RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 RELTQ969Z4 430 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 RFT1Q96AA3 541 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 SRMSQ9H3Y6 488 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 BRF2Q9HAW0 419 aa12.66□□□□□ -0.38
DDX54-201ENST00000306014 MEIOCA2RUB1 952 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 H7C0S8 307 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 RASGRP1O95267 797 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 F8A1P23610 371 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 GBX2P52951 348 aaPredicted RBP12.65□□□□□ -0.38
DDX54-201ENST00000306014 WFIKKN2Q8TEU8 576 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 MYLIPQ8WY64 445 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 AKAP1Q92667 903 aaKnown RBP eCLIP12.65□□□□□ -0.38
DDX54-201ENST00000306014 FOXJ1Q92949 421 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 TCF7L1Q9HCS4 588 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 SPHK2Q9NRA0 654 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 ANKRD31Q8N7Z5 1873 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 GCGRP47871 477 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 DSC1Q08554 894 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 TMCO2Q7Z6W1 182 aaPredicted RBP12.65□□□□□ -0.38
DDX54-201ENST00000306014 LYSMD2Q8IV50 215 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 HDDC3Q8N4P3 179 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 OR5M11Q96RB7 305 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 RHNO1Q9BSD3 238 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 SOHLH2Q9NX45 425 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 FKBP7Q9Y680 259 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 ARHGAP33O14559 1287 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 RCBTB2O95199 551 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 PEPDP12955 493 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 ZNF3P17036 446 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 CASP3P42574 277 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 GPR4P46093 362 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 ZNF81P51508 661 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 RHAGQ02094 409 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 DHRS4L2Q6PKH6 230 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 GDPGP1Q6ZNW5 385 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 SLC46A3Q7Z3Q1 461 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 ELMOD2Q8IZ81 293 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 VWA5B2Q8N398 1253 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 ZNF563Q8TA94 476 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 BBS10Q8TAM1 723 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 SLC6A16Q9GZN6 736 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 RNF121Q9H920 327 aa12.65□□□□□ -0.38
DDX54-201ENST00000306014 ASPDHA6ND91 283 aa12.65□□□□□ -0.39
DDX54-201ENST00000306014 B3GALT2O43825 422 aa12.65□□□□□ -0.39
DDX54-201ENST00000306014 REM1O75628 298 aa12.65□□□□□ -0.39
DDX54-201ENST00000306014 IFNA7P01567 189 aa12.65□□□□□ -0.39
DDX54-201ENST00000306014 CHMP24386 653 aa12.65□□□□□ -0.39
DDX54-201ENST00000306014 PDHA2P29803 388 aa12.65□□□□□ -0.39
DDX54-201ENST00000306014 PTGER1P34995 402 aa12.65□□□□□ -0.39
DDX54-201ENST00000306014 EMP3P54852 163 aa12.65□□□□□ -0.39
DDX54-201ENST00000306014 ID2Q02363 134 aa12.65□□□□□ -0.39
DDX54-201ENST00000306014 ZNF33BQ06732 778 aa12.65□□□□□ -0.39
DDX54-201ENST00000306014 PYCR3Q53H96 274 aa12.65□□□□□ -0.39
DDX54-201ENST00000306014 VRK3Q8IV63 474 aa12.65□□□□□ -0.39
DDX54-201ENST00000306014 SLITRK4Q8IW52 837 aa12.65□□□□□ -0.39
DDX54-201ENST00000306014 SAMD14Q8IZD0 417 aaPredicted RBP12.65□□□□□ -0.39
DDX54-201ENST00000306014 RBM18Q96H35 190 aaKnown RBP12.65□□□□□ -0.39
DDX54-201ENST00000306014 NIPSNAP1Q9BPW8 284 aa12.65□□□□□ -0.39
DDX54-201ENST00000306014 FUZQ9BT04 418 aa12.65□□□□□ -0.39
DDX54-201ENST00000306014 PPT2Q9UMR5 302 aa12.65□□□□□ -0.39
DDX54-201ENST00000306014 INSL6Q9Y581 213 aa12.65□□□□□ -0.39
DDX54-201ENST00000306014 GFRA2O00451 464 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 TOXO94900 526 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 PEX11BO96011 259 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 SERPINA3P01011 423 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 ERP29P30040 261 aaKnown RBP12.64□□□□□ -0.39
DDX54-201ENST00000306014 PRKCDQ05655 676 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 MAP4K2Q12851 820 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 BTLAQ7Z6A9 289 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 GDPD1Q8N9F7 314 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 OR8J2Q8NGG1 315 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 TSEN15Q8WW01 171 aaKnown RBP12.64□□□□□ -0.39
DDX54-201ENST00000306014 ZNF419Q96HQ0 510 aaPredicted RBP12.64□□□□□ -0.39
DDX54-201ENST00000306014 C1QTNF3Q9BXJ4 246 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 P2RY12Q9H244 342 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 RNF167Q9H6Y7 350 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 CERS4Q9HA82 394 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 ZSCAN32Q9NX65 697 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 NLGN3Q9NZ94 848 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 MRPS33Q9Y291 106 aaKnown RBP12.64□□□□□ -0.39
DDX54-201ENST00000306014 OR2A25A4D2G3 310 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 SULT1C4O75897 302 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 FCER2P06734 321 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 BMP8BP34820 402 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 GUCA1AP43080 201 aaPredicted RBP12.64□□□□□ -0.39
DDX54-201ENST00000306014 WNT4P56705 351 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 TMEM107Q6UX40 140 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 BMP8AQ7Z5Y6 402 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 ADGRD2Q7Z7M1 963 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 OR2T33Q8NG76 320 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 FAM46AQ96IP4 442 aaKnown RBP12.64□□□□□ -0.39
DDX54-201ENST00000306014 SLC22A12Q96S37 553 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 SIAEQ9HAT2 523 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 ZDHHC4Q9NPG8 344 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 ATAD5Q96QE3 1844 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 C12orf71A8MTZ7 269 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 FAM227AF5H4B4 570 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 SLC25A12O75746 678 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 MT-ND5P03915 603 aa12.64□□□□□ -0.39
DDX54-201ENST00000306014 GPX2P18283 190 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms