RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 CAMKVQ8NCB2 501 aa20.12■□□□□ 0.81
SOX17-201ENST00000297316 SGCDQ92629 289 aa20.12■□□□□ 0.81
SOX17-201ENST00000297316 OTUB1Q96FW1 271 aaPredicted RBP20.12■□□□□ 0.81
SOX17-201ENST00000297316 TMEM19Q96HH6 336 aa20.12■□□□□ 0.81
SOX17-201ENST00000297316 CSF3RQ99062 836 aa20.12■□□□□ 0.81
SOX17-201ENST00000297316 SEMA6CQ9H3T2 930 aa20.12■□□□□ 0.81
SOX17-201ENST00000297316 CASC3O15234 703 aaKnown RBP20.11■□□□□ 0.81
SOX17-201ENST00000297316 PROS1P07225 676 aa20.11■□□□□ 0.81
SOX17-201ENST00000297316 TSFMP43897 325 aaKnown RBP20.11■□□□□ 0.81
SOX17-201ENST00000297316 ARFIP1P53367 373 aa20.11■□□□□ 0.81
SOX17-201ENST00000297316 GFERP55789 205 aa20.11■□□□□ 0.81
SOX17-201ENST00000297316 TGM3Q08188 693 aa20.11■□□□□ 0.81
SOX17-201ENST00000297316 CD47Q08722 323 aa20.11■□□□□ 0.81
SOX17-201ENST00000297316 SLC48A1Q6P1K1 146 aa20.11■□□□□ 0.81
SOX17-201ENST00000297316 SZRD1Q7Z422 152 aa20.11■□□□□ 0.81
SOX17-201ENST00000297316 C17orf82Q86X59 251 aaPredicted RBP20.11■□□□□ 0.81
SOX17-201ENST00000297316 PIK3C3Q8NEB9 887 aa20.11■□□□□ 0.81
SOX17-201ENST00000297316 OR5D16Q8NGK9 328 aa20.11■□□□□ 0.81
SOX17-201ENST00000297316 BBS4Q96RK4 519 aa20.11■□□□□ 0.81
SOX17-201ENST00000297316 ING2Q9H160 280 aa20.11■□□□□ 0.81
SOX17-201ENST00000297316 RIBC2Q9H4K1 309 aa20.11■□□□□ 0.81
SOX17-201ENST00000297316 RUBCNLQ9H714 662 aa20.11■□□□□ 0.81
SOX17-201ENST00000297316 A4GALTQ9NPC4 353 aa20.11■□□□□ 0.81
SOX17-201ENST00000297316 CEPT1Q9Y6K0 416 aa20.11■□□□□ 0.81
SOX17-201ENST00000297316 UNC13CQ8NB66 2214 aa20.11■□□□□ 0.81
SOX17-201ENST00000297316 WDR87Q6ZQQ6 2873 aa20.11■□□□□ 0.81
SOX17-201ENST00000297316 TFPTP0C1Z6 253 aa20.11■□□□□ 0.81
SOX17-201ENST00000297316 EPHA2P29317 976 aa20.11■□□□□ 0.81
SOX17-201ENST00000297316 CAPZBP47756 277 aa20.11■□□□□ 0.81
SOX17-201ENST00000297316 RAD23AP54725 363 aa20.11■□□□□ 0.81
SOX17-201ENST00000297316 BNC1Q01954 994 aa20.11■□□□□ 0.81
SOX17-201ENST00000297316 GPR19Q15760 415 aa20.11■□□□□ 0.81
SOX17-201ENST00000297316 DUSP7Q16829 419 aa20.11■□□□□ 0.81
SOX17-201ENST00000297316 REEP3Q6NUK4 255 aa20.11■□□□□ 0.81
SOX17-201ENST00000297316 SLC25A45Q8N413 288 aa20.11■□□□□ 0.81
SOX17-201ENST00000297316 CHDHQ8NE62 594 aaPredicted RBP20.11■□□□□ 0.81
SOX17-201ENST00000297316 DDX18Q9NVP1 670 aaKnown RBP20.11■□□□□ 0.81
SOX17-201ENST00000297316 KCMF1Q9P0J7 381 aa20.11■□□□□ 0.81
SOX17-201ENST00000297316 LYVE1Q9Y5Y7 322 aa20.11■□□□□ 0.81
SOX17-201ENST00000297316 RP1P56715 2156 aa20.11■□□□□ 0.81
SOX17-201ENST00000297316 SLC16A6O15403 523 aa20.1■□□□□ 0.81
SOX17-201ENST00000297316 DPM1O60762 260 aa20.1■□□□□ 0.81
SOX17-201ENST00000297316 GPC1P35052 558 aa20.1■□□□□ 0.81
SOX17-201ENST00000297316 CLK3P49761 638 aaKnown RBP20.1■□□□□ 0.81
SOX17-201ENST00000297316 ARHGDIAP52565 204 aa20.1■□□□□ 0.81
SOX17-201ENST00000297316 SIM2Q14190 667 aaPredicted RBP20.1■□□□□ 0.81
SOX17-201ENST00000297316 SUZ12Q15022 739 aaKnown RBP20.1■□□□□ 0.81
SOX17-201ENST00000297316 ZNF691Q5VV52 312 aa20.1■□□□□ 0.81
SOX17-201ENST00000297316 OLIG3Q7RTU3 272 aa20.1■□□□□ 0.81
SOX17-201ENST00000297316 CSNK1A1LQ8N752 337 aa20.1■□□□□ 0.81
SOX17-201ENST00000297316 C19orf47Q8N9M1 422 aaKnown RBP20.1■□□□□ 0.81
SOX17-201ENST00000297316 OR5T3Q8NGG3 340 aa20.1■□□□□ 0.81
SOX17-201ENST00000297316 EPYCQ99645 322 aa20.1■□□□□ 0.81
SOX17-201ENST00000297316 ANKRA2Q9H9E1 313 aa20.1■□□□□ 0.81
SOX17-201ENST00000297316 FSCN3Q9NQT6 498 aa20.1■□□□□ 0.81
SOX17-201ENST00000297316 TUBA8Q9NY65 449 aaPredicted RBP20.1■□□□□ 0.81
SOX17-201ENST00000297316 NINQ8N4C6 2090 aa20.1■□□□□ 0.81
SOX17-201ENST00000297316 ITGAMP11215 1152 aa20.1■□□□□ 0.81
SOX17-201ENST00000297316 DDX5P17844 614 aaKnown RBP20.1■□□□□ 0.81
SOX17-201ENST00000297316 AGXTP21549 392 aa20.1■□□□□ 0.81
SOX17-201ENST00000297316 ALDH4A1P30038 563 aa20.1■□□□□ 0.81
SOX17-201ENST00000297316 LIM2P55344 173 aa20.1■□□□□ 0.81
SOX17-201ENST00000297316 ISL1P61371 349 aa20.1■□□□□ 0.81
SOX17-201ENST00000297316 RAPSNQ13702 412 aa20.1■□□□□ 0.81
SOX17-201ENST00000297316 ELOAQ14241 798 aaKnown RBP20.1■□□□□ 0.81
SOX17-201ENST00000297316 ZC3H12BQ5HYM0 836 aaKnown RBP20.1■□□□□ 0.81
SOX17-201ENST00000297316 BORAQ6PGQ7 559 aa20.1■□□□□ 0.81
SOX17-201ENST00000297316 THAP11Q96EK4 314 aa20.1■□□□□ 0.81
SOX17-201ENST00000297316 NRBF2Q96F24 287 aa20.1■□□□□ 0.81
SOX17-201ENST00000297316 ZNF300Q96RE9 604 aaPredicted RBP20.1■□□□□ 0.81
SOX17-201ENST00000297316 SH3GLB1Q9Y371 365 aa20.1■□□□□ 0.81
SOX17-201ENST00000297316 ORC6Q9Y5N6 252 aa20.1■□□□□ 0.81
SOX17-201ENST00000297316 NCOR1O75376 2440 aa20.1■□□□□ 0.81
SOX17-201ENST00000297316 BCKDKO14874 412 aa20.09■□□□□ 0.81
SOX17-201ENST00000297316 GUCY1B2O75343 617 aa20.09■□□□□ 0.81
SOX17-201ENST00000297316 OR12D1P0DN82 309 aa20.09■□□□□ 0.81
SOX17-201ENST00000297316 ALOX12P18054 663 aa20.09■□□□□ 0.81
SOX17-201ENST00000297316 TPD52P55327 224 aaPredicted RBP20.09■□□□□ 0.81
SOX17-201ENST00000297316 RFX4Q33E94 735 aa20.09■□□□□ 0.81
SOX17-201ENST00000297316 C14orf28Q4W4Y0 310 aa20.09■□□□□ 0.81
SOX17-201ENST00000297316 FAHD1Q6P587 224 aa20.09■□□□□ 0.81
SOX17-201ENST00000297316 OGFOD3Q6PK18 319 aa20.09■□□□□ 0.81
SOX17-201ENST00000297316 OR4N5Q8IXE1 308 aa20.09■□□□□ 0.81
SOX17-201ENST00000297316 OR52J3Q8NH60 311 aa20.09■□□□□ 0.81
SOX17-201ENST00000297316 ADAMTS16Q8TE57 1224 aa20.09■□□□□ 0.81
SOX17-201ENST00000297316 OR51I1Q9H343 314 aa20.09■□□□□ 0.81
SOX17-201ENST00000297316 ZCCHC3Q9NUD5 404 aaKnown RBP20.09■□□□□ 0.81
SOX17-201ENST00000297316 LYARQ9NX58 379 aaKnown RBP20.09■□□□□ 0.81
SOX17-201ENST00000297316 AASSQ9UDR5 926 aa20.09■□□□□ 0.81
SOX17-201ENST00000297316 RNF215Q9Y6U7 377 aa20.09■□□□□ 0.81
SOX17-201ENST00000297316 NME6O75414 186 aaPredicted RBP20.09■□□□□ 0.81
SOX17-201ENST00000297316 NR2F6P10588 404 aa20.09■□□□□ 0.81
SOX17-201ENST00000297316 TDGF1P13385 188 aa20.09■□□□□ 0.81
SOX17-201ENST00000297316 PCSK6P29122 969 aa20.09■□□□□ 0.81
SOX17-201ENST00000297316 NTSP30990 170 aa20.09■□□□□ 0.81
SOX17-201ENST00000297316 HLCSP50747 726 aa20.09■□□□□ 0.81
SOX17-201ENST00000297316 SIM1P81133 766 aaPredicted RBP20.09■□□□□ 0.81
SOX17-201ENST00000297316 RELAQ04206 551 aa20.09■□□□□ 0.81
SOX17-201ENST00000297316 SYPL1Q16563 259 aa20.09■□□□□ 0.81
SOX17-201ENST00000297316 ATG16L2Q8NAA4 619 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms