RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 PARS2Q7L3T8 475 aaKnown RBP12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 SZRD1Q7Z422 152 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 FAM26EQ8N5C1 309 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 CLDN22Q8N7P3 220 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 SYT14Q8NB59 555 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 TM4SF18Q96CE8 201 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 RNF170Q96K19 258 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 ZNF582Q96NG8 517 aaPredicted RBP12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 ZNF607Q96SK3 696 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 ZNF717Q9BY31 904 aaPredicted RBP12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 POLDIP3Q9BY77 421 aaKnown RBP12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 SERHL2Q9H4I8 314 aa12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 SIRT3Q9NTG7 399 aaPredicted RBP12.54□□□□□ -0.4
SLC28A1-201ENST00000286749 LAMA2P24043 3122 aaKnown RBP12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 A0A0B4J293 547 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 LGI1O95970 557 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 ALDH1A1P00352 501 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 C8AP07357 584 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 TRAPPC2P0DI81 140 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 TRAPPC2BP0DI82 140 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 MMP11P24347 488 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 MYL9P24844 172 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 TLE2Q04725 743 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 NFE2L1Q14494 772 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 LY6G5CQ5SRR4 150 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 ACSM5Q6NUN0 579 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 CAMKK1Q8N5S9 505 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 IL17RCQ8NAC3 791 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 UBASH3BQ8TF42 649 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 SMPDL3AQ92484 453 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 RNF31Q96EP0 1072 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 TREX2Q9BQ50 279 aaPredicted RBP12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 TOR4AQ9NXH8 423 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 AHSPQ9NZD4 102 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 TESQ9UGI8 421 aaKnown RBP12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 ACAD8Q9UKU7 415 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 TMEM98Q9Y2Y6 226 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 PRAMEF27A3QJZ7 478 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 CENPBD1B2RD01 187 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 CCL16O15467 120 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 SYN1P17600 705 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 SLC9A3P48764 834 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 METAP1P53582 386 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 SMIM11AP58511 58 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 GPAT3Q53EU6 434 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 SLC35F1Q5T1Q4 408 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 DDI2Q5TDH0 399 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 KHDRBS2Q5VWX1 349 aaKnown RBP12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 ZER1Q7Z7L7 766 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 LAPTM4BQ86VI4 370 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 IQCHQ86VS3 1027 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 MEX3DQ86XN8 651 aaKnown RBP12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 FAM129CQ86XR2 697 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 TRIM48Q8IWZ4 208 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 RDH10Q8IZV5 341 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 KRT78Q8N1N4 520 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 VWA5B2Q8N398 1253 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 GDPD1Q8N9F7 314 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 OR5D16Q8NGK9 328 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 TCEAL4Q96EI5 215 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 C1GALT1C1Q96EU7 318 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 ZFYVE19Q96K21 471 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 KCTD7Q96MP8 289 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 GDF15Q99988 308 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 MCOLN1Q9GZU1 580 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 EPHX3Q9H6B9 360 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 CTPS2Q9NRF8 586 aa12.53□□□□□ -0.4
SLC28A1-201ENST00000286749 KPNA3O00505 521 aaPredicted RBP12.52□□□□□ -0.4
SLC28A1-201ENST00000286749 POLR1CO15160 346 aaPredicted RBP12.52□□□□□ -0.4
SLC28A1-201ENST00000286749 PI15O43692 258 aa12.52□□□□□ -0.4
SLC28A1-201ENST00000286749 OR12D1P0DN82 309 aa12.52□□□□□ -0.4
SLC28A1-201ENST00000286749 MYL12AP19105 171 aa12.52□□□□□ -0.4
SLC28A1-201ENST00000286749 GPC1P35052 558 aa12.52□□□□□ -0.4
SLC28A1-201ENST00000286749 NNMTP40261 264 aa12.52□□□□□ -0.4
SLC28A1-201ENST00000286749 CAV3P56539 151 aa12.52□□□□□ -0.4
SLC28A1-201ENST00000286749 CD83Q01151 205 aa12.52□□□□□ -0.4
SLC28A1-201ENST00000286749 ALDH6A1Q02252 535 aaKnown RBP12.52□□□□□ -0.4
SLC28A1-201ENST00000286749 NOXA1Q86UR1 476 aa12.52□□□□□ -0.4
SLC28A1-201ENST00000286749 ZNF547Q8IVP9 402 aa12.52□□□□□ -0.4
SLC28A1-201ENST00000286749 SIMC1Q8NDZ2 872 aa12.52□□□□□ -0.4
SLC28A1-201ENST00000286749 OR4K5Q8NGD3 323 aa12.52□□□□□ -0.4
SLC28A1-201ENST00000286749 OR5AR1Q8NGP9 310 aa12.52□□□□□ -0.4
SLC28A1-201ENST00000286749 TM9SF4Q92544 642 aa12.52□□□□□ -0.4
SLC28A1-201ENST00000286749 DTD2Q96FN9 168 aa12.52□□□□□ -0.4
SLC28A1-201ENST00000286749 OTUB1Q96FW1 271 aaPredicted RBP12.52□□□□□ -0.4
SLC28A1-201ENST00000286749 GPA33Q99795 319 aa12.52□□□□□ -0.4
SLC28A1-201ENST00000286749 TM9SF2Q99805 663 aa12.52□□□□□ -0.4
SLC28A1-201ENST00000286749 FNDC11Q9BVV2 318 aa12.52□□□□□ -0.4
SLC28A1-201ENST00000286749 ZDHHC5Q9C0B5 715 aa12.52□□□□□ -0.4
SLC28A1-201ENST00000286749 TMEM245Q9H330 911 aa12.52□□□□□ -0.4
SLC28A1-201ENST00000286749 NEUROD4Q9HD90 331 aa12.52□□□□□ -0.4
SLC28A1-201ENST00000286749 SPHK2Q9NRA0 654 aa12.52□□□□□ -0.4
SLC28A1-201ENST00000286749 PLA2G10O15496 165 aa12.52□□□□□ -0.41
SLC28A1-201ENST00000286749 EPHX1P07099 455 aa12.52□□□□□ -0.41
SLC28A1-201ENST00000286749 BSGP35613 385 aa12.52□□□□□ -0.41
SLC28A1-201ENST00000286749 KIR2DL3P43628 341 aa12.52□□□□□ -0.41
SLC28A1-201ENST00000286749 GIPRP48546 466 aa12.52□□□□□ -0.41
SLC28A1-201ENST00000286749 CCT3P49368 545 aaKnown RBP12.52□□□□□ -0.41
SLC28A1-201ENST00000286749 WNT4P56705 351 aa12.52□□□□□ -0.41
SLC28A1-201ENST00000286749 BNC1Q01954 994 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms