RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 ZNF438Q7Z4V0 828 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 VTCN1Q7Z7D3 282 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 GALNT10Q86SR1 603 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 MCATQ8IVS2 390 aaKnown RBP11.3□□□□□ -0.6
TPM3-202ENST00000302206 CCDC116Q8IYX3 515 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 MAML2Q8IZL2 1156 aaPredicted RBP11.3□□□□□ -0.6
TPM3-202ENST00000302206 LRRC25Q8N386 305 aaPredicted RBP11.3□□□□□ -0.6
TPM3-202ENST00000302206 SLC38A5Q8WUX1 472 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 RASSF5Q8WWW0 418 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 GEMIN6Q8WXD5 167 aaKnown RBP11.3□□□□□ -0.6
TPM3-202ENST00000302206 ELP4Q96EB1 424 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 TPD52L3Q96J77 140 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 EPYCQ99645 322 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 TMEM121BQ9BXQ6 578 aaPredicted RBP11.3□□□□□ -0.6
TPM3-202ENST00000302206 KLHL25Q9H0H3 589 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 IL21RQ9HBE5 538 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 BCL2L10Q9HD36 194 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 P2RX2Q9UBL9 471 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 FBXO4Q9UKT5 387 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 ABCG2Q9UNQ0 655 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 PCDHGB3Q9Y5G1 929 aa11.3□□□□□ -0.6
TPM3-202ENST00000302206 NUP214P35658 2090 aaPredicted RBP11.3□□□□□ -0.6
TPM3-202ENST00000302206 SLC9B1P1A6NJY1 282 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 WASHC1A8K0Z3 465 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 RHPN2P1A8MT19 583 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 NUDT21O43809 227 aaKnown RBP11.29□□□□□ -0.6
TPM3-202ENST00000302206 PRAMEF10O60809 474 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 PGM3O95394 542 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 EIF2S1P05198 315 aaKnown RBP11.29□□□□□ -0.6
TPM3-202ENST00000302206 GNSP15586 552 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 AQP1P29972 269 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 PPP2R1BP30154 601 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 FEN1P39748 380 aaKnown RBP11.29□□□□□ -0.6
TPM3-202ENST00000302206 GPR3P46089 330 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 GABRA4P48169 554 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 XKP51811 444 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 RAD23AP54725 363 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 EMP3P54852 163 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 RAB38P57729 211 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 MYBPC1Q00872 1141 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 DUSP2Q05923 314 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 COL9A2Q14055 689 aaPredicted RBP11.29□□□□□ -0.6
TPM3-202ENST00000302206 NR1D2Q14995 579 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 MAPK11Q15759 364 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 NDUFA9Q16795 377 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 DEFB133Q30KQ1 61 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 INAVAQ3KP66 663 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 OTUD3Q5T2D3 398 aaPredicted RBP11.29□□□□□ -0.6
TPM3-202ENST00000302206 GARNL3Q5VVW2 1013 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 TTC23Q5W5X9 447 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 LYSMD4Q5XG99 296 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 KRT80Q6KB66 452 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 TNFAIP8L2Q6P589 184 aaPredicted RBP11.29□□□□□ -0.6
TPM3-202ENST00000302206 LGI4Q8N135 537 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 BBS10Q8TAM1 723 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 ADAMTS18Q8TE60 1221 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 TANKQ92844 425 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 ZDHHC12Q96GR4 267 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 TMEM19Q96HH6 336 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 MS4A3Q96HJ5 214 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 ZNF607Q96SK3 696 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 YTHDF1Q9BYJ9 559 aaKnown RBP11.29□□□□□ -0.6
TPM3-202ENST00000302206 OR51I1Q9H343 314 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 SERHL2Q9H4I8 314 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 REEP1Q9H902 201 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 ANKHQ9HCJ1 492 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 FAM60AQ9NP50 221 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 PTGFRNQ9P2B2 879 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 SUSD2Q9UGT4 822 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 PLCL2Q9UPR0 1127 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 LIPT1Q9Y234 373 aa11.29□□□□□ -0.6
TPM3-202ENST00000302206 MRPS2Q9Y399 296 aaKnown RBP11.29□□□□□ -0.6
TPM3-202ENST00000302206 A0A087WV62 115 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 A0A1B0GVT2 93 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 hCG_2039718K7EN88 272 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 CYR61O00622 381 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 ADAMDEC1O15204 470 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 SERPINB7O75635 380 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 DNAJB5O75953 348 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 MFN2O95140 757 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 SNAP29O95721 258 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 AGR2O95994 175 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 C9P02748 559 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 BCHEP06276 602 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 OR12D1P0DN82 309 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 CPMP14384 443 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 ETS2P15036 469 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 CD247P20963 164 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 FNTBP49356 437 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 RPS6KA3P51812 740 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 MAPK10P53779 464 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 IST1P53990 364 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 CASP9P55211 416 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 RPS26P62854 115 aaKnown RBP11.28□□□□□ -0.6
TPM3-202ENST00000302206 KCNC4Q03721 635 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 TCTE1Q5JU00 501 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 PMS2CLQ68D20 193 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 TMEM179BQ7Z7N9 219 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 KRT73Q86Y46 540 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 CA13Q8N1Q1 262 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms