RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 TMEM38AQ9H6F2 299 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 MIEF1Q9NQG6 463 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 DIMT1Q9UNQ2 313 aaKnown RBP13.93□□□□□ -0.18
COL6A2-202ENST00000310645 PCDHGB7Q9Y5F8 929 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 GPR37L1O60883 481 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 TRIM3O75382 744 aaPredicted RBP13.93□□□□□ -0.18
COL6A2-202ENST00000310645 PCSK2P16519 638 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 SERPINA4P29622 427 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 PTSQ03393 145 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 SF3A2Q15428 464 aaKnown RBP13.93□□□□□ -0.18
COL6A2-202ENST00000310645 SYTL3Q4VX76 610 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 MORN1Q5T089 497 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 BRAT1Q6PJG6 821 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 GPR32P1Q8NGA4 272 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 NEIL3Q8TAT5 605 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 KIAA1143Q96AT1 154 aaPredicted RBP13.93□□□□□ -0.18
COL6A2-202ENST00000310645 OTULINQ96BN8 352 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 MAGEB10Q96LZ2 347 aaPredicted RBP13.93□□□□□ -0.18
COL6A2-202ENST00000310645 TRPM5Q9NZQ8 1165 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 EXTL2Q9UBQ6 330 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 ITM2BQ9Y287 266 aa13.93□□□□□ -0.18
COL6A2-202ENST00000310645 ZNF197O14709 1029 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 PDPK1O15530 556 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 AKR1A1P14550 325 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 CCT3P49368 545 aaKnown RBP13.92□□□□□ -0.18
COL6A2-202ENST00000310645 DGKGP49619 791 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 PER3P56645 1201 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 RPA4Q13156 261 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 CLEC12AQ5QGZ9 265 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 IDNKQ5T6J7 187 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 GRHL2Q6ISB3 625 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 GHDCQ8N2G8 530 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 TMEM163Q8TC26 289 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 SLC38A5Q8WUX1 472 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 MRPS31Q92665 395 aaKnown RBP13.92□□□□□ -0.18
COL6A2-202ENST00000310645 TMEM19Q96HH6 336 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 NLNQ9BYT8 704 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 STOX2Q9P2F5 926 aaPredicted RBP13.92□□□□□ -0.18
COL6A2-202ENST00000310645 ZNF624Q9P2J8 865 aaPredicted RBP13.92□□□□□ -0.18
COL6A2-202ENST00000310645 AP1M2Q9Y6Q5 423 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 SHISA3A0PJX4 238 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 LANCL1O43813 399 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 CH25HO95992 272 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 PCBP3P57721 371 aaKnown RBP13.92□□□□□ -0.18
COL6A2-202ENST00000310645 GPR176Q14439 515 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 TMEM201Q5SNT2 666 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 TEX261Q6UWH6 196 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 HORMAD2Q8N7B1 307 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 PLD4Q96BZ4 506 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 ATF6BQ99941 703 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 C17orf62Q9BQA9 187 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 C5AR2Q9P296 337 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 CDH10Q9Y6N8 788 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 U3KQ87 197 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 LOC105369274A0A096LPK9 316 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.92□□□□□ -0.18
COL6A2-202ENST00000310645 SNTNA6NMZ2 147 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 H0YIV9 168 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 M0R3H8 397 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 DVL2O14641 736 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 SGTAO43765 313 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 LALBAP00709 142 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 EPHX1P07099 455 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 FURINP09958 794 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 FAM157BP0CG42 384 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 ACADMP11310 421 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 GIPRP48546 466 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 MAP4K2Q12851 820 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 MED27Q6P2C8 311 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 DDX53Q86TM3 631 aaKnown RBP13.92□□□□□ -0.18
COL6A2-202ENST00000310645 IQCHQ86VS3 1027 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 OR4N4Q8N0Y3 316 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 OR4D11Q8NGI4 311 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 C16orf78Q8WTQ4 265 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 C2orf49Q9BVC5 232 aaPredicted RBP13.92□□□□□ -0.18
COL6A2-202ENST00000310645 RSPO3Q9BXY4 272 aaPredicted RBP13.92□□□□□ -0.18
COL6A2-202ENST00000310645 ABCG5Q9H222 651 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 BEX1Q9HBH7 125 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 CLEC4EQ9ULY5 219 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 CLEC4AQ9UMR7 237 aa13.92□□□□□ -0.18
COL6A2-202ENST00000310645 IL3P08700 152 aa13.91□□□□□ -0.18
COL6A2-202ENST00000310645 OR12D1P0DN82 309 aa13.91□□□□□ -0.18
COL6A2-202ENST00000310645 ATP6V1E1P36543 226 aa13.91□□□□□ -0.18
COL6A2-202ENST00000310645 SOX9P48436 509 aa13.91□□□□□ -0.18
COL6A2-202ENST00000310645 QSOX2Q6ZRP7 698 aa13.91□□□□□ -0.18
COL6A2-202ENST00000310645 TPRG1Q6ZUI0 275 aa13.91□□□□□ -0.18
COL6A2-202ENST00000310645 PLEKHM3Q6ZWE6 761 aa13.91□□□□□ -0.18
COL6A2-202ENST00000310645 COMMD7Q86VX2 200 aa13.91□□□□□ -0.18
COL6A2-202ENST00000310645 C2orf73Q8N5S3 287 aaPredicted RBP13.91□□□□□ -0.18
COL6A2-202ENST00000310645 ASZ1Q8WWH4 475 aa13.91□□□□□ -0.18
COL6A2-202ENST00000310645 PMEPA1Q969W9 287 aa13.91□□□□□ -0.18
COL6A2-202ENST00000310645 SLC6A16Q9GZN6 736 aa13.91□□□□□ -0.18
COL6A2-202ENST00000310645 ZDHHC6Q9H6R6 413 aa13.91□□□□□ -0.18
COL6A2-202ENST00000310645 CXorf36Q9H7Y0 433 aa13.91□□□□□ -0.18
COL6A2-202ENST00000310645 NUDT15Q9NV35 164 aa13.91□□□□□ -0.18
COL6A2-202ENST00000310645 EIF3KQ9UBQ5 218 aaKnown RBP13.91□□□□□ -0.18
COL6A2-202ENST00000310645 IGSF6O95976 241 aa13.91□□□□□ -0.18
COL6A2-202ENST00000310645 OR1D2P34982 312 aa13.91□□□□□ -0.18
COL6A2-202ENST00000310645 SLBPQ14493 270 aaKnown RBP eCLIP13.91□□□□□ -0.18
COL6A2-202ENST00000310645 ZNF791Q3KP31 576 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms