RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 AIFM1O95831 613 aa12.03□□□□□ -0.48
DDX39A-202ENST00000324340 NBL1P41271 181 aa12.03□□□□□ -0.48
DDX39A-202ENST00000324340 ARL4DP49703 201 aa12.03□□□□□ -0.48
DDX39A-202ENST00000324340 SEPHS1P49903 392 aa12.03□□□□□ -0.48
DDX39A-202ENST00000324340 LIM2P55344 173 aa12.03□□□□□ -0.48
DDX39A-202ENST00000324340 PCBP4P57723 403 aaKnown RBP12.03□□□□□ -0.48
DDX39A-202ENST00000324340 ATP1A4Q13733 1029 aa12.03□□□□□ -0.48
DDX39A-202ENST00000324340 RUNX2Q13950 521 aa12.03□□□□□ -0.48
DDX39A-202ENST00000324340 CAPRIN1Q14444 709 aaKnown RBP12.03□□□□□ -0.48
DDX39A-202ENST00000324340 KCNAB1Q14722 419 aa12.03□□□□□ -0.48
DDX39A-202ENST00000324340 GRM7Q14831 915 aa12.03□□□□□ -0.48
DDX39A-202ENST00000324340 RAB39AQ14964 217 aa12.03□□□□□ -0.48
DDX39A-202ENST00000324340 KCNJ8Q15842 424 aa12.03□□□□□ -0.48
DDX39A-202ENST00000324340 SLC36A3Q495N2 470 aa12.03□□□□□ -0.48
DDX39A-202ENST00000324340 SAMD4BQ5PRF9 694 aaKnown RBP12.03□□□□□ -0.48
DDX39A-202ENST00000324340 SNAP47Q5SQN1 464 aa12.03□□□□□ -0.48
DDX39A-202ENST00000324340 C6orf10Q5SRN2 563 aa12.03□□□□□ -0.48
DDX39A-202ENST00000324340 PRSS41Q7RTY9 318 aa12.03□□□□□ -0.48
DDX39A-202ENST00000324340 MSRB3Q8IXL7 192 aa12.03□□□□□ -0.48
DDX39A-202ENST00000324340 RHBDD1Q8TEB9 315 aa12.03□□□□□ -0.48
DDX39A-202ENST00000324340 TMEM125Q96AQ2 219 aa12.03□□□□□ -0.48
DDX39A-202ENST00000324340 ALPK1Q96QP1 1244 aa12.03□□□□□ -0.48
DDX39A-202ENST00000324340 INPP5KQ9BT40 448 aa12.03□□□□□ -0.48
DDX39A-202ENST00000324340 EDEM2Q9BV94 578 aa12.03□□□□□ -0.48
DDX39A-202ENST00000324340 NANOGQ9H9S0 305 aa12.03□□□□□ -0.48
DDX39A-202ENST00000324340 IL1RL2Q9HB29 575 aa12.03□□□□□ -0.48
DDX39A-202ENST00000324340 CPNE5Q9HCH3 593 aa12.03□□□□□ -0.48
DDX39A-202ENST00000324340 SLC25A37Q9NYZ2 338 aa12.03□□□□□ -0.48
DDX39A-202ENST00000324340 CD300AQ9UGN4 299 aa12.03□□□□□ -0.48
DDX39A-202ENST00000324340 CES1P1Q9UKY3 287 aa12.03□□□□□ -0.48
DDX39A-202ENST00000324340 NAALAD2Q9Y3Q0 740 aa12.03□□□□□ -0.48
DDX39A-202ENST00000324340 COL27A1Q8IZC6 1860 aaPredicted RBP12.02□□□□□ -0.48
DDX39A-202ENST00000324340 RP1P56715 2156 aa12.02□□□□□ -0.48
DDX39A-202ENST00000324340 MYOCOSA0A1B0GUC4 107 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 A0A1W2PPW3 197 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 ISPDA4D126 451 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 SAC3D1A6NKF1 404 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 A8MU76 341 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 H0YAE9 185 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 NME4O00746 187 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 RFXANKO14593 260 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 FOXS1O43638 330 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 IDH3BO43837 385 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 MED26O95402 600 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 NSA2O95478 260 aaKnown RBP12.02□□□□□ -0.49
DDX39A-202ENST00000324340 FOLR1P15328 257 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 IL1RNP18510 177 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 CDKN2CP42773 168 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 SLC7A2P52569 658 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 SKP1P63208 163 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 TNFRSF17Q02223 184 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 SPEM2Q0P670 501 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 MERTKQ12866 999 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 MLC1Q15049 377 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 CEBPEQ15744 281 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 RUNDC3AQ59EK9 446 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 C18orf63Q68DL7 685 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 SLC48A1Q6P1K1 146 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 ZNF773Q6PK81 442 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 FKBP9P1Q75LS8 142 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 IGFN1Q86VF2 1251 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 ANKRD46Q86W74 232 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 SLITRK4Q8IW52 837 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 CLECL1Q8IZS7 167 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 SLC15A4Q8N697 577 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 DNAJB14Q8TBM8 379 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 RASSF5Q8WWW0 418 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 TANKQ92844 425 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 CIDECQ96AQ7 238 aaPredicted RBP12.02□□□□□ -0.49
DDX39A-202ENST00000324340 ZNF501Q96CX3 271 aaPredicted RBP12.02□□□□□ -0.49
DDX39A-202ENST00000324340 FAM122AQ96E09 287 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 PANX1Q96RD7 426 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 GFM1Q96RP9 751 aaKnown RBP12.02□□□□□ -0.49
DDX39A-202ENST00000324340 DCUN1D5Q9BTE7 237 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 RAD21L1Q9H4I0 556 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 SP140LQ9H930 580 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 TMEM9BQ9NQ34 198 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 SLC6A13Q9NSD5 602 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 RXFP3Q9NSD7 469 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 ACSS1Q9NUB1 689 aaPredicted RBP12.02□□□□□ -0.49
DDX39A-202ENST00000324340 CMTM6Q9NX76 183 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 ADA2Q9NZK5 511 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 FTSJ1Q9UET6 329 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 DAPK2Q9UIK4 370 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 FBXW2Q9UKT8 454 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 CDC14AQ9UNH5 594 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 PCDHB14Q9Y5E9 798 aa12.02□□□□□ -0.49
DDX39A-202ENST00000324340 DNAH14Q0VDD8 3507 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 ASXL3Q9C0F0 2248 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 PRORSD1PA6NEY8 169 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 TMEM150CB9EJG8 249 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 D6RAR5 112 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 DNAJB6O75190 326 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 OR2B3O76000 313 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 TFPTP0C1Z6 253 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 NR2F6P10588 404 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 HSD17B1P14061 328 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 TGM1P22735 817 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 CPN2P22792 545 aa12.01□□□□□ -0.49
DDX39A-202ENST00000324340 BUD31P41223 144 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms