RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 C6orf203Q9P0P8 240 aaPredicted RBP12.13□□□□□ -0.47
SYCN-201ENST00000318438 ZNF223Q9UK11 482 aaPredicted RBP12.13□□□□□ -0.47
SYCN-201ENST00000318438 ZNF490Q9ULM2 529 aaPredicted RBP12.13□□□□□ -0.47
SYCN-201ENST00000318438 IGKV3D-11A0A0A0MRZ8 115 aa12.12□□□□□ -0.47
SYCN-201ENST00000318438 TCRBV16S1A1N1A0A5B0 115 aa12.12□□□□□ -0.47
SYCN-201ENST00000318438 RIPK2O43353 540 aa12.12□□□□□ -0.47
SYCN-201ENST00000318438 ERI3O43414 337 aaKnown RBP12.12□□□□□ -0.47
SYCN-201ENST00000318438 KCNAB3O43448 404 aa12.12□□□□□ -0.47
SYCN-201ENST00000318438 HCN1O60741 890 aa12.12□□□□□ -0.47
SYCN-201ENST00000318438 OR2J2O76002 312 aa12.12□□□□□ -0.47
SYCN-201ENST00000318438 TBX6O95947 436 aaPredicted RBP12.12□□□□□ -0.47
SYCN-201ENST00000318438 COL6A2P12110 1019 aa12.12□□□□□ -0.47
SYCN-201ENST00000318438 RNH1P13489 461 aaKnown RBP12.12□□□□□ -0.47
SYCN-201ENST00000318438 EPB42P16452 691 aa12.12□□□□□ -0.47
SYCN-201ENST00000318438 CNR1P21554 472 aa12.12□□□□□ -0.47
SYCN-201ENST00000318438 SERPINB1P30740 379 aa12.12□□□□□ -0.47
SYCN-201ENST00000318438 CLCN2P51788 898 aa12.12□□□□□ -0.47
SYCN-201ENST00000318438 FOXO1Q12778 655 aa12.12□□□□□ -0.47
SYCN-201ENST00000318438 PFKFB4Q16877 469 aa12.12□□□□□ -0.47
SYCN-201ENST00000318438 TSNAXIP1Q2TAA8 658 aa12.12□□□□□ -0.47
SYCN-201ENST00000318438 ADNP2Q6IQ32 1131 aa12.12□□□□□ -0.47
SYCN-201ENST00000318438 METTL2BQ6P1Q9 378 aaKnown RBP12.12□□□□□ -0.47
SYCN-201ENST00000318438 TRIM40Q6P9F5 258 aa12.12□□□□□ -0.47
SYCN-201ENST00000318438 QSOX2Q6ZRP7 698 aa12.12□□□□□ -0.47
SYCN-201ENST00000318438 PLD6Q8N2A8 252 aaKnown RBP12.12□□□□□ -0.47
SYCN-201ENST00000318438 EIF1ADQ8N9N8 165 aaKnown RBP12.12□□□□□ -0.47
SYCN-201ENST00000318438 UHMK1Q8TAS1 419 aaKnown RBP12.12□□□□□ -0.47
SYCN-201ENST00000318438 ASB15Q8WXK1 588 aa12.12□□□□□ -0.47
SYCN-201ENST00000318438 FAR2Q96K12 515 aa12.12□□□□□ -0.47
SYCN-201ENST00000318438 C19orf24Q9BVV8 132 aa12.12□□□□□ -0.47
SYCN-201ENST00000318438 NPLQ9BXD5 320 aaPredicted RBP12.12□□□□□ -0.47
SYCN-201ENST00000318438 TXLNGYQ9BZA5 131 aa12.12□□□□□ -0.47
SYCN-201ENST00000318438 SEMA4BQ9NPR2 832 aaPredicted RBP12.12□□□□□ -0.47
SYCN-201ENST00000318438 YARS2Q9Y2Z4 477 aaKnown RBP12.12□□□□□ -0.47
SYCN-201ENST00000318438 TNPO3Q9Y5L0 923 aaKnown RBP12.12□□□□□ -0.47
SYCN-201ENST00000318438 ARHGAP21Q5T5U3 1957 aa12.12□□□□□ -0.47
SYCN-201ENST00000318438 KIAA1549Q9HCM3 1950 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 TRIM49D1C9J1S8 452 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 RNF223E7ERA6 249 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 PSMD12O00232 456 aaPredicted RBP12.11□□□□□ -0.47
SYCN-201ENST00000318438 CASKO14936 926 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 SIAH2O43255 324 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 MYO1DO94832 1006 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 EPPINO95925 133 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 IL2RAP01589 272 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 SNRPAP09012 282 aaKnown RBP12.11□□□□□ -0.47
SYCN-201ENST00000318438 RBP1P09455 135 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 FPR1P21462 350 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 SOX3P41225 446 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 PIK3CGP48736 1102 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 BTN3A2P78410 334 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 TGM3Q08188 693 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 CHRFAM7AQ494W8 412 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 LGSNQ5TDP6 509 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 MED27Q6P2C8 311 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 FAM47EQ6ZV65 393 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 LAS2Q8IYD9 372 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 CNPY4Q8N129 248 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 CA13Q8N1Q1 262 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 TEX9Q8N6V9 391 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 B3GNT7Q8NFL0 401 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 MTBPQ96DY7 904 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 SLC6A15Q9H2J7 730 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 NECTIN3Q9NQS3 549 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 PRDM9Q9NQV7 894 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 YAE1D1Q9NRH1 226 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 TUBA8Q9NY65 449 aaPredicted RBP12.11□□□□□ -0.47
SYCN-201ENST00000318438 CPSF2Q9P2I0 782 aaKnown RBP12.11□□□□□ -0.47
SYCN-201ENST00000318438 XPR1Q9UBH6 696 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 FETUBQ9UGM5 382 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 TMCO1Q9UM00 188 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 ANGPTL3Q9Y5C1 460 aa12.11□□□□□ -0.47
SYCN-201ENST00000318438 A0A0G2JN53 185 aa12.1□□□□□ -0.47
SYCN-201ENST00000318438 B3GALT2O43825 422 aa12.1□□□□□ -0.47
SYCN-201ENST00000318438 UGDHO60701 494 aa12.1□□□□□ -0.47
SYCN-201ENST00000318438 SIX3O95343 332 aaPredicted RBP12.1□□□□□ -0.47
SYCN-201ENST00000318438 TP53P04637 393 aaPredicted RBP12.1□□□□□ -0.47
SYCN-201ENST00000318438 FAM153BP0C7A2 387 aa12.1□□□□□ -0.47
SYCN-201ENST00000318438 GCAP28676 217 aa12.1□□□□□ -0.47
SYCN-201ENST00000318438 TIMP3P35625 211 aa12.1□□□□□ -0.47
SYCN-201ENST00000318438 PLA2G16P53816 162 aa12.1□□□□□ -0.47
SYCN-201ENST00000318438 HYAL4Q2M3T9 481 aa12.1□□□□□ -0.47
SYCN-201ENST00000318438 FAM153CQ494X1 144 aa12.1□□□□□ -0.47
SYCN-201ENST00000318438 LIPJQ5W064 366 aa12.1□□□□□ -0.47
SYCN-201ENST00000318438 GRHL2Q6ISB3 625 aa12.1□□□□□ -0.47
SYCN-201ENST00000318438 ABHD17CQ6PCB6 329 aa12.1□□□□□ -0.47
SYCN-201ENST00000318438 ADGRD1Q6QNK2 874 aa12.1□□□□□ -0.47
SYCN-201ENST00000318438 LACC1Q8IV20 430 aa12.1□□□□□ -0.47
SYCN-201ENST00000318438 GPALPP1Q8IXQ4 340 aa12.1□□□□□ -0.47
SYCN-201ENST00000318438 SRFBP1Q8NEF9 429 aaKnown RBP12.1□□□□□ -0.47
SYCN-201ENST00000318438 OR7G3Q8NG95 312 aa12.1□□□□□ -0.47
SYCN-201ENST00000318438 ZNF473Q8WTR7 871 aaKnown RBP12.1□□□□□ -0.47
SYCN-201ENST00000318438 QRFPRQ96P65 431 aa12.1□□□□□ -0.47
SYCN-201ENST00000318438 KCNC2Q96PR1 638 aa12.1□□□□□ -0.47
SYCN-201ENST00000318438 SERINC2Q96SA4 455 aa12.1□□□□□ -0.47
SYCN-201ENST00000318438 RBM24Q9BX46 236 aaKnown RBP12.1□□□□□ -0.47
SYCN-201ENST00000318438 MS4A8Q9BY19 250 aa12.1□□□□□ -0.47
SYCN-201ENST00000318438 COPS7BQ9H9Q2 264 aaPredicted RBP12.1□□□□□ -0.47
SYCN-201ENST00000318438 GALNT8Q9NY28 637 aa12.1□□□□□ -0.47
SYCN-201ENST00000318438 JKAMPQ9P055 326 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms