RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 ATOH1Q92858 354 aaPredicted RBP16.46■□□□□ 0.23
KRT28-201ENST00000306658 PPWD1Q96BP3 646 aaKnown RBP16.46■□□□□ 0.23
KRT28-201ENST00000306658 OR6C1Q96RD1 312 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 SEPHS2Q99611 448 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 PRRX2Q99811 253 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 SLC7A5P2Q9GIP4 190 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 DDX18Q9NVP1 670 aaKnown RBP16.46■□□□□ 0.23
KRT28-201ENST00000306658 PTGFRNQ9P2B2 879 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 DHCR7Q9UBM7 475 aaKnown RBP16.46■□□□□ 0.23
KRT28-201ENST00000306658 RPS6KA6Q9UK32 745 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 RARRES3Q9UL19 164 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 TMEM184BQ9Y519 407 aaPredicted RBP16.46■□□□□ 0.23
KRT28-201ENST00000306658 MAU2Q9Y6X3 613 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 WDR87Q6ZQQ6 2873 aa16.46■□□□□ 0.23
KRT28-201ENST00000306658 DMDP11532 3685 aa16.46■□□□□ 0.22
KRT28-201ENST00000306658 COL5A1P20908 1838 aaPredicted RBP16.45■□□□□ 0.22
KRT28-201ENST00000306658 A0A1B0GX78 115 aa16.45■□□□□ 0.22
KRT28-201ENST00000306658 TMEM247A6NEH6 219 aa16.45■□□□□ 0.22
KRT28-201ENST00000306658 ARAFP10398 606 aa16.45■□□□□ 0.22
KRT28-201ENST00000306658 FCGR1AP12314 374 aa16.45■□□□□ 0.22
KRT28-201ENST00000306658 MATN1P21941 496 aa16.45■□□□□ 0.22
KRT28-201ENST00000306658 CSTF2P33240 577 aaKnown RBP eCLIP16.45■□□□□ 0.22
KRT28-201ENST00000306658 PTGER1P34995 402 aa16.45■□□□□ 0.22
KRT28-201ENST00000306658 XCR1P46094 333 aa16.45■□□□□ 0.22
KRT28-201ENST00000306658 HSD17B7P56937 341 aa16.45■□□□□ 0.22
KRT28-201ENST00000306658 RPS26P62854 115 aaKnown RBP16.45■□□□□ 0.22
KRT28-201ENST00000306658 STX4Q12846 297 aa16.45■□□□□ 0.22
KRT28-201ENST00000306658 LTB4RQ15722 352 aa16.45■□□□□ 0.22
KRT28-201ENST00000306658 SYT16Q17RD7 645 aa16.45■□□□□ 0.22
KRT28-201ENST00000306658 LRRC23Q53EV4 343 aaPredicted RBP16.45■□□□□ 0.22
KRT28-201ENST00000306658 BPHLQ86WA6 291 aaPredicted RBP16.45■□□□□ 0.22
KRT28-201ENST00000306658 SHISA5Q8N114 240 aa16.45■□□□□ 0.22
KRT28-201ENST00000306658 NUP43Q8NFH3 380 aa16.45■□□□□ 0.22
KRT28-201ENST00000306658 RNF145Q96MT1 663 aa16.45■□□□□ 0.22
KRT28-201ENST00000306658 RBCK1Q9BYM8 510 aa16.45■□□□□ 0.22
KRT28-201ENST00000306658 VCX3BQ9H321 246 aa16.45■□□□□ 0.22
KRT28-201ENST00000306658 YY1AP1Q9H869 796 aa16.45■□□□□ 0.22
KRT28-201ENST00000306658 ZNF304Q9HCX3 659 aa16.45■□□□□ 0.22
KRT28-201ENST00000306658 PRTFDC1Q9NRG1 225 aa16.45■□□□□ 0.22
KRT28-201ENST00000306658 NTMQ9P121 344 aa16.45■□□□□ 0.22
KRT28-201ENST00000306658 ASCC3Q8N3C0 2202 aaKnown RBP16.45■□□□□ 0.22
KRT28-201ENST00000306658 HMGN2P05204 90 aaKnown RBP16.44■□□□□ 0.22
KRT28-201ENST00000306658 IFI6P09912 130 aa16.44■□□□□ 0.22
KRT28-201ENST00000306658 RAP2AP10114 183 aa16.44■□□□□ 0.22
KRT28-201ENST00000306658 CD59P13987 128 aa16.44■□□□□ 0.22
KRT28-201ENST00000306658 NT5EP21589 574 aa16.44■□□□□ 0.22
KRT28-201ENST00000306658 KHKP50053 298 aa16.44■□□□□ 0.22
KRT28-201ENST00000306658 BIKQ13323 160 aa16.44■□□□□ 0.22
KRT28-201ENST00000306658 DSG2Q14126 1118 aa16.44■□□□□ 0.22
KRT28-201ENST00000306658 PRAMEF17Q5VTA0 474 aa16.44■□□□□ 0.22
KRT28-201ENST00000306658 NFKBIDQ8NI38 313 aa16.44■□□□□ 0.22
KRT28-201ENST00000306658 MIPOL1Q8TD10 442 aa16.44■□□□□ 0.22
KRT28-201ENST00000306658 NRG4Q8WWG1 115 aa16.44■□□□□ 0.22
KRT28-201ENST00000306658 OR1F2PQ96R84 312 aa16.44■□□□□ 0.22
KRT28-201ENST00000306658 PKP2Q99959 881 aa16.44■□□□□ 0.22
KRT28-201ENST00000306658 EDEM2Q9BV94 578 aa16.44■□□□□ 0.22
KRT28-201ENST00000306658 YIPF2Q9BWQ6 316 aa16.44■□□□□ 0.22
KRT28-201ENST00000306658 OR51I1Q9H343 314 aa16.44■□□□□ 0.22
KRT28-201ENST00000306658 A4GALTQ9NPC4 353 aa16.44■□□□□ 0.22
KRT28-201ENST00000306658 TMEM9BQ9NQ34 198 aa16.44■□□□□ 0.22
KRT28-201ENST00000306658 TRPC4Q9UBN4 977 aa16.44■□□□□ 0.22
KRT28-201ENST00000306658 RIMS3Q9UJD0 308 aa16.44■□□□□ 0.22
KRT28-201ENST00000306658 ANGPT4Q9Y264 503 aa16.44■□□□□ 0.22
KRT28-201ENST00000306658 V9GYQ6 96 aa16.44■□□□□ 0.22
KRT28-201ENST00000306658 ADAMTS20P59510 1910 aa16.44■□□□□ 0.22
KRT28-201ENST00000306658 A0A087WV62 115 aa16.43■□□□□ 0.22
KRT28-201ENST00000306658 C5orf58C9J3I9 102 aa16.43■□□□□ 0.22
KRT28-201ENST00000306658 UPK1AO00322 258 aa16.43■□□□□ 0.22
KRT28-201ENST00000306658 HMGN4O00479 90 aa16.43■□□□□ 0.22
KRT28-201ENST00000306658 CASQ2O14958 399 aaPredicted RBP16.43■□□□□ 0.22
KRT28-201ENST00000306658 OR10H2O60403 315 aa16.43■□□□□ 0.22
KRT28-201ENST00000306658 TIPRLO75663 272 aa16.43■□□□□ 0.22
KRT28-201ENST00000306658 PRKD3O94806 890 aa16.43■□□□□ 0.22
KRT28-201ENST00000306658 IFNA14P01570 189 aa16.43■□□□□ 0.22
KRT28-201ENST00000306658 FBLP22087 321 aaKnown RBP16.43■□□□□ 0.22
KRT28-201ENST00000306658 FASP25445 335 aa16.43■□□□□ 0.22
KRT28-201ENST00000306658 OR1D4P47884 311 aa16.43■□□□□ 0.22
KRT28-201ENST00000306658 MAPK10P53779 464 aa16.43■□□□□ 0.22
KRT28-201ENST00000306658 MRPS35P82673 323 aaKnown RBP16.43■□□□□ 0.22
KRT28-201ENST00000306658 EEF1A2Q05639 463 aaKnown RBP16.43■□□□□ 0.22
KRT28-201ENST00000306658 SPEM2Q0P670 501 aa16.43■□□□□ 0.22
KRT28-201ENST00000306658 TRIP10Q15642 601 aa16.43■□□□□ 0.22
KRT28-201ENST00000306658 ZNF628Q5EBL2 1059 aa16.43■□□□□ 0.22
KRT28-201ENST00000306658 RHBDD2Q6NTF9 364 aa16.43■□□□□ 0.22
KRT28-201ENST00000306658 REEP3Q6NUK4 255 aa16.43■□□□□ 0.22
KRT28-201ENST00000306658 ENPP6Q6UWR7 440 aa16.43■□□□□ 0.22
KRT28-201ENST00000306658 MED25Q71SY5 747 aa16.43■□□□□ 0.22
KRT28-201ENST00000306658 NAXDQ8IW45 347 aa16.43■□□□□ 0.22
KRT28-201ENST00000306658 LILRA2Q8N149 483 aa16.43■□□□□ 0.22
KRT28-201ENST00000306658 OR2L13Q8N349 312 aa16.43■□□□□ 0.22
KRT28-201ENST00000306658 METTL25Q8N6Q8 603 aa16.43■□□□□ 0.22
KRT28-201ENST00000306658 OR7G2Q8NG99 324 aa16.43■□□□□ 0.22
KRT28-201ENST00000306658 ZNF675Q8TD23 568 aa16.43■□□□□ 0.22
KRT28-201ENST00000306658 LRTOMTQ8WZ04 291 aa16.43■□□□□ 0.22
KRT28-201ENST00000306658 RBM18Q96H35 190 aaKnown RBP16.43■□□□□ 0.22
KRT28-201ENST00000306658 PYURFQ96I23 114 aa16.43■□□□□ 0.22
KRT28-201ENST00000306658 MAGIXQ9H6Y5 334 aa16.43■□□□□ 0.22
KRT28-201ENST00000306658 ADPRHL2Q9NX46 363 aa16.43■□□□□ 0.22
KRT28-201ENST00000306658 ZNF451Q9Y4E5 1061 aa16.43■□□□□ 0.22
KRT28-201ENST00000306658 PLOD3O60568 738 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms