RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 OXR1Q8N573 874 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 OR2L3Q8NG85 312 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 NFKBIDQ8NI38 313 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 SPPL2AQ8TCT8 520 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 APH1BQ8WW43 257 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 NEDD4LQ96PU5 975 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 SH3GL1Q99961 368 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 COPS4Q9BT78 406 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 C1QTNF7Q9BXJ2 289 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 UBE2ZQ9H832 354 aaPredicted RBP7.21□□□□□ -1.26
TRIM55-202ENST00000315962 GORASP2Q9H8Y8 452 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 CAPN10Q9HC96 672 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 ATG4BQ9Y4P1 393 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 UGT2A1Q9Y4X1 527 aa7.21□□□□□ -1.26
TRIM55-202ENST00000315962 SCN2AQ99250 2005 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 LOC105369274A0A096LPK9 316 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 LOC102723532A0A0G2JNH3 316 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 LRIT2A6NDA9 550 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 B4DGG1 531 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 J3KTA2 159 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 FOXE1O00358 373 aaPredicted RBP7.2□□□□□ -1.26
TRIM55-202ENST00000315962 RGS5O15539 181 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 HPRP00739 348 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 IGHV4-34P06331 123 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 ADRA2AP08913 450 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 PTNP21246 168 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 PRPH2P23942 346 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 KDELR2P33947 212 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 GABARAPL2P60520 117 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 BTN3A2P78410 334 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 GANABQ14697 944 aaKnown RBP7.2□□□□□ -1.26
TRIM55-202ENST00000315962 MAD2L1BPQ15013 274 aaPredicted RBP7.2□□□□□ -1.26
TRIM55-202ENST00000315962 FXNQ16595 210 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 SPDYE7PQ495Y7 208 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 DEFB134Q4QY38 66 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 TJAP1Q5JTD0 557 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 NDUFAF5Q5TEU4 345 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 OR2T5Q6IEZ7 315 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 LCTLQ6UWM7 567 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 CCBE1Q6UXH8 406 aaPredicted RBP7.2□□□□□ -1.26
TRIM55-202ENST00000315962 PRSS41Q7RTY9 318 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 C11orf74Q86VG3 221 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 P3H2Q8IVL5 708 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 TRIM48Q8IWZ4 208 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 ENTHD1Q8IYW4 607 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 OR4N4Q8N0Y3 316 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 METTL4Q8N3J2 472 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 FBXO15Q8NCQ5 510 aaPredicted RBP7.2□□□□□ -1.26
TRIM55-202ENST00000315962 FAM46DQ8NEK8 389 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 OR2T29Q8NH02 315 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 VANGL1Q8TAA9 524 aaPredicted RBP7.2□□□□□ -1.26
TRIM55-202ENST00000315962 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.2□□□□□ -1.26
TRIM55-202ENST00000315962 TM4SF18Q96CE8 201 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 DHRS1Q96LJ7 313 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 CXorf36Q9H7Y0 433 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 EXOSC4Q9NPD3 245 aaKnown RBP7.2□□□□□ -1.26
TRIM55-202ENST00000315962 CTPS2Q9NRF8 586 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 THUMPD1Q9NXG2 353 aaKnown RBP7.2□□□□□ -1.26
TRIM55-202ENST00000315962 ASIC5Q9NY37 505 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 KLHL3Q9UH77 587 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 RAB23Q9ULC3 237 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 TPRKBQ9Y3C4 175 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 PCDHB11Q9Y5F2 797 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 SNRNP200O75643 2136 aaKnown RBP7.2□□□□□ -1.26
TRIM55-202ENST00000315962 LRRC72A6NJI9 287 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 M0QX08 132 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 M0R082 166 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 DSCR3O14972 297 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 LRRTM2O43300 516 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 ASNA1O43681 348 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 CTSVO60911 334 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 GUCY1B2O75343 617 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 GCM2O75603 506 aaPredicted RBP7.2□□□□□ -1.26
TRIM55-202ENST00000315962 UPK1BO75841 260 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 PTHP01270 115 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 DCNP07585 359 aaKnown RBP7.2□□□□□ -1.26
TRIM55-202ENST00000315962 POU1F1P28069 291 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 BSGP35613 385 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 MXD1Q05195 221 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 SLAMF1Q13291 335 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 TIGD6Q17RP2 521 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 ZNF404Q494X3 552 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.2□□□□□ -1.26
TRIM55-202ENST00000315962 KLHDC8AQ8IYD2 350 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 ZZZ3Q8IYH5 903 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 OR8H2Q8N162 312 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 SVOPLQ8N434 492 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 PARP16Q8N5Y8 322 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 KIAA1958Q8N8K9 716 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 OR9Q2Q8NGE9 314 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 RHOXF1Q8NHV9 184 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 CNDP2Q96KP4 475 aaKnown RBP7.2□□□□□ -1.26
TRIM55-202ENST00000315962 WDR92Q96MX6 357 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 SLC6A18Q96N87 628 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 TTYH2Q9BSA4 534 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 MS4A8Q9BY19 250 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 QRSL1Q9H0R6 528 aaKnown RBP7.2□□□□□ -1.26
TRIM55-202ENST00000315962 C8orf4Q9NR00 106 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 ADPRHL2Q9NX46 363 aa7.2□□□□□ -1.26
TRIM55-202ENST00000315962 MMP17Q9ULZ9 603 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms