RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 LRIT1Q9P2V4 623 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 STUB1Q9UNE7 303 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 YIPF1Q9Y548 306 aa11.92□□□□□ -0.5
SLX4-201ENST00000294008 CEMIPQ8WUJ3 1361 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 NXPH3O95157 252 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 SERPINE2P07093 398 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 CDK6Q00534 326 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 DEFB134Q4QY38 66 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 GSG1LQ6UXU4 331 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 TMEM173Q86WV6 379 aaPredicted RBP11.91□□□□□ -0.5
SLX4-201ENST00000294008 MARVELD2Q8N4S9 558 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 PLEKHO2Q8TD55 490 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 OSTF1Q92882 214 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 SPTSSAQ969W0 71 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 INTS12Q96CB8 462 aaKnown RBP11.91□□□□□ -0.5
SLX4-201ENST00000294008 PBDC1Q9BVG4 233 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 ZNF160Q9HCG1 818 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 ADRB3P13945 408 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 DPP4P27487 766 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 SIRPAP78324 504 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 DEFB133Q30KQ1 61 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 CMIPQ8IY22 773 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 OR5L2Q8NGL0 311 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 IL17RBQ9NRM6 502 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 RXFP3Q9NSD7 469 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 DCAF16Q9NXF7 216 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 ITGB1BP2Q9UKP3 347 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 RAB6AP20340 208 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 MC2RQ01718 297 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 CNKSR3Q6P9H4 555 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 IL34Q6ZMJ4 242 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 ZNF517Q6ZMY9 492 aaPredicted RBP11.91□□□□□ -0.5
SLX4-201ENST00000294008 STRADAQ7RTN6 431 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 TICAM1Q8IUC6 712 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 FAM46BQ96A09 425 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 FAM122AQ96E09 287 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 CENPNQ96H22 339 aaPredicted RBP11.91□□□□□ -0.5
SLX4-201ENST00000294008 HS6ST2Q96MM7 605 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 ELF4Q99607 663 aaPredicted RBP11.91□□□□□ -0.5
SLX4-201ENST00000294008 WDR18Q9BV38 432 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 PLEKHJ1Q9NW61 149 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 TRAF3IP2O43734 574 aaPredicted RBP11.91□□□□□ -0.5
SLX4-201ENST00000294008 TFPTP0C1Z6 253 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 SLC36A3Q495N2 470 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 CMTM1Q8IZ96 169 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 TXNDC5Q8NBS9 432 aaKnown RBP11.91□□□□□ -0.5
SLX4-201ENST00000294008 NGBQ9NPG2 151 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 PLSCR3Q9NRY6 295 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 MCTS1Q9ULC4 181 aaKnown RBP11.91□□□□□ -0.5
SLX4-201ENST00000294008 M0R233 179 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 RPL7P18124 248 aaKnown RBP11.91□□□□□ -0.5
SLX4-201ENST00000294008 CRHR1P34998 444 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 GATMP50440 423 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 C3P1Q6ZMU1 363 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 BEST3Q8N1M1 668 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 TCEAL4Q96EI5 215 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 SYNPO2LQ9H987 977 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 CPS1P31327 1500 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 CDC14CA4D256 554 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 OR2J3O76001 311 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 SLURP2P0DP57 97 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 PGCP20142 388 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 XCR1P46094 333 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 AFF3P51826 1226 aaKnown RBP11.91□□□□□ -0.5
SLX4-201ENST00000294008 NKX6-1P78426 367 aaPredicted RBP11.91□□□□□ -0.5
SLX4-201ENST00000294008 MAB21L1Q13394 359 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 GBX1Q14549 363 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 TMIGD1Q6UXZ0 262 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 TMEM110Q86TL2 294 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 ZFP82Q8N141 532 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 LRRC18Q8N456 261 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 ZNF775Q96BV0 537 aaPredicted RBP11.91□□□□□ -0.5
SLX4-201ENST00000294008 SAV1Q9H4B6 383 aaPredicted RBP11.91□□□□□ -0.5
SLX4-201ENST00000294008 COQ10BQ9H8M1 238 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 SUSD2Q9UGT4 822 aa11.91□□□□□ -0.5
SLX4-201ENST00000294008 GOSR2O14653 212 aa11.9□□□□□ -0.5
SLX4-201ENST00000294008 LATO43561 262 aa11.9□□□□□ -0.5
SLX4-201ENST00000294008 CD48P09326 243 aa11.9□□□□□ -0.5
SLX4-201ENST00000294008 HLA-FP30511 346 aa11.9□□□□□ -0.5
SLX4-201ENST00000294008 PITPNBP48739 271 aa11.9□□□□□ -0.5
SLX4-201ENST00000294008 LEG1Q6P5S2 330 aa11.9□□□□□ -0.5
SLX4-201ENST00000294008 RDH10Q8IZV5 341 aa11.9□□□□□ -0.5
SLX4-201ENST00000294008 ASCC1Q8N9N2 400 aaKnown RBP11.9□□□□□ -0.5
SLX4-201ENST00000294008 SYT14Q8NB59 555 aa11.9□□□□□ -0.5
SLX4-201ENST00000294008 UBAC2Q8NBM4 344 aa11.9□□□□□ -0.5
SLX4-201ENST00000294008 LNX1Q8TBB1 728 aaPredicted RBP11.9□□□□□ -0.5
SLX4-201ENST00000294008 TMEM80Q96HE8 168 aa11.9□□□□□ -0.5
SLX4-201ENST00000294008 ACBD6Q9BR61 282 aa11.9□□□□□ -0.5
SLX4-201ENST00000294008 SMIM3Q9BZL3 60 aa11.9□□□□□ -0.5
SLX4-201ENST00000294008 ITM2CQ9NQX7 267 aa11.9□□□□□ -0.5
SLX4-201ENST00000294008 MAP3K4Q9Y6R4 1608 aa11.9□□□□□ -0.5
SLX4-201ENST00000294008 RAP2AP10114 183 aa11.9□□□□□ -0.5
SLX4-201ENST00000294008 CKMT1AP12532 417 aa11.9□□□□□ -0.5
SLX4-201ENST00000294008 SMPD1P17405 629 aa11.9□□□□□ -0.5
SLX4-201ENST00000294008 ACSM3Q53FZ2 586 aa11.9□□□□□ -0.5
SLX4-201ENST00000294008 CLEC4CQ8WTT0 213 aa11.9□□□□□ -0.5
SLX4-201ENST00000294008 RNF38Q9H0F5 515 aa11.9□□□□□ -0.5
SLX4-201ENST00000294008 ZNF286AQ9HBT8 521 aa11.9□□□□□ -0.5
SLX4-201ENST00000294008 MKLN1Q9UL63 735 aa11.9□□□□□ -0.5
SLX4-201ENST00000294008 PCDHGA1Q9Y5H4 931 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms