RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 METTL15A6NJ78 407 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 AXIN1O15169 862 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 PROM1O43490 865 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 SULT1C4O75897 302 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 EMP3P54852 163 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 EIF2B5Q13144 721 aaKnown RBP14.03□□□□□ -0.16
TCOF1-201ENST00000323668 PDGFRLQ15198 375 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 GET4Q7L5D6 327 aaPredicted RBP14.03□□□□□ -0.16
TCOF1-201ENST00000323668 RFT1Q96AA3 541 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 MTG2Q9H4K7 406 aa14.03□□□□□ -0.16
TCOF1-201ENST00000323668 NUFIP1Q9UHK0 495 aaKnown RBP14.03□□□□□ -0.16
TCOF1-201ENST00000323668 M0R3H8 397 aa14.02□□□□□ -0.16
TCOF1-201ENST00000323668 MID1O15344 667 aa14.02□□□□□ -0.16
TCOF1-201ENST00000323668 CST5P28325 142 aaPredicted RBP14.02□□□□□ -0.16
TCOF1-201ENST00000323668 GUCA1AP43080 201 aaPredicted RBP14.02□□□□□ -0.16
TCOF1-201ENST00000323668 PRMT2P55345 433 aa14.02□□□□□ -0.16
TCOF1-201ENST00000323668 SLAMF1Q13291 335 aa14.02□□□□□ -0.16
TCOF1-201ENST00000323668 AQP6Q13520 282 aa14.02□□□□□ -0.16
TCOF1-201ENST00000323668 GRASPQ7Z6J2 395 aaPredicted RBP14.02□□□□□ -0.16
TCOF1-201ENST00000323668 LACC1Q8IV20 430 aa14.02□□□□□ -0.16
TCOF1-201ENST00000323668 LYSMD2Q8IV50 215 aa14.02□□□□□ -0.16
TCOF1-201ENST00000323668 GID4Q8IVV7 300 aa14.02□□□□□ -0.16
TCOF1-201ENST00000323668 PROKR2Q8NFJ6 384 aa14.02□□□□□ -0.16
TCOF1-201ENST00000323668 OR52E4Q8NGH9 312 aa14.02□□□□□ -0.16
TCOF1-201ENST00000323668 ASB15Q8WXK1 588 aa14.02□□□□□ -0.16
TCOF1-201ENST00000323668 SLC22A12Q96S37 553 aa14.02□□□□□ -0.16
TCOF1-201ENST00000323668 TTYH1Q9H313 450 aaPredicted RBP14.02□□□□□ -0.16
TCOF1-201ENST00000323668 MARCH5Q9NX47 278 aa14.02□□□□□ -0.16
TCOF1-201ENST00000323668 GPR52Q9Y2T5 361 aa14.02□□□□□ -0.16
TCOF1-201ENST00000323668 ARHGAP33O14559 1287 aa14.02□□□□□ -0.16
TCOF1-201ENST00000323668 ARAFP10398 606 aa14.02□□□□□ -0.16
TCOF1-201ENST00000323668 PTNP21246 168 aa14.02□□□□□ -0.16
TCOF1-201ENST00000323668 TMEM179BQ7Z7N9 219 aa14.02□□□□□ -0.16
TCOF1-201ENST00000323668 ACBD7Q8N6N7 88 aa14.02□□□□□ -0.16
TCOF1-201ENST00000323668 C1orf216Q8TAB5 229 aa14.02□□□□□ -0.16
TCOF1-201ENST00000323668 ABCG5Q9H222 651 aa14.02□□□□□ -0.16
TCOF1-201ENST00000323668 TCF7L1Q9HCS4 588 aa14.02□□□□□ -0.16
TCOF1-201ENST00000323668 FBXO8Q9NRD0 319 aa14.02□□□□□ -0.16
TCOF1-201ENST00000323668 NDUFAF4Q9P032 175 aa14.02□□□□□ -0.16
TCOF1-201ENST00000323668 POU2F3Q9UKI9 436 aa14.02□□□□□ -0.16
TCOF1-201ENST00000323668 DOCK5Q9H7D0 1870 aa14.02□□□□□ -0.17
TCOF1-201ENST00000323668 PDCD5O14737 125 aa14.02□□□□□ -0.17
TCOF1-201ENST00000323668 TSPAN9O75954 239 aa14.02□□□□□ -0.17
TCOF1-201ENST00000323668 RASGRP1O95267 797 aa14.02□□□□□ -0.17
TCOF1-201ENST00000323668 IFNA7P01567 189 aa14.02□□□□□ -0.17
TCOF1-201ENST00000323668 CAPNS1P04632 268 aa14.02□□□□□ -0.17
TCOF1-201ENST00000323668 DDCP20711 480 aa14.02□□□□□ -0.17
TCOF1-201ENST00000323668 FSHRP23945 695 aa14.02□□□□□ -0.17
TCOF1-201ENST00000323668 PDHA2P29803 388 aa14.02□□□□□ -0.17
TCOF1-201ENST00000323668 GCGRP47871 477 aa14.02□□□□□ -0.17
TCOF1-201ENST00000323668 TAS2R43P59537 309 aa14.02□□□□□ -0.17
TCOF1-201ENST00000323668 SLC30A6Q6NXT4 461 aa14.02□□□□□ -0.17
TCOF1-201ENST00000323668 ERN2Q76MJ5 926 aaKnown RBP14.02□□□□□ -0.17
TCOF1-201ENST00000323668 VRK3Q8IV63 474 aa14.02□□□□□ -0.17
TCOF1-201ENST00000323668 TNFAIP8L1Q8WVP5 186 aa14.02□□□□□ -0.17
TCOF1-201ENST00000323668 AKAP1Q92667 903 aaKnown RBP eCLIP14.02□□□□□ -0.17
TCOF1-201ENST00000323668 RIPOR3Q96MK2 946 aa14.02□□□□□ -0.17
TCOF1-201ENST00000323668 PDCD10Q9BUL8 212 aa14.02□□□□□ -0.17
TCOF1-201ENST00000323668 CHIAQ9BZP6 476 aa14.02□□□□□ -0.17
TCOF1-201ENST00000323668 MMP28Q9H239 520 aa14.02□□□□□ -0.17
TCOF1-201ENST00000323668 RNF121Q9H920 327 aa14.02□□□□□ -0.17
TCOF1-201ENST00000323668 TRAV6A0A075B6T7 132 aa14.02□□□□□ -0.17
TCOF1-201ENST00000323668 TPD52L2O43399 206 aaKnown RBP14.02□□□□□ -0.17
TCOF1-201ENST00000323668 GNRH1P01148 92 aa14.02□□□□□ -0.17
TCOF1-201ENST00000323668 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.02□□□□□ -0.17
TCOF1-201ENST00000323668 KLBQ86Z14 1044 aa14.02□□□□□ -0.17
TCOF1-201ENST00000323668 NUP43Q8NFH3 380 aa14.02□□□□□ -0.17
TCOF1-201ENST00000323668 POF1BQ8WVV4 589 aa14.02□□□□□ -0.17
TCOF1-201ENST00000323668 ZNF566Q969W8 418 aa14.02□□□□□ -0.17
TCOF1-201ENST00000323668 PKMYT1Q99640 499 aa14.02□□□□□ -0.17
TCOF1-201ENST00000323668 CARS2Q9HA77 564 aaKnown RBP14.02□□□□□ -0.17
TCOF1-201ENST00000323668 SLC35C2Q9NQQ7 365 aa14.02□□□□□ -0.17
TCOF1-201ENST00000323668 POLR1DQ9Y2S0 133 aa14.02□□□□□ -0.17
TCOF1-201ENST00000323668 A0A1W2PQ09 198 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 MEIOCA2RUB1 952 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 GNB5O14775 395 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 EMC8O43402 210 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 RHOP08100 348 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 C1SP09871 688 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 ZDHHC11BP0C7U3 371 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 ACADLP28330 430 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 WDR5P61964 334 aaKnown RBP14.01□□□□□ -0.17
TCOF1-201ENST00000323668 FAM214AQ32MH5 1076 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 GRHL3Q8TE85 626 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 MAFFQ9ULX9 164 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 CHURC1-FNTBB4DL54 471 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 GFRA2O00451 464 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 TGM5O43548 720 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 SLC25A12O75746 678 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 C6P13671 934 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 ZNF8P17098 575 aaPredicted RBP14.01□□□□□ -0.17
TCOF1-201ENST00000323668 HLA-FP30511 346 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 EIF2DP41214 584 aaKnown RBP14.01□□□□□ -0.17
TCOF1-201ENST00000323668 LEXMQ3ZCV2 418 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 NRARPQ7Z6K4 114 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.01□□□□□ -0.179e-8■□□□□ 8.4
TCOF1-201ENST00000323668 PIGKQ92643 395 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 DOK1Q99704 481 aa14.01□□□□□ -0.17
TCOF1-201ENST00000323668 MKKSQ9NPJ1 570 aaPredicted RBP14.01□□□□□ -0.17
TCOF1-201ENST00000323668 SPEF1Q9Y4P9 236 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms