RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 ZNF888P0CJ79 500 aaPredicted RBP16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 CCR7P32248 378 aa16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 MOGSQ13724 837 aa16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 SLC35F1Q5T1Q4 408 aa16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 KCTD18Q6PI47 426 aaPredicted RBP16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 UNQ6126/PRO20091Q6UXV3 157 aa16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 AKAP14Q86UN6 197 aa16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 KDM1BQ8NB78 822 aa16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 DOK4Q8TEW6 326 aa16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 TJP1Q07157 1748 aa16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 FAM155AB1AL88 458 aaPredicted RBP16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 J3QLW9 94 aa16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 HOXC11O43248 304 aaPredicted RBP16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 ZNF19P17023 458 aa16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 RCAN2Q14206 197 aa16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 IDNKQ5T6J7 187 aa16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 ZNF101Q8IZC7 436 aa16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 CDRT4Q8N9R6 151 aa16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 HAVCR1Q96D42 359 aa16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 MTHFD2LQ9H903 347 aaPredicted RBP16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 SAGE2PA6NJ88 616 aa16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 GJE1A6NN92 205 aa16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 RDH16O75452 317 aa16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 HTR1AP08908 422 aa16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 ADAM17P78536 824 aa16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 KIAA1614Q5VZ46 1190 aa16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 TLDC1Q6P9B6 456 aa16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 ZNF551Q7Z340 670 aaPredicted RBP16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 ECHDC3Q96DC8 303 aa16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 KCTD7Q96MP8 289 aa16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 PIP5K1AQ99755 562 aa16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 PISDQ9UG56 409 aa16.86■□□□□ 0.29
CDC42EP3-201ENST00000295324 CERS1P27544 350 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 ACSL1P33121 698 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 HTR6P50406 440 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 E2F2Q14209 437 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 MEDAGQ5VYS4 303 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 NEIL2Q969S2 332 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 SGTBQ96EQ0 304 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 CACNA1SQ13698 1873 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 A0A0G2JPF8 293 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 HNRNPCL3B7ZW38 293 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 HHLA1C9JL84 531 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 HNRNPCL4P0DMR1 293 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 HMGA1P17096 107 aaKnown RBP16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 AOAHP28039 575 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 TRIM61Q5EBN2 209 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 TMPRSS9Q7Z410 1059 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 GALNT10Q86SR1 603 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 BORCS5Q969J3 196 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 MND1Q9BWT6 205 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 B3GNT4Q9C0J1 378 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 GLS2Q9UI32 602 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 POU2F3Q9UKI9 436 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 CA5BQ9Y2D0 317 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 CITO14578 2027 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 C2orf92A0A1B0GVN3 265 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 CAPZA1P52907 286 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 TAS2R43P59537 309 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 PITPNAQ00169 270 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 DSG2Q14126 1118 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 COQ5Q5HYK3 327 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 GID4Q8IVV7 300 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 GPALPP1Q8IXQ4 340 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 RAB2BQ8WUD1 216 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 PTERQ96BW5 349 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 DMRT3Q9NQL9 472 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 SEC14L5O43304 696 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 RPS26P62854 115 aaKnown RBP16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 SCN1BQ07699 218 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 GINS1Q14691 196 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 CLIP4Q8N3C7 705 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 OR52N2Q8NGI0 321 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 OR14L1PQ8NHC6 308 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 ERMAPQ96PL5 475 aaPredicted RBP16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 MAP3K3Q99759 626 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 ZNF559Q9BR84 538 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 S100A6P06703 90 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 GSTT2BP0CG30 244 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 GADD45AP24522 165 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 XCR1P46094 333 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 CLCN2P51788 898 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 RPE65Q16518 533 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 SGCAQ16586 387 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 LRIT3Q3SXY7 679 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 SLC36A3Q495N2 470 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 ZNF283Q8N7M2 679 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 APIPQ96GX9 242 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 SNTG1Q9NSN8 517 aa16.85■□□□□ 0.29
CDC42EP3-201ENST00000295324 A0A1B0GVT2 93 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 SLC9A3P48764 834 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 SLC27A4Q6P1M0 643 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 TCEANCQ8N8B7 351 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 OR2T33Q8NG76 320 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 HPS1Q92902 700 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 MS4A4EQ96PG1 132 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 MKLN1Q9UL63 735 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 C17orf105B2RV13 164 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 LAMP1P11279 417 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 NR4A1P22736 598 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms