RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 TRAM1Q15629 374 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 MAPK14Q16539 360 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 CTSL3PQ5NE16 218 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 ARHGAP40Q5TG30 622 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 CEACAM19Q7Z692 300 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 AMIGO1Q86WK6 493 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 R3HDMLQ9H3Y0 253 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 MTG2Q9H4K7 406 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 SEC61A2Q9H9S3 476 aa13.14□□□□□ -0.31
SPAST-201ENST00000315285 CHMP1AQ9HD42 196 aaPredicted RBP13.14□□□□□ -0.31
SPAST-201ENST00000315285 MYO9BQ13459 2157 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 HEPACAM2A8MVW5 462 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 ADRB3P13945 408 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 CBLP22681 906 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 MTNR1AP48039 350 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 KLBQ86Z14 1044 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 KLHDC8AQ8IYD2 350 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 ZFP41Q8N8Y5 198 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 ZNF300Q96RE9 604 aaPredicted RBP13.13□□□□□ -0.31
SPAST-201ENST00000315285 NMNAT1Q9HAN9 279 aaPredicted RBP13.13□□□□□ -0.31
SPAST-201ENST00000315285 SLAMF8Q9P0V8 285 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 PRSS21Q9Y6M0 314 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 KANTRA0A1W2PQU2 76 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 OR2AT4A6NND4 320 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 CSTAP01040 98 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 HSD11B1P28845 292 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 RBM34P42696 430 aaKnown RBP13.13□□□□□ -0.31
SPAST-201ENST00000315285 GPR4P46093 362 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 SOX2P48431 317 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 RNF144AP50876 292 aaPredicted RBP13.13□□□□□ -0.31
SPAST-201ENST00000315285 CAMK1Q14012 370 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 SLC44A3Q8N4M1 653 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 PNLDC1Q8NA58 520 aaKnown RBP13.13□□□□□ -0.31
SPAST-201ENST00000315285 ZNF296Q8WUU4 475 aaPredicted RBP13.13□□□□□ -0.31
SPAST-201ENST00000315285 MNTQ99583 582 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 WDR83Q9BRX9 315 aaKnown RBP13.13□□□□□ -0.31
SPAST-201ENST00000315285 PRTFDC1Q9NRG1 225 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 SDHAF3Q9NRP4 125 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 RNGTTO60942 597 aaKnown RBP13.13□□□□□ -0.31
SPAST-201ENST00000315285 VIPR2P41587 438 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 RPL6Q02878 288 aaKnown RBP13.13□□□□□ -0.31
SPAST-201ENST00000315285 NDUFAF5Q5TEU4 345 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 GTF2H4Q92759 462 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 SMARCD2Q92925 531 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 CREB3L1Q96BA8 519 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 ENPP5Q9UJA9 477 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 OR6C74A6NCV1 312 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 RNASET2O00584 256 aaKnown RBP13.13□□□□□ -0.31
SPAST-201ENST00000315285 MRPS14O60783 128 aaKnown RBP13.13□□□□□ -0.31
SPAST-201ENST00000315285 CDC123O75794 336 aaPredicted RBP13.13□□□□□ -0.31
SPAST-201ENST00000315285 CTSAP10619 480 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 EPCAMP16422 314 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 CCR7P32248 378 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 RPS15AP62244 130 aaKnown RBP13.13□□□□□ -0.31
SPAST-201ENST00000315285 TMEM17Q86X19 198 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 INO80EQ8NBZ0 244 aaPredicted RBP13.13□□□□□ -0.31
SPAST-201ENST00000315285 OR6N2Q8NGY6 317 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 THRSPQ92748 146 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 CIDECQ96AQ7 238 aaPredicted RBP13.13□□□□□ -0.31
SPAST-201ENST00000315285 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.13□□□□□ -0.31
SPAST-201ENST00000315285 RNF38Q9H0F5 515 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 MEMO1Q9Y316 297 aa13.13□□□□□ -0.31
SPAST-201ENST00000315285 CD8B2A6NJW9 211 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 SLC22A31A6NKX4 558 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 L7N2F9 121 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 EEF1E1O43324 174 aaKnown RBP13.12□□□□□ -0.31
SPAST-201ENST00000315285 NUAK1O60285 661 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 FCER2P06734 321 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 GSTT2P0CG29 244 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 CD8BP10966 210 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 PGAM2P15259 253 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 NAA10P41227 235 aaPredicted RBP13.12□□□□□ -0.31
SPAST-201ENST00000315285 SLC6A9P48067 706 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 HSD17B12Q53GQ0 312 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 RPS26P11Q5JNZ5 115 aaPredicted RBP13.12□□□□□ -0.31
SPAST-201ENST00000315285 PIWIL3Q7Z3Z3 882 aaKnown RBP13.12□□□□□ -0.31
SPAST-201ENST00000315285 TMED4Q7Z7H5 227 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 TMEM151AQ8N4L1 468 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 NDNFQ8TB73 568 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 LMX1AQ8TE12 382 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 AKAP1Q92667 903 aaKnown RBP eCLIP13.12□□□□□ -0.31
SPAST-201ENST00000315285 NEIL2Q969S2 332 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 PDLIM5Q96HC4 596 aaKnown RBP13.12□□□□□ -0.31
SPAST-201ENST00000315285 HDHD5Q9BXW7 423 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 LINC00597Q9H2U6 94 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 CLMPQ9H6B4 373 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 PRODH2Q9UF12 536 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 LRP5O75197 1615 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 C7orf72A4D263 438 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 I3L521 148 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 KLF8O95600 359 aaPredicted RBP13.12□□□□□ -0.31
SPAST-201ENST00000315285 CYB5AP00167 134 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 PORP16435 677 aaPredicted RBP13.12□□□□□ -0.31
SPAST-201ENST00000315285 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.12□□□□□ -0.31
SPAST-201ENST00000315285 MMABQ96EY8 250 aaPredicted RBP13.12□□□□□ -0.31
SPAST-201ENST00000315285 KLHDC7BQ96G42 594 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 G6PC3Q9BUM1 346 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 CCDC32Q9BV29 185 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 SLC6A15Q9H2J7 730 aa13.12□□□□□ -0.31
SPAST-201ENST00000315285 A0A0G2JPF8 293 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms