RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 PCDHGB1Q9Y5G3 927 aa13.22□□□□□ -0.29
NXF1-201ENST00000294172 TRIM64BA6NI03 449 aa13.21□□□□□ -0.29
NXF1-201ENST00000294172 C2CD4DB7Z1M9 353 aa13.21□□□□□ -0.29
NXF1-201ENST00000294172 PROM1O43490 865 aa13.21□□□□□ -0.29
NXF1-201ENST00000294172 PFDN1O60925 122 aa13.21□□□□□ -0.29
NXF1-201ENST00000294172 SEMA7AO75326 666 aa13.21□□□□□ -0.29
NXF1-201ENST00000294172 BCL10O95999 233 aa13.21□□□□□ -0.29
NXF1-201ENST00000294172 ZNF888P0CJ79 500 aaPredicted RBP13.21□□□□□ -0.29
NXF1-201ENST00000294172 F3P13726 295 aa13.21□□□□□ -0.29
NXF1-201ENST00000294172 POLR2CP19387 275 aaPredicted RBP13.21□□□□□ -0.29
NXF1-201ENST00000294172 KCNJ5P48544 419 aa13.21□□□□□ -0.29
NXF1-201ENST00000294172 KHKP50053 298 aa13.21□□□□□ -0.29
NXF1-201ENST00000294172 RPS15AP62244 130 aaKnown RBP13.21□□□□□ -0.29
NXF1-201ENST00000294172 SNRPNP63162 240 aaKnown RBP13.21□□□□□ -0.29
NXF1-201ENST00000294172 TMEM236Q5W0B7 351 aa13.21□□□□□ -0.29
NXF1-201ENST00000294172 TCTN3Q6NUS6 607 aa13.21□□□□□ -0.29
NXF1-201ENST00000294172 SLC48A1Q6P1K1 146 aa13.21□□□□□ -0.29
NXF1-201ENST00000294172 KLHL35Q6PF15 583 aa13.21□□□□□ -0.29
NXF1-201ENST00000294172 ASPGQ86U10 573 aa13.21□□□□□ -0.29
NXF1-201ENST00000294172 CCDC103Q8IW40 242 aa13.21□□□□□ -0.29
NXF1-201ENST00000294172 OR4D11Q8NGI4 311 aa13.21□□□□□ -0.29
NXF1-201ENST00000294172 ZCCHC10Q8TBK6 192 aa13.21□□□□□ -0.29
NXF1-201ENST00000294172 SLC22A18Q96BI1 424 aa13.21□□□□□ -0.29
NXF1-201ENST00000294172 HSPBAP1Q96EW2 488 aa13.21□□□□□ -0.29
NXF1-201ENST00000294172 C16orf58Q96GQ5 468 aa13.21□□□□□ -0.29
NXF1-201ENST00000294172 ZNF354BQ96LW1 612 aa13.21□□□□□ -0.29
NXF1-201ENST00000294172 CCNB1IP1Q9NPC3 277 aa13.21□□□□□ -0.29
NXF1-201ENST00000294172 IMPAD1Q9NX62 359 aa13.21□□□□□ -0.29
NXF1-201ENST00000294172 PCOLCE2Q9UKZ9 415 aa13.21□□□□□ -0.29
NXF1-201ENST00000294172 TMCC3Q9ULS5 477 aa13.21□□□□□ -0.29
NXF1-201ENST00000294172 ARHGEF17Q96PE2 2063 aaPredicted RBP13.21□□□□□ -0.3
NXF1-201ENST00000294172 OR6C74A6NCV1 312 aa13.21□□□□□ -0.3
NXF1-201ENST00000294172 BCAS1O75363 584 aaPredicted RBP13.21□□□□□ -0.3
NXF1-201ENST00000294172 NME6O75414 186 aaPredicted RBP13.21□□□□□ -0.3
NXF1-201ENST00000294172 CSNK2A2P19784 350 aaPredicted RBP13.21□□□□□ -0.3
NXF1-201ENST00000294172 CBLP22681 906 aa13.21□□□□□ -0.3
NXF1-201ENST00000294172 NUDT6P53370 316 aa13.21□□□□□ -0.3
NXF1-201ENST00000294172 RGS1Q08116 209 aa13.21□□□□□ -0.3
NXF1-201ENST00000294172 TGM3Q08188 693 aa13.21□□□□□ -0.3
NXF1-201ENST00000294172 GPR18Q14330 331 aa13.21□□□□□ -0.3
NXF1-201ENST00000294172 ZNF542PQ5EBM4 170 aa13.21□□□□□ -0.3
NXF1-201ENST00000294172 FBXO42Q6P3S6 717 aa13.21□□□□□ -0.3
NXF1-201ENST00000294172 BHLHB9Q6PI77 547 aa13.21□□□□□ -0.3
NXF1-201ENST00000294172 SLC16A12Q6ZSM3 486 aa13.21□□□□□ -0.3
NXF1-201ENST00000294172 KRT73Q86Y46 540 aa13.21□□□□□ -0.3
NXF1-201ENST00000294172 LACC1Q8IV20 430 aa13.21□□□□□ -0.3
NXF1-201ENST00000294172 SVOPQ8N4V2 548 aa13.21□□□□□ -0.3
NXF1-201ENST00000294172 DRAXINQ8NBI3 349 aaPredicted RBP13.21□□□□□ -0.3
NXF1-201ENST00000294172 OR9A2Q8NGT5 310 aa13.21□□□□□ -0.3
NXF1-201ENST00000294172 IPCEF1Q8WWN9 437 aaPredicted RBP13.21□□□□□ -0.3
NXF1-201ENST00000294172 PATE1Q8WXA2 126 aa13.21□□□□□ -0.3
NXF1-201ENST00000294172 COPS4Q9BT78 406 aa13.21□□□□□ -0.3
NXF1-201ENST00000294172 ZNF576Q9H609 170 aa13.21□□□□□ -0.3
NXF1-201ENST00000294172 GPN2Q9H9Y4 310 aaPredicted RBP13.21□□□□□ -0.3
NXF1-201ENST00000294172 GIMAP4Q9NUV9 329 aa13.21□□□□□ -0.3
NXF1-201ENST00000294172 ENPP5Q9UJA9 477 aa13.21□□□□□ -0.3
NXF1-201ENST00000294172 KCND3Q9UK17 655 aa13.21□□□□□ -0.3
NXF1-201ENST00000294172 CES1P1Q9UKY3 287 aa13.21□□□□□ -0.3
NXF1-201ENST00000294172 ZNF780BQ9Y6R6 833 aa13.21□□□□□ -0.3
NXF1-201ENST00000294172 M0R3H8 397 aa13.2□□□□□ -0.3
NXF1-201ENST00000294172 SEMA4FO95754 770 aa13.2□□□□□ -0.3
NXF1-201ENST00000294172 MPIP34949 423 aa13.2□□□□□ -0.3
NXF1-201ENST00000294172 MC3RP41968 323 aa13.2□□□□□ -0.3
NXF1-201ENST00000294172 CTSKP43235 329 aa13.2□□□□□ -0.3
NXF1-201ENST00000294172 CRISP3P54108 245 aa13.2□□□□□ -0.3
NXF1-201ENST00000294172 AQP6Q13520 282 aa13.2□□□□□ -0.3
NXF1-201ENST00000294172 SPCS2Q15005 226 aa13.2□□□□□ -0.3
NXF1-201ENST00000294172 PTGES3Q15185 160 aaKnown RBP13.2□□□□□ -0.3
NXF1-201ENST00000294172 LEXMQ3ZCV2 418 aa13.2□□□□□ -0.3
NXF1-201ENST00000294172 GPAT3Q53EU6 434 aa13.2□□□□□ -0.3
NXF1-201ENST00000294172 KLHL17Q6TDP4 642 aa13.2□□□□□ -0.3
NXF1-201ENST00000294172 PRSS48Q7RTY5 328 aa13.2□□□□□ -0.3
NXF1-201ENST00000294172 NRROSQ86YC3 692 aa13.2□□□□□ -0.3
NXF1-201ENST00000294172 CROCCP3Q8IVE0 287 aa13.2□□□□□ -0.3
NXF1-201ENST00000294172 OR13H1Q8NG92 308 aa13.2□□□□□ -0.3
NXF1-201ENST00000294172 RHOXF1Q8NHV9 184 aa13.2□□□□□ -0.3
NXF1-201ENST00000294172 RASSF5Q8WWW0 418 aa13.2□□□□□ -0.3
NXF1-201ENST00000294172 OR2A14Q96R47 310 aa13.2□□□□□ -0.3
NXF1-201ENST00000294172 ACOT13Q9NPJ3 140 aa13.2□□□□□ -0.3
NXF1-201ENST00000294172 SLC6A14Q9UN76 642 aa13.2□□□□□ -0.3
NXF1-201ENST00000294172 DUSP12Q9UNI6 340 aa13.2□□□□□ -0.3
NXF1-201ENST00000294172 GPC6Q9Y625 555 aaPredicted RBP13.2□□□□□ -0.3
NXF1-201ENST00000294172 A6NCN8 305 aa13.19□□□□□ -0.3
NXF1-201ENST00000294172 A8MVJ9 347 aa13.19□□□□□ -0.3
NXF1-201ENST00000294172 TNFRSF10CO14798 259 aa13.19□□□□□ -0.3
NXF1-201ENST00000294172 OR10H3O60404 316 aa13.19□□□□□ -0.3
NXF1-201ENST00000294172 TPST2O60704 377 aa13.19□□□□□ -0.3
NXF1-201ENST00000294172 FHP07954 510 aa13.19□□□□□ -0.3
NXF1-201ENST00000294172 SLC35G6P0C7Q6 338 aa13.19□□□□□ -0.3
NXF1-201ENST00000294172 UGT2B7P16662 529 aa13.19□□□□□ -0.3
NXF1-201ENST00000294172 C21orf33P30042 268 aaPredicted RBP13.19□□□□□ -0.3
NXF1-201ENST00000294172 TSFMP43897 325 aaKnown RBP13.19□□□□□ -0.3
NXF1-201ENST00000294172 LSM3P62310 102 aaKnown RBP13.19□□□□□ -0.3
NXF1-201ENST00000294172 ILF3Q12906 894 aaKnown RBP eCLIP13.19□□□□□ -0.3
NXF1-201ENST00000294172 SEC23BQ15437 767 aa13.19□□□□□ -0.3
NXF1-201ENST00000294172 LTB4RQ15722 352 aa13.19□□□□□ -0.3
NXF1-201ENST00000294172 DCST1Q5T197 706 aa13.19□□□□□ -0.3
NXF1-201ENST00000294172 TMEM64Q6YI46 380 aa13.19□□□□□ -0.3
NXF1-201ENST00000294172 COMTD1Q86VU5 262 aa13.19□□□□□ -0.3
NXF1-201ENST00000294172 DEPDC4Q8N2C3 294 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms