RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 ALDH4A1P30038 563 aa24.12■■□□□ 1.45
SDCCAG3-201ENST00000298537 DNAJA1P31689 397 aaKnown RBP24.12■■□□□ 1.45
SDCCAG3-201ENST00000298537 RELAQ04206 551 aa24.12■■□□□ 1.45
SDCCAG3-201ENST00000298537 CWF19L1Q69YN2 538 aaKnown RBP24.12■■□□□ 1.45
SDCCAG3-201ENST00000298537 SLC36A4Q6YBV0 504 aa24.12■■□□□ 1.45
SDCCAG3-201ENST00000298537 HIPK1Q86Z02 1210 aa24.12■■□□□ 1.45
SDCCAG3-201ENST00000298537 METTL25Q8N6Q8 603 aa24.12■■□□□ 1.45
SDCCAG3-201ENST00000298537 POP5Q969H6 163 aaKnown RBP24.12■■□□□ 1.45
SDCCAG3-201ENST00000298537 TREX2Q9BQ50 279 aaPredicted RBP24.12■■□□□ 1.45
SDCCAG3-201ENST00000298537 EXD2Q9NVH0 621 aa24.12■■□□□ 1.45
SDCCAG3-201ENST00000298537 RHCGQ9UBD6 479 aa24.12■■□□□ 1.45
SDCCAG3-201ENST00000298537 C21orf59P57076 290 aa24.11■■□□□ 1.45
SDCCAG3-201ENST00000298537 SATL1Q86VE3 508 aa24.11■■□□□ 1.45
SDCCAG3-201ENST00000298537 MCATQ8IVS2 390 aaKnown RBP24.11■■□□□ 1.45
SDCCAG3-201ENST00000298537 SLC25A45Q8N413 288 aa24.11■■□□□ 1.45
SDCCAG3-201ENST00000298537 ARHGEF39Q8N4T4 335 aa24.11■■□□□ 1.45
SDCCAG3-201ENST00000298537 NUP43Q8NFH3 380 aa24.11■■□□□ 1.45
SDCCAG3-201ENST00000298537 REEP1Q9H902 201 aa24.11■■□□□ 1.45
SDCCAG3-201ENST00000298537 FSCN3Q9NQT6 498 aa24.11■■□□□ 1.45
SDCCAG3-201ENST00000298537 SEMA3GQ9NS98 782 aa24.11■■□□□ 1.45
SDCCAG3-201ENST00000298537 RNF215Q9Y6U7 377 aa24.11■■□□□ 1.45
SDCCAG3-201ENST00000298537 TP53BP1Q12888 1972 aaPredicted RBP24.11■■□□□ 1.45
SDCCAG3-201ENST00000298537 FGF17O60258 216 aa24.11■■□□□ 1.45
SDCCAG3-201ENST00000298537 MFN2O95140 757 aa24.11■■□□□ 1.45
SDCCAG3-201ENST00000298537 CYP4B1P13584 511 aa24.11■■□□□ 1.45
SDCCAG3-201ENST00000298537 CD247P20963 164 aa24.11■■□□□ 1.45
SDCCAG3-201ENST00000298537 RBM45Q8IUH3 476 aaKnown RBP24.11■■□□□ 1.45
SDCCAG3-201ENST00000298537 CA13Q8N1Q1 262 aa24.11■■□□□ 1.45
SDCCAG3-201ENST00000298537 RMND5BQ96G75 393 aaPredicted RBP24.11■■□□□ 1.45
SDCCAG3-201ENST00000298537 QRSL1Q9H0R6 528 aaKnown RBP24.11■■□□□ 1.45
SDCCAG3-201ENST00000298537 DUSP15Q9H1R2 295 aaPredicted RBP24.11■■□□□ 1.45
SDCCAG3-201ENST00000298537 GIMAP4Q9NUV9 329 aa24.11■■□□□ 1.45
SDCCAG3-201ENST00000298537 PHF11Q9UIL8 331 aa24.11■■□□□ 1.45
SDCCAG3-201ENST00000298537 TMEM131Q92545 1883 aa24.1■■□□□ 1.45
SDCCAG3-201ENST00000298537 GIMAP1-GIMAP5A0A087WTJ2 511 aa24.1■■□□□ 1.45
SDCCAG3-201ENST00000298537 IGHV5-51A0A0C4DH38 117 aa24.1■■□□□ 1.45
SDCCAG3-201ENST00000298537 CHRM4P08173 479 aa24.1■■□□□ 1.45
SDCCAG3-201ENST00000298537 FPR1P21462 350 aa24.1■■□□□ 1.45
SDCCAG3-201ENST00000298537 ELK4P28324 431 aa24.1■■□□□ 1.45
SDCCAG3-201ENST00000298537 EPHA2P29317 976 aa24.1■■□□□ 1.45
SDCCAG3-201ENST00000298537 AFF3P51826 1226 aaKnown RBP24.1■■□□□ 1.45
SDCCAG3-201ENST00000298537 APOFQ13790 326 aa24.1■■□□□ 1.45
SDCCAG3-201ENST00000298537 GANABQ14697 944 aaKnown RBP24.1■■□□□ 1.45
SDCCAG3-201ENST00000298537 TMEM64Q6YI46 380 aa24.1■■□□□ 1.45
SDCCAG3-201ENST00000298537 LSRQ86X29 649 aaPredicted RBP24.1■■□□□ 1.45
SDCCAG3-201ENST00000298537 OR4D11Q8NGI4 311 aa24.1■■□□□ 1.45
SDCCAG3-201ENST00000298537 GIMAP5Q96F15 307 aa24.1■■□□□ 1.45
SDCCAG3-201ENST00000298537 COL21A1Q96P44 957 aa24.1■■□□□ 1.45
SDCCAG3-201ENST00000298537 ZNF300Q96RE9 604 aaPredicted RBP24.1■■□□□ 1.45
SDCCAG3-201ENST00000298537 CYR61O00622 381 aa24.1■■□□□ 1.45
SDCCAG3-201ENST00000298537 B4GAT1O43505 415 aa24.1■■□□□ 1.45
SDCCAG3-201ENST00000298537 SEMA7AO75326 666 aa24.1■■□□□ 1.45
SDCCAG3-201ENST00000298537 OR6B1O95007 311 aa24.1■■□□□ 1.45
SDCCAG3-201ENST00000298537 BNC1Q01954 994 aa24.1■■□□□ 1.45
SDCCAG3-201ENST00000298537 TTC33Q6PID6 262 aaPredicted RBP24.1■■□□□ 1.45
SDCCAG3-201ENST00000298537 PATL1Q86TB9 770 aaKnown RBP24.1■■□□□ 1.45
SDCCAG3-201ENST00000298537 LRRC25Q8N386 305 aaPredicted RBP24.1■■□□□ 1.45
SDCCAG3-201ENST00000298537 OR4K14Q8NGD5 310 aa24.1■■□□□ 1.45
SDCCAG3-201ENST00000298537 LZICQ8WZA0 190 aa24.1■■□□□ 1.45
SDCCAG3-201ENST00000298537 NCSTNQ92542 709 aa24.1■■□□□ 1.45
SDCCAG3-201ENST00000298537 GRIP2Q9C0E4 1043 aa24.1■■□□□ 1.45
SDCCAG3-201ENST00000298537 ROGDIQ9GZN7 287 aa24.1■■□□□ 1.45
SDCCAG3-201ENST00000298537 MYRFQ9Y2G1 1151 aa24.1■■□□□ 1.45
SDCCAG3-201ENST00000298537 LYVE1Q9Y5Y7 322 aa24.1■■□□□ 1.45
SDCCAG3-201ENST00000298537 FHP07954 510 aa24.09■■□□□ 1.45
SDCCAG3-201ENST00000298537 C14orf28Q4W4Y0 310 aa24.09■■□□□ 1.45
SDCCAG3-201ENST00000298537 OGFOD3Q6PK18 319 aa24.09■■□□□ 1.45
SDCCAG3-201ENST00000298537 DNAJC22Q8N4W6 341 aa24.09■■□□□ 1.45
SDCCAG3-201ENST00000298537 APOBEC4Q8WW27 367 aaKnown RBP24.09■■□□□ 1.45
SDCCAG3-201ENST00000298537 IFT80Q9P2H3 777 aaPredicted RBP24.09■■□□□ 1.45
SDCCAG3-201ENST00000298537 PSME2Q9UL46 239 aa24.09■■□□□ 1.45
SDCCAG3-201ENST00000298537 A0A0A6YYC8 382 aaPredicted RBP24.09■■□□□ 1.45
SDCCAG3-201ENST00000298537 H0YAE9 185 aa24.09■■□□□ 1.45
SDCCAG3-201ENST00000298537 I3L1I5 382 aaPredicted RBP24.09■■□□□ 1.45
SDCCAG3-201ENST00000298537 CLPTM1O96005 669 aa24.09■■□□□ 1.45
SDCCAG3-201ENST00000298537 FESP07332 822 aa24.09■■□□□ 1.45
SDCCAG3-201ENST00000298537 GIMD1P0DJR0 217 aa24.09■■□□□ 1.45
SDCCAG3-201ENST00000298537 NR2F1P10589 423 aa24.09■■□□□ 1.45
SDCCAG3-201ENST00000298537 IGFBP5P24593 272 aa24.09■■□□□ 1.45
SDCCAG3-201ENST00000298537 CDH12P55289 794 aa24.09■■□□□ 1.45
SDCCAG3-201ENST00000298537 OR1D5P58170 312 aa24.09■■□□□ 1.45
SDCCAG3-201ENST00000298537 TRMT12Q53H54 448 aaKnown RBP24.09■■□□□ 1.45
SDCCAG3-201ENST00000298537 LACC1Q8IV20 430 aa24.09■■□□□ 1.45
SDCCAG3-201ENST00000298537 RLIMQ9NVW2 624 aa24.09■■□□□ 1.45
SDCCAG3-201ENST00000298537 P2RX2Q9UBL9 471 aa24.09■■□□□ 1.45
SDCCAG3-201ENST00000298537 ARID1BQ8NFD5 2236 aaPredicted RBP24.08■■□□□ 1.45
SDCCAG3-201ENST00000298537 OR2W5A6NFC9 320 aa24.08■■□□□ 1.45
SDCCAG3-201ENST00000298537 LILRA5A6NI73 299 aa24.08■■□□□ 1.45
SDCCAG3-201ENST00000298537 EMC8O43402 210 aa24.08■■□□□ 1.45
SDCCAG3-201ENST00000298537 HOXB6P17509 224 aaKnown RBP24.08■■□□□ 1.45
SDCCAG3-201ENST00000298537 KCNAB1Q14722 419 aa24.08■■□□□ 1.45
SDCCAG3-201ENST00000298537 ARMC8Q8IUR7 673 aa24.08■■□□□ 1.45
SDCCAG3-201ENST00000298537 METTL27Q8N6F8 245 aaPredicted RBP24.08■■□□□ 1.45
SDCCAG3-201ENST00000298537 NECAB3Q96P71 396 aaPredicted RBP24.08■■□□□ 1.45
SDCCAG3-201ENST00000298537 OR7D2Q96RA2 312 aa24.08■■□□□ 1.45
SDCCAG3-201ENST00000298537 GABARAPL1Q9H0R8 117 aa24.08■■□□□ 1.45
SDCCAG3-201ENST00000298537 LRIT1Q9P2V4 623 aa24.08■■□□□ 1.45
SDCCAG3-201ENST00000298537 SPIBQ01892 262 aa24.07■■□□□ 1.44
SDCCAG3-201ENST00000298537 KDM4DQ6B0I6 523 aa24.07■■□□□ 1.44
SDCCAG3-201ENST00000298537 ZNF655Q8N720 491 aaPredicted RBP24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms