RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 CAPZA1P52907 286 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 ARPC4P59998 168 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 PRKCDQ05655 676 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 PKDCCQ504Y2 493 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 TCTE1Q5JU00 501 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 SLC39A11Q8N1S5 342 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 TMEM19Q96HH6 336 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 ACTR6Q9GZN1 396 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 EVA1AQ9H8M9 152 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 EXTL2Q9UBQ6 330 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 LRRTM2O43300 516 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 UGT2B10P36537 528 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 KLHDC8AQ8IYD2 350 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 SPERTQ8NA61 448 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 TMIEQ8NEW7 156 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 SUN5Q8TC36 379 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 MOCOSQ96EN8 888 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 CASD1Q96PB1 797 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 ENTPD2Q9Y5L3 495 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 E7EQ34 232 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 HCRTR2O43614 444 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 RGS9O75916 674 aaPredicted RBP12.2□□□□□ -0.46
PTCD1-201ENST00000292478 LAMP1P11279 417 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 ITGB7P26010 798 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 PCGF2P35227 344 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 CD83Q01151 205 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 PLCXD2Q0VAA5 305 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 KEAP1Q14145 624 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 ARHGAP19Q14CB8 494 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 LETMD1Q6P1Q0 360 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 ULK3Q6PHR2 472 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 MS4A15Q8N5U1 240 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 OR5L2Q8NGL0 311 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 PDLIM5Q96HC4 596 aaKnown RBP12.2□□□□□ -0.46
PTCD1-201ENST00000292478 DPH2Q9BQC3 489 aaPredicted RBP12.2□□□□□ -0.46
PTCD1-201ENST00000292478 STRADBQ9C0K7 418 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 OSMP13725 252 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 GPX3P22352 226 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 CYP27C1Q4G0S4 372 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 SERPINA11Q86U17 422 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 ZNF431Q8TF32 576 aaPredicted RBP12.2□□□□□ -0.46
PTCD1-201ENST00000292478 APIPQ96GX9 242 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 SERINC2Q96SA4 455 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 CCDC32Q9BV29 185 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 MROQ9BYG7 248 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 NUDT15Q9NV35 164 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 ALG5Q9Y673 324 aa12.2□□□□□ -0.46
PTCD1-201ENST00000292478 ZNF860A6NHJ4 632 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 INMT-MINDY4F8WBC2 141 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 SOX9P48436 509 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 CDKL1Q00532 357 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 LIPKQ5VXJ0 399 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 ACBD7Q8N6N7 88 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 CHST14Q8NCH0 376 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 SGCDQ92629 289 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 BADQ92934 168 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 CCDC115Q96NT0 180 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 IL21RQ9HBE5 538 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 PCDH10Q9P2E7 1040 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 MYH7P12883 1935 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 FEZF1A0PJY2 475 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 ZNF217O75362 1048 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 FARS2O95363 451 aaKnown RBP12.19□□□□□ -0.46
PTCD1-201ENST00000292478 ETFAP13804 333 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 FIGLAQ6QHK4 219 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 ALKAL1Q6UXT8 129 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.19□□□□□ -0.46
PTCD1-201ENST00000292478 GPAT4Q86UL3 456 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 WDR37Q9Y2I8 494 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 SLC16A8O95907 504 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 CFL1P23528 166 aaKnown RBP12.19□□□□□ -0.46
PTCD1-201ENST00000292478 ZNF84P51523 738 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 SLC7A9P82251 487 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 E2F1Q01094 437 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 MICAQ29983 383 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 LRIT3Q3SXY7 679 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 CLECL1Q8IZS7 167 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 MDGA1Q8NFP4 955 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 PHOX2BQ99453 314 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 FEVQ99581 238 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 APOBEC3BQ9UH17 382 aaKnown RBP12.19□□□□□ -0.46
PTCD1-201ENST00000292478 NPIPB15A6NHN6 443 aaPredicted RBP12.19□□□□□ -0.46
PTCD1-201ENST00000292478 EDN1P05305 212 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 ERCC1P07992 297 aaPredicted RBP12.19□□□□□ -0.46
PTCD1-201ENST00000292478 JUNDP17535 347 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 FUT4P22083 530 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 PGGT1BP53609 377 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 TRA2BP62995 288 aaKnown RBP12.19□□□□□ -0.46
PTCD1-201ENST00000292478 SELENOWP63302 87 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 TMEM236Q5W0B7 351 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 RBM12BQ8IXT5 1001 aaKnown RBP12.19□□□□□ -0.46
PTCD1-201ENST00000292478 HAVCR2Q8TDQ0 301 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 SH3YL1Q96HL8 342 aaPredicted RBP12.19□□□□□ -0.46
PTCD1-201ENST00000292478 HEBP1Q9NRV9 189 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 A0A1B0GVC2 190 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 ZNF701M0R085 212 aaPredicted RBP12.19□□□□□ -0.46
PTCD1-201ENST00000292478 NUAK1O60285 661 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 RORAP35398 523 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 AKR1D1P51857 326 aa12.19□□□□□ -0.46
PTCD1-201ENST00000292478 PSMA6P60900 246 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms