RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 SERPINA4P29622 427 aa13.92□□□□□ -0.18
COL6A2-201ENST00000300527 OR1D2P34982 312 aa13.92□□□□□ -0.18
COL6A2-201ENST00000300527 NNMTP40261 264 aa13.92□□□□□ -0.18
COL6A2-201ENST00000300527 AP1S1P61966 158 aa13.92□□□□□ -0.18
COL6A2-201ENST00000300527 ZNF630Q2M218 657 aaPredicted RBP13.92□□□□□ -0.18
COL6A2-201ENST00000300527 RETSATQ6NUM9 610 aa13.92□□□□□ -0.18
COL6A2-201ENST00000300527 BHLHB9Q6PI77 547 aa13.92□□□□□ -0.18
COL6A2-201ENST00000300527 TECPR1Q7Z6L1 1165 aa13.92□□□□□ -0.18
COL6A2-201ENST00000300527 SLC7A13Q8TCU3 470 aa13.92□□□□□ -0.18
COL6A2-201ENST00000300527 C17orf62Q9BQA9 187 aa13.92□□□□□ -0.18
COL6A2-201ENST00000300527 FNDC11Q9BVV2 318 aa13.92□□□□□ -0.18
COL6A2-201ENST00000300527 KCNK12Q9HB15 430 aa13.92□□□□□ -0.18
COL6A2-201ENST00000300527 REV1Q9UBZ9 1251 aa13.92□□□□□ -0.18
COL6A2-201ENST00000300527 PPIEQ9UNP9 301 aaKnown RBP13.92□□□□□ -0.18
COL6A2-201ENST00000300527 ZNF840PA6NDX5 716 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 PDPK1O15530 556 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 POLR2CP19387 275 aaPredicted RBP13.91□□□□□ -0.18
COL6A2-201ENST00000300527 OPRD1P41143 372 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 PXNP49023 591 aaPredicted RBP13.91□□□□□ -0.18
COL6A2-201ENST00000300527 DGKGP49619 791 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 CLDN20P56880 219 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 VSX2P58304 361 aaPredicted RBP13.91□□□□□ -0.18
COL6A2-201ENST00000300527 TLE2Q04725 743 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 GPR176Q14439 515 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 ZNF628Q5EBL2 1059 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 LIPJQ5W064 366 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 REEP3Q6NUK4 255 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 HORMAD2Q8N7B1 307 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 ZNF740Q8NDX6 193 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 SLC16A10Q8TF71 515 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 DNAJA4Q8WW22 397 aaPredicted RBP13.91□□□□□ -0.18
COL6A2-201ENST00000300527 TMEM159Q96B96 161 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 MS4A4AQ96JQ5 239 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 ZFP3Q96NJ6 502 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 ENAMQ9NRM1 1142 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 PATJQ8NI35 1801 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 RNASET2O00584 256 aaKnown RBP13.91□□□□□ -0.18
COL6A2-201ENST00000300527 SGTAO43765 313 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 SERPINI2O75830 405 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 TP53P04637 393 aaPredicted RBP13.91□□□□□ -0.18
COL6A2-201ENST00000300527 ATP1B2P14415 290 aaPredicted RBP13.91□□□□□ -0.18
COL6A2-201ENST00000300527 AP2S1P53680 142 aaPredicted RBP13.91□□□□□ -0.18
COL6A2-201ENST00000300527 WDR5P61964 334 aaKnown RBP13.91□□□□□ -0.18
COL6A2-201ENST00000300527 MBTPS1Q14703 1052 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 FAM110CQ1W6H9 321 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 CCSAPQ6IQ19 270 aaPredicted RBP13.91□□□□□ -0.18
COL6A2-201ENST00000300527 PGBD2Q6P3X8 592 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 ADGRD2Q7Z7M1 963 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 C11orf24Q96F05 449 aaPredicted RBP13.91□□□□□ -0.18
COL6A2-201ENST00000300527 ZNF582Q96NG8 517 aaPredicted RBP13.91□□□□□ -0.18
COL6A2-201ENST00000300527 SLC22A12Q96S37 553 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 PTPN18Q99952 460 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 TMEM43Q9BTV4 400 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 RC3H2Q9HBD1 1191 aaKnown RBP13.91□□□□□ -0.18
COL6A2-201ENST00000300527 SPATA6Q9NWH7 488 aaPredicted RBP13.91□□□□□ -0.18
COL6A2-201ENST00000300527 B3GNT2Q9NY97 397 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 CLEC4EQ9ULY5 219 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 RABL2BQ9UNT1 228 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 SSNA1O43805 119 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 LALBAP00709 142 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 CBSLP0DN79 551 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 PIPP12273 146 aaPredicted RBP13.91□□□□□ -0.18
COL6A2-201ENST00000300527 CBSP35520 551 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 CTSOP43234 321 aaPredicted RBP13.91□□□□□ -0.18
COL6A2-201ENST00000300527 MANFP55145 182 aaKnown RBP13.91□□□□□ -0.18
COL6A2-201ENST00000300527 RAB14P61106 215 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 ZMYND11Q15326 602 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 PRSS53Q2L4Q9 553 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 MPEG1Q2M385 716 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 PLK5Q496M5 336 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 TCTN3Q6NUS6 607 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 MED27Q6P2C8 311 aa13.91□□□□□ -0.18
COL6A2-201ENST00000300527 ZNF655Q8N720 491 aaPredicted RBP13.91□□□□□ -0.18
COL6A2-201ENST00000300527 EXOSC8Q96B26 276 aaKnown RBP13.91□□□□□ -0.18
COL6A2-201ENST00000300527 SPRTNQ9H040 489 aaPredicted RBP13.91□□□□□ -0.18
COL6A2-201ENST00000300527 GBF1Q92538 1859 aa13.9□□□□□ -0.18
COL6A2-201ENST00000300527 ANHXE9PGG2 379 aa13.9□□□□□ -0.18
COL6A2-201ENST00000300527 DPM1O60762 260 aa13.9□□□□□ -0.18
COL6A2-201ENST00000300527 VNN2O95498 520 aa13.9□□□□□ -0.18
COL6A2-201ENST00000300527 ALPPL2P10696 532 aa13.9□□□□□ -0.18
COL6A2-201ENST00000300527 TALDO1P37837 337 aa13.9□□□□□ -0.18
COL6A2-201ENST00000300527 BUD31P41223 144 aaPredicted RBP13.9□□□□□ -0.18
COL6A2-201ENST00000300527 PER3P56645 1201 aa13.9□□□□□ -0.18
COL6A2-201ENST00000300527 PODNL1Q6PEZ8 512 aa13.9□□□□□ -0.18
COL6A2-201ENST00000300527 RTN4RL1Q86UN2 441 aaPredicted RBP13.9□□□□□ -0.18
COL6A2-201ENST00000300527 TMEM173Q86WV6 379 aaPredicted RBP13.9□□□□□ -0.18
COL6A2-201ENST00000300527 CPA6Q8N4T0 437 aa13.9□□□□□ -0.18
COL6A2-201ENST00000300527 SLC38A5Q8WUX1 472 aa13.9□□□□□ -0.18
COL6A2-201ENST00000300527 SIPA1Q96FS4 1042 aa13.9□□□□□ -0.18
COL6A2-201ENST00000300527 SENP5Q96HI0 755 aaPredicted RBP13.9□□□□□ -0.18
COL6A2-201ENST00000300527 ABCG4Q9H172 646 aa13.9□□□□□ -0.18
COL6A2-201ENST00000300527 CXorf36Q9H7Y0 433 aa13.9□□□□□ -0.18
COL6A2-201ENST00000300527 DIABLOQ9NR28 239 aa13.9□□□□□ -0.18
COL6A2-201ENST00000300527 RDH8Q9NYR8 311 aa13.9□□□□□ -0.18
COL6A2-201ENST00000300527 STOX2Q9P2F5 926 aaPredicted RBP13.9□□□□□ -0.18
COL6A2-201ENST00000300527 MGAT4BQ9UQ53 548 aa13.9□□□□□ -0.18
COL6A2-201ENST00000300527 KCNE2Q9Y6J6 123 aa13.9□□□□□ -0.18
COL6A2-201ENST00000300527 SHISA3A0PJX4 238 aa13.9□□□□□ -0.18
COL6A2-201ENST00000300527 ATP6V1G2-DDX39BF2Z307 99 aa13.9□□□□□ -0.18
COL6A2-201ENST00000300527 PROM1O43490 865 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms