RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 ZNF584Q8IVC4 421 aa12.27□□□□□ -0.44
COL3A1-201ENST00000304636 B3GNT7Q8NFL0 401 aa12.27□□□□□ -0.44
COL3A1-201ENST00000304636 NLGN2Q8NFZ4 835 aa12.27□□□□□ -0.44
COL3A1-201ENST00000304636 OR4K5Q8NGD3 323 aa12.27□□□□□ -0.44
COL3A1-201ENST00000304636 OTUB2Q96DC9 234 aa12.27□□□□□ -0.44
COL3A1-201ENST00000304636 HS6ST2Q96MM7 605 aa12.27□□□□□ -0.44
COL3A1-201ENST00000304636 PRRG4Q9BZD6 226 aa12.27□□□□□ -0.44
COL3A1-201ENST00000304636 NUBP2Q9Y5Y2 271 aa12.27□□□□□ -0.44
COL3A1-201ENST00000304636 GSRP00390 522 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 UCHL1P09936 223 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 DRD2P14416 443 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 RGS6P49758 472 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 NRG3P56975 720 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 NAGSQ8N159 534 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 BEST3Q8N1M1 668 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 OR9Q2Q8NGE9 314 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 OR13F1Q8NGS4 319 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 OR2L8Q8NGY9 312 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 ZNF461Q8TAF7 563 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 TMEM19Q96HH6 336 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 ZNF300Q96RE9 604 aaPredicted RBP12.27□□□□□ -0.45
COL3A1-201ENST00000304636 GSKIPQ9P0R6 139 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 A0A1W2PPK0 400 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 NPIPA5E9PKD4 350 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 GPR32O75388 356 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 ZNF26P17031 533 aaPredicted RBP12.27□□□□□ -0.45
COL3A1-201ENST00000304636 UQCRC1P31930 480 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 SLC11A1P49279 550 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 RAB5BP61020 215 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 MANEALQ5VSG8 457 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 AGAP7PQ5VUJ5 663 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 OR52P1PQ8NH57 321 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 SLC38A3Q99624 504 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 SLC12A9Q9BXP2 914 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 OR10A4Q9H209 315 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 SERINC1Q9NRX5 453 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 TAS2R8Q9NYW2 309 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 NPIPA1Q9UND3 350 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 AXIN1O15169 862 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 PRSS56P0CW18 603 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 CCND3P30281 292 aaPredicted RBP12.27□□□□□ -0.45
COL3A1-201ENST00000304636 ADH7P40394 386 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 ARF3P61204 181 aaPredicted RBP12.27□□□□□ -0.45
COL3A1-201ENST00000304636 ARF1P84077 181 aaKnown RBP12.27□□□□□ -0.45
COL3A1-201ENST00000304636 NOGQ13253 232 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 FAM86B1Q8N7N1 296 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 MZB1Q8WU39 189 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 MYNNQ9NPC7 610 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 TMEM98Q9Y2Y6 226 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 PCDHGA2Q9Y5H1 932 aa12.27□□□□□ -0.45
COL3A1-201ENST00000304636 HEMK1Q9Y5R4 338 aaPredicted RBP12.27□□□□□ -0.45
COL3A1-201ENST00000304636 C1orf226A1L170 272 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 ZNF726A6NNF4 738 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 FKTNO75072 461 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 VNN2O95498 520 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 PTNP21246 168 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 PRKACBP22694 351 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 FRKP42685 505 aaPredicted RBP12.26□□□□□ -0.45
COL3A1-201ENST00000304636 RPS26P62854 115 aaKnown RBP12.26□□□□□ -0.45
COL3A1-201ENST00000304636 FAM189BP81408 668 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 SNTA1Q13424 505 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 GAS6Q14393 721 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 CCDC58Q4VC31 144 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 CHADLQ6NUI6 762 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 NXPE4Q6UWF7 544 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 ENPP7Q6UWV6 458 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 UNC5DQ6UXZ4 953 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 OR2T35Q8NGX2 323 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 OR6N2Q8NGY6 317 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 CD300LFQ8TDQ1 290 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 SCAMP4Q969E2 229 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 COQ10AQ96MF6 247 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 HIST1H2AAQ96QV6 131 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 PNO1Q9NRX1 252 aaKnown RBP12.26□□□□□ -0.45
COL3A1-201ENST00000304636 IL37Q9NZH6 218 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 AQP9O43315 295 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 UGDHO60701 494 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 ETV3P41162 512 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 SFRP4Q6FHJ7 346 aaPredicted RBP12.26□□□□□ -0.45
COL3A1-201ENST00000304636 NPLOC4Q8TAT6 608 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 POLDIP3Q9BY77 421 aaKnown RBP12.26□□□□□ -0.45
COL3A1-201ENST00000304636 ATG5Q9H1Y0 275 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 KLHL9Q9P2J3 617 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 TYRP14679 529 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 KCNC1P48547 511 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 ART1P52961 327 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 USF2Q15853 346 aaPredicted RBP12.26□□□□□ -0.45
COL3A1-201ENST00000304636 ARHGAP11AQ6P4F7 1023 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 CLEC14AQ86T13 490 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 TMPRSS12Q86WS5 348 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 OR8K3Q8NH51 312 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 MAFIPQ8WZ33 124 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 ECHDC3Q96DC8 303 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 ACSL5Q9ULC5 683 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 NRXN3Q9Y4C0 1643 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 TOPAZ1Q8N9V7 1692 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 H3BSH0 61 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 PLATP00750 562 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 CSTBP04080 98 aaKnown RBP12.26□□□□□ -0.45
COL3A1-201ENST00000304636 ZNF14P17017 642 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms