RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 CACNB4O00305 520 aaPredicted RBP20.77■□□□□ 0.92
TPM4-201ENST00000300933 RPL3P39023 403 aaKnown RBP20.77■□□□□ 0.92
TPM4-201ENST00000300933 DSTNP60981 165 aa20.77■□□□□ 0.92
TPM4-201ENST00000300933 HEPACAMQ14CZ8 416 aa20.77■□□□□ 0.92
TPM4-201ENST00000300933 AGERQ15109 404 aa20.77■□□□□ 0.92
TPM4-201ENST00000300933 CLPPQ16740 277 aaPredicted RBP20.77■□□□□ 0.92
TPM4-201ENST00000300933 UAP1L1Q3KQV9 507 aa20.77■□□□□ 0.92
TPM4-201ENST00000300933 KIAA1161Q6NSJ0 714 aa20.77■□□□□ 0.92
TPM4-201ENST00000300933 OR1E3Q8WZA6 343 aa20.77■□□□□ 0.92
TPM4-201ENST00000300933 MOV10Q9HCE1 1003 aaKnown RBP20.77■□□□□ 0.92
TPM4-201ENST00000300933 ISM1B1AKI9 464 aa20.76■□□□□ 0.91
TPM4-201ENST00000300933 PGRMC2O15173 223 aa20.76■□□□□ 0.91
TPM4-201ENST00000300933 ERI3O43414 337 aaKnown RBP20.76■□□□□ 0.91
TPM4-201ENST00000300933 SSX4O60224 188 aa20.76■□□□□ 0.91
TPM4-201ENST00000300933 LIPAP38571 399 aa20.76■□□□□ 0.91
TPM4-201ENST00000300933 IL18R1Q13478 541 aa20.76■□□□□ 0.91
TPM4-201ENST00000300933 LRRC32Q14392 662 aa20.76■□□□□ 0.91
TPM4-201ENST00000300933 ZNF181Q2M3W8 571 aa20.76■□□□□ 0.91
TPM4-201ENST00000300933 NDUFAF5Q5TEU4 345 aa20.76■□□□□ 0.91
TPM4-201ENST00000300933 OR4C11Q6IEV9 310 aa20.76■□□□□ 0.91
TPM4-201ENST00000300933 NUDT13Q86X67 352 aa20.76■□□□□ 0.91
TPM4-201ENST00000300933 LILRB4Q8NHJ6 448 aa20.76■□□□□ 0.91
TPM4-201ENST00000300933 SLC38A5Q8WUX1 472 aa20.76■□□□□ 0.91
TPM4-201ENST00000300933 FBXW2Q9UKT8 454 aa20.76■□□□□ 0.91
TPM4-201ENST00000300933 PRSS38A1L453 326 aa20.76■□□□□ 0.91
TPM4-201ENST00000300933 PCDH17O14917 1159 aa20.76■□□□□ 0.91
TPM4-201ENST00000300933 MFN2O95140 757 aa20.76■□□□□ 0.91
TPM4-201ENST00000300933 JUNDP17535 347 aa20.76■□□□□ 0.91
TPM4-201ENST00000300933 UQCRC2P22695 453 aa20.76■□□□□ 0.91
TPM4-201ENST00000300933 HSD17B2P37059 387 aa20.76■□□□□ 0.91
TPM4-201ENST00000300933 EXOC3L2Q2M3D2 409 aa20.76■□□□□ 0.91
TPM4-201ENST00000300933 IFI44LQ53G44 452 aa20.76■□□□□ 0.91
TPM4-201ENST00000300933 SOWAHCQ53LP3 525 aaPredicted RBP20.76■□□□□ 0.91
TPM4-201ENST00000300933 KIAA1614Q5VZ46 1190 aa20.76■□□□□ 0.91
TPM4-201ENST00000300933 IKBIPQ70UQ0 350 aa20.76■□□□□ 0.91
TPM4-201ENST00000300933 C6orf120Q7Z4R8 191 aa20.76■□□□□ 0.91
TPM4-201ENST00000300933 MTERF3Q96E29 417 aa20.76■□□□□ 0.91
TPM4-201ENST00000300933 NIPSNAP1Q9BPW8 284 aa20.76■□□□□ 0.91
TPM4-201ENST00000300933 WFDC6Q9BQY6 131 aa20.76■□□□□ 0.91
TPM4-201ENST00000300933 PCBD2Q9H0N5 130 aa20.76■□□□□ 0.91
TPM4-201ENST00000300933 RNF167Q9H6Y7 350 aa20.76■□□□□ 0.91
TPM4-201ENST00000300933 IDH3BO43837 385 aa20.75■□□□□ 0.91
TPM4-201ENST00000300933 AIREO43918 545 aa20.75■□□□□ 0.91
TPM4-201ENST00000300933 KRT8P05787 483 aa20.75■□□□□ 0.91
TPM4-201ENST00000300933 PKLRP30613 574 aa20.75■□□□□ 0.91
TPM4-201ENST00000300933 KRT20P35900 424 aa20.75■□□□□ 0.91
TPM4-201ENST00000300933 NPRL3Q12980 569 aa20.75■□□□□ 0.91
TPM4-201ENST00000300933 RFX4Q33E94 735 aa20.75■□□□□ 0.91
TPM4-201ENST00000300933 TMEM92Q6UXU6 159 aa20.75■□□□□ 0.91
TPM4-201ENST00000300933 PRSS48Q7RTY5 328 aa20.75■□□□□ 0.91
TPM4-201ENST00000300933 SFTPA2Q8IWL1 248 aa20.75■□□□□ 0.91
TPM4-201ENST00000300933 NLGN4XQ8N0W4 816 aa20.75■□□□□ 0.91
TPM4-201ENST00000300933 RAB42Q8N4Z0 105 aa20.75■□□□□ 0.91
TPM4-201ENST00000300933 SPATA9Q9BWV2 254 aa20.75■□□□□ 0.91
TPM4-201ENST00000300933 GABARAPL1Q9H0R8 117 aa20.75■□□□□ 0.91
TPM4-201ENST00000300933 SIRT3Q9NTG7 399 aaPredicted RBP20.75■□□□□ 0.91
TPM4-201ENST00000300933 PADI2Q9Y2J8 665 aa20.75■□□□□ 0.91
TPM4-201ENST00000300933 PCDHGB3Q9Y5G1 929 aa20.75■□□□□ 0.91
TPM4-201ENST00000300933 TRBC2A0A5B9 178 aa20.75■□□□□ 0.91
TPM4-201ENST00000300933 ITGAMP11215 1152 aa20.75■□□□□ 0.91
TPM4-201ENST00000300933 GATAD2AQ86YP4 633 aa20.75■□□□□ 0.91
TPM4-201ENST00000300933 PARP16Q8N5Y8 322 aa20.75■□□□□ 0.91
TPM4-201ENST00000300933 TIMM29Q9BSF4 260 aa20.75■□□□□ 0.91
TPM4-201ENST00000300933 TMEM168Q9H0V1 697 aa20.75■□□□□ 0.91
TPM4-201ENST00000300933 PIAS3Q9Y6X2 628 aa20.75■□□□□ 0.91
TPM4-201ENST00000300933 LOC100506127A0A0U1RQW1 187 aa20.74■□□□□ 0.91
TPM4-201ENST00000300933 FADDQ13158 208 aa20.74■□□□□ 0.91
TPM4-201ENST00000300933 OR2L3Q8NG85 312 aa20.74■□□□□ 0.91
TPM4-201ENST00000300933 GTPBP3Q969Y2 492 aaKnown RBP20.74■□□□□ 0.91
TPM4-201ENST00000300933 MRGPRX1Q96LB2 322 aa20.74■□□□□ 0.91
TPM4-201ENST00000300933 GABRG3Q99928 467 aa20.74■□□□□ 0.91
TPM4-201ENST00000300933 QPCTLQ9NXS2 382 aa20.74■□□□□ 0.91
TPM4-201ENST00000300933 ATG4BQ9Y4P1 393 aa20.74■□□□□ 0.91
TPM4-201ENST00000300933 SEMA3DO95025 777 aa20.74■□□□□ 0.91
TPM4-201ENST00000300933 ARAFP10398 606 aa20.74■□□□□ 0.91
TPM4-201ENST00000300933 LTBRP36941 435 aa20.74■□□□□ 0.91
TPM4-201ENST00000300933 SLAMF1Q13291 335 aa20.74■□□□□ 0.91
TPM4-201ENST00000300933 CAMK2BQ13554 666 aa20.74■□□□□ 0.91
TPM4-201ENST00000300933 ZC3H12BQ5HYM0 836 aaKnown RBP20.74■□□□□ 0.91
TPM4-201ENST00000300933 C18orf63Q68DL7 685 aa20.74■□□□□ 0.91
TPM4-201ENST00000300933 GDPD3Q7L5L3 318 aa20.74■□□□□ 0.91
TPM4-201ENST00000300933 RBM45Q8IUH3 476 aaKnown RBP20.74■□□□□ 0.91
TPM4-201ENST00000300933 SHISA5Q8N114 240 aa20.74■□□□□ 0.91
TPM4-201ENST00000300933 TMEM19Q96HH6 336 aa20.74■□□□□ 0.91
TPM4-201ENST00000300933 MMP27Q9H306 513 aa20.74■□□□□ 0.91
TPM4-201ENST00000300933 SERHL2Q9H4I8 314 aa20.74■□□□□ 0.91
TPM4-201ENST00000300933 TMEM38AQ9H6F2 299 aa20.74■□□□□ 0.91
TPM4-201ENST00000300933 DDX28Q9NUL7 540 aaKnown RBP20.74■□□□□ 0.91
TPM4-201ENST00000300933 SLC6A14Q9UN76 642 aa20.74■□□□□ 0.91
TPM4-201ENST00000300933 OR2A25A4D2G3 310 aa20.73■□□□□ 0.91
TPM4-201ENST00000300933 METTL15A6NJ78 407 aa20.73■□□□□ 0.91
TPM4-201ENST00000300933 H3BQ06 376 aaPredicted RBP20.73■□□□□ 0.91
TPM4-201ENST00000300933 PCDHGA12O60330 932 aa20.73■□□□□ 0.91
TPM4-201ENST00000300933 RECKO95980 971 aa20.73■□□□□ 0.91
TPM4-201ENST00000300933 GADD45AP24522 165 aa20.73■□□□□ 0.91
TPM4-201ENST00000300933 GPC1P35052 558 aa20.73■□□□□ 0.91
TPM4-201ENST00000300933 HYAL2Q12891 473 aa20.73■□□□□ 0.91
TPM4-201ENST00000300933 FAHD1Q6P587 224 aa20.73■□□□□ 0.91
TPM4-201ENST00000300933 OR2L8Q8NGY9 312 aa20.73■□□□□ 0.91
TPM4-201ENST00000300933 XAGE5Q8WWM1 108 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms