RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 CERCAMQ5T4B2 595 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 LIPNQ5VXI9 398 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 CD276Q5ZPR3 534 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 HIST2H2AA3Q6FI13 130 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 NADSYN1Q6IA69 706 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 OR5M10Q6IEU7 315 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 FAM198BQ6UWH4 519 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 TRIM46Q7Z4K8 759 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 GALNT5Q7Z7M9 940 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 GPR149Q86SP6 731 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 COMTD1Q86VU5 262 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 DENND6AQ8IWF6 608 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 FTMTQ8N4E7 242 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 ZNF461Q8TAF7 563 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 SCARB1Q8WTV0 552 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 HIST1H2AHQ96KK5 128 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 HIST1H2AJQ99878 128 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 KATNB1Q9BVA0 655 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 MRPL37Q9BZE1 423 aaKnown RBP6.33□□□□□ -1.4
ZNF540-201ENST00000316433 PDGFCQ9NRA1 345 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 WWOXQ9NZC7 414 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 ING1Q9UK53 422 aaPredicted RBP6.33□□□□□ -1.4
ZNF540-201ENST00000316433 SLC39A10Q9ULF5 831 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 GABRQQ9UN88 632 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 DUSP12Q9UNI6 340 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 PKP3Q9Y446 797 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 DNAJC15Q9Y5T4 150 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 PLXNB3Q9ULL4 1909 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 SDC3O75056 442 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 RPP40O75818 363 aaKnown RBP6.33□□□□□ -1.4
ZNF540-201ENST00000316433 RECQL4O94761 1208 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 IL33O95760 270 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 IFNGP01579 166 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 ADRB3P13945 408 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 DCTP40126 519 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 OR1G1P47890 313 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.33□□□□□ -1.4
ZNF540-201ENST00000316433 ZNF155Q12901 538 aaPredicted RBP6.33□□□□□ -1.4
ZNF540-201ENST00000316433 ILF3Q12906 894 aaKnown RBP eCLIP6.33□□□□□ -1.4
ZNF540-201ENST00000316433 PPP1R8Q12972 351 aaKnown RBP6.33□□□□□ -1.4
ZNF540-201ENST00000316433 SERINC3Q13530 473 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 SF3A2Q15428 464 aaKnown RBP6.33□□□□□ -1.4
ZNF540-201ENST00000316433 EML3Q32P44 896 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 ADGRF1Q5T601 910 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 LIPJQ5W064 366 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 ETV3LQ6ZN32 361 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 GCNT7Q6ZNI0 430 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 LDLRAD3Q86YD5 345 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 CBLN2Q8IUK8 224 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 SLC41A1Q8IVJ1 513 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 PDZD9Q8IXQ8 264 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 ADGRF3Q8IZF5 1079 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 PYROXD2Q8N2H3 581 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 MEIOBQ8N635 442 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 TRPV1Q8NER1 839 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 ACVR1CQ8NER5 493 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 OR1S1Q8NH92 325 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 OR10J5Q8NHC4 309 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 MOSPD2Q8NHP6 518 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 ARRDC2Q8TBH0 407 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 CLEC4CQ8WTT0 213 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 C2orf15Q8WU43 125 aaKnown RBP6.33□□□□□ -1.4
ZNF540-201ENST00000316433 ZNF419Q96HQ0 510 aaPredicted RBP6.33□□□□□ -1.4
ZNF540-201ENST00000316433 GABARAPL3Q9BY60 117 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 AKTIPQ9H8T0 292 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 CDHR5Q9HBB8 845 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 GKN1Q9NS71 199 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 C19orf12Q9NSK7 152 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 WBP1LQ9NX94 342 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 SCP2D1Q9UJQ7 156 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 STUB1Q9UNE7 303 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 CHTOPQ9Y3Y2 248 aaKnown RBP6.33□□□□□ -1.4
ZNF540-201ENST00000316433 PLXNA2O75051 1894 aa6.33□□□□□ -1.4
ZNF540-201ENST00000316433 ANAPC1Q9H1A4 1944 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 UBA6A0AVT1 1052 aaPredicted RBP6.32□□□□□ -1.4
ZNF540-201ENST00000316433 C7orf66A4D0T2 115 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 RFPL4AA6NLU0 287 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 ZNF879B4DU55 563 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 RFPL4AL1F8VTS6 287 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 GTPBP1O00178 669 aaKnown RBP6.32□□□□□ -1.4
ZNF540-201ENST00000316433 LCMT2O60294 686 aaKnown RBP6.32□□□□□ -1.4
ZNF540-201ENST00000316433 APBA3O96018 575 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 CXCL3P19876 107 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 POU3F2P20265 443 aaPredicted RBP6.32□□□□□ -1.4
ZNF540-201ENST00000316433 YWHAQP27348 245 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 CRABP1P29762 137 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 STC1P52823 247 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 OR4D2P58180 307 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 STARD6P59095 220 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 NFYCQ13952 458 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 BOP1Q14137 746 aaKnown RBP6.32□□□□□ -1.4
ZNF540-201ENST00000316433 HABP2Q14520 560 aaPredicted RBP6.32□□□□□ -1.4
ZNF540-201ENST00000316433 CDO1Q16878 200 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 MINDY4Q4G0A6 757 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 TMEM31Q5JXX7 168 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 BCL2L15Q5TBC7 163 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 DHRS7BQ6IAN0 325 aaPredicted RBP6.32□□□□□ -1.4
ZNF540-201ENST00000316433 CAMKMTQ7Z624 323 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 TMEM179BQ7Z7N9 219 aa6.32□□□□□ -1.4
ZNF540-201ENST00000316433 ZNF227Q86WZ6 799 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms