPredicted RBP12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 ITGB1BP2Q9UKP3 347 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 OR1A2Q9Y585 309 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 IRAK3Q9Y616 596 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 PCM1Q15154 2024 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 SH3D21A4FU49 640 aa12.21□□□□□ -0.45
HMGCS1-201ENST00000325110 CTSAP10619 480 aa12.21□□□□□ -0.45
HMGCS1-201ENST00000325110 ADH5P11766 374 aa12.21□□□□□ -0.45
HMGCS1-201ENST00000325110 DDCP20711 480 aa12.21□□□□□ -0.45
HMGCS1-201ENST00000325110 RNASE12Q5GAN4 147 aaKnown RBP12.21□□□□□ -0.45
HMGCS1-201ENST00000325110 TECPR1Q7Z6L1 1165 aa12.21□□□□□ -0.45
HMGCS1-201ENST00000325110 AMER3Q8N944 861 aa12.21□□□□□ -0.45
HMGCS1-201ENST00000325110 GPR32P1Q8NGA4 272 aa12.21□□□□□ -0.45
HMGCS1-201ENST00000325110 OR8K5Q8NH50 307 aa12.21□□□□□ -0.45
HMGCS1-201ENST00000325110 TP53INP1Q96A56 240 aa12.21□□□□□ -0.45
HMGCS1-201ENST00000325110 FCRL1Q96LA6 429 aa12.21□□□□□ -0.45
HMGCS1-201ENST00000325110 DEC1Q9P2X7 70 aa12.21□□□□□ -0.45
HMGCS1-201ENST00000325110 ENTPD4Q9Y227 616 aa12.21□□□□□ -0.45
HMGCS1-201ENST00000325110 CMAHPQ9Y471 501 aa12.21□□□□□ -0.45
HMGCS1-201ENST00000325110 NTN1O95631 604 aa12.21□□□□□ -0.45
HMGCS1-201ENST00000325110 FGBP02675 491 aa12.21□□□□□ -0.45
HMGCS1-201ENST00000325110 PSKH1P11801 424 aa12.21□□□□□ -0.45
HMGCS1-201ENST00000325110 IL7P13232 177 aa12.21□□□□□ -0.45
HMGCS1-201ENST00000325110 CXCR2P25025 360 aa12.21□□□□□ -0.45
HMGCS1-201ENST00000325110 SLC6A11P48066 632 aa12.21□□□□□ -0.45
HMGCS1-201ENST00000325110 CCR8P51685 355 aa12.21□□□□□ -0.45
HMGCS1-201ENST00000325110 HTRA3P83110 453 aa12.21□□□□□ -0.45
HMGCS1-201ENST00000325110 ARHGEF6Q15052 776 aa12.21□□□□□ -0.45
HMGCS1-201ENST00000325110 FAM46CQ5VWP2 391 aa12.21□□□□□ -0.45
HMGCS1-201ENST00000325110 GALNT12Q8IXK2 581 aa12.21□□□□□ -0.45
HMGCS1-201ENST00000325110 TRMT61AQ96FX7 289 aaKnown RBP12.21□□□□□ -0.45
HMGCS1-201ENST00000325110 NECTIN4Q96NY8 510 aa12.21□□□□□ -0.45
HMGCS1-201ENST00000325110 QRFPRQ96P65 431 aa12.21□□□□□ -0.45
HMGCS1-201ENST00000325110 NEUROD4Q9HD90 331 aa12.21□□□□□ -0.45
HMGCS1-201ENST00000325110 UGT2A1Q9Y4X1 527 aa12.21□□□□□ -0.45
HMGCS1-201ENST00000325110 PLXNA4Q9HCM2 1894 aa12.21□□□□□ -0.45
HMGCS1-201ENST00000325110 NDUFS4O43181 175 aa12.21□□□□□ -0.46
HMGCS1-201ENST00000325110 COQ9O75208 318 aa12.21□□□□□ -0.46
HMGCS1-201ENST00000325110 EPCAMP16422 314 aa12.21□□□□□ -0.46
HMGCS1-201ENST00000325110 CELP19835 753 aa12.21□□□□□ -0.46
HMGCS1-201ENST00000325110 SMIM11AP58511 58 aa12.21□□□□□ -0.46
HMGCS1-201ENST00000325110 DCDC1P59894 354 aa12.21□□□□□ -0.46
HMGCS1-201ENST00000325110 RACK1P63244 317 aaKnown RBP12.21□□□□□ -0.46
HMGCS1-201ENST00000325110 SLAMF1Q13291 335 aa12.21□□□□□ -0.46
HMGCS1-201ENST00000325110 GPR19Q15760 415 aa12.21□□□□□ -0.46
HMGCS1-201ENST00000325110 DDI2Q5TDH0 399 aa12.21□□□□□ -0.46
HMGCS1-201ENST00000325110 PLET1Q6UQ28 207 aa12.21□□□□□ -0.46
HMGCS1-201ENST00000325110 C16orf62Q7Z3J2 963 aa12.21□□□□□ -0.46
HMGCS1-201ENST00000325110 FAM129CQ86XR2 697 aa12.21□□□□□ -0.46
HMGCS1-201ENST00000325110 DCUN1D3Q8IWE4 304 aa12.21□□□□□ -0.46
HMGCS1-201ENST00000325110 NXPE3Q969Y0 559 aa12.21□□□□□ -0.46
HMGCS1-201ENST00000325110 ARSGQ96EG1 525 aa12.21□□□□□ -0.46
HMGCS1-201ENST00000325110 HDHD2Q9H0R4 259 aa12.21□□□□□ -0.46
HMGCS1-201ENST00000325110 RHBGQ9H310 441 aa12.21□□□□□ -0.46
HMGCS1-201ENST00000325110 RMI1Q9H9A7 625 aa12.21□□□□□ -0.46
HMGCS1-201ENST00000325110 CNOT2Q9NZN8 540 aaKnown RBP12.21□□□□□ -0.46
HMGCS1-201ENST00000325110 FTSJ1Q9UET6 329 aa12.21□□□□□ -0.46
HMGCS1-201ENST00000325110 STUB1Q9UNE7 303 aa12.21□□□□□ -0.46
HMGCS1-201ENST00000325110 GSTK1Q9Y2Q3 226 aa12.21□□□□□ -0.46
HMGCS1-201ENST00000325110 FAM170BA6NMN3 283 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 FOXE1O00358 373 aaPredicted RBP12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 FAAHO00519 579 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 SLC30A4O14863 429 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 TMPRSS11DO60235 418 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 S100A1P23297 94 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 IRS1P35568 1242 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 ZNF791Q3KP31 576 aaPredicted RBP12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 ZNF362Q5T0B9 420 aaPredicted RBP12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 ATAD3CQ5T2N8 411 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 NDUFAF5Q5TEU4 345 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 ACSM5Q6NUN0 579 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 TMEM107Q6UX40 140 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 SLC39A5Q6ZMH5 540 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 C12orf40Q86WS4 652 aa12.2□□□□□ -0.46
HMGCS1-201ENST00000325110 CRIPAKQ8N1N5 446 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms