RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 LRRC25Q8N386 305 aaPredicted RBP14.45□□□□□ -0.1
COPS3-201ENST00000268717 MARVELD2Q8N4S9 558 aa14.45□□□□□ -0.1
COPS3-201ENST00000268717 CBR4Q8N4T8 237 aa14.45□□□□□ -0.1
COPS3-201ENST00000268717 OR4K14Q8NGD5 310 aa14.45□□□□□ -0.1
COPS3-201ENST00000268717 ADAMTS18Q8TE60 1221 aa14.45□□□□□ -0.1
COPS3-201ENST00000268717 MAL2Q969L2 176 aa14.45□□□□□ -0.1
COPS3-201ENST00000268717 SLC35G5Q96KT7 338 aa14.45□□□□□ -0.1
COPS3-201ENST00000268717 CDC6Q99741 560 aa14.45□□□□□ -0.1
COPS3-201ENST00000268717 SLC29A1Q99808 456 aa14.45□□□□□ -0.1
COPS3-201ENST00000268717 OSBPL10Q9BXB5 764 aa14.45□□□□□ -0.1
COPS3-201ENST00000268717 ANKHQ9HCJ1 492 aa14.45□□□□□ -0.1
COPS3-201ENST00000268717 PLCL2Q9UPR0 1127 aa14.45□□□□□ -0.1
COPS3-201ENST00000268717 AP4B1Q9Y6B7 739 aa14.45□□□□□ -0.1
COPS3-201ENST00000268717 GLOD5A6NK44 160 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 SAC3D1A6NKF1 404 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 SOCS2O14508 198 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 EMC8O43402 210 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 B4GALT2O60909 372 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 GCM2O75603 506 aaPredicted RBP14.44□□□□□ -0.1
COPS3-201ENST00000268717 HPRP00739 348 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 C9P02748 559 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 ALPPL2P10696 532 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 KHKP50053 298 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 CRYBA2P53672 197 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 RAB38P57729 211 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 SNRPNP63162 240 aaKnown RBP14.44□□□□□ -0.1
COPS3-201ENST00000268717 SELENOWP63302 87 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 CYBRD1Q53TN4 286 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 PLXDC1Q8IUK5 500 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 ZDHHC21Q8IVQ6 265 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 GALNT4Q8N4A0 578 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 HORMAD2Q8N7B1 307 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 NFKBIDQ8NI38 313 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 LZICQ8WZA0 190 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 TANKQ92844 425 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 VPS50Q96JG6 964 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 HSH2DQ96JZ2 352 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 DOHHQ9BU89 302 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 C3orf14Q9HBI5 128 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 PDE7BQ9NP56 450 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 ZCCHC3Q9NUD5 404 aaKnown RBP14.44□□□□□ -0.1
COPS3-201ENST00000268717 PADI2Q9Y2J8 665 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 MRPS2Q9Y399 296 aaKnown RBP14.44□□□□□ -0.1
COPS3-201ENST00000268717 NAALAD2Q9Y3Q0 740 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 MN1Q10571 1320 aaPredicted RBP14.44□□□□□ -0.1
COPS3-201ENST00000268717 ASPMQ8IZT6 3477 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 FITM1A5D6W6 292 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 TMEM247A6NEH6 219 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 PLOD2O00469 737 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 HMGN4O00479 90 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 ASNA1O43681 348 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 PDE9AO76083 593 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 FABP3P05413 133 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 FTH1P19P0C7X4 201 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 MLLT3P42568 568 aaPredicted RBP14.44□□□□□ -0.1
COPS3-201ENST00000268717 SHC2P98077 582 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 NRF1Q16656 503 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 PRAMEF8Q5VWM4 474 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 PRAMEF7Q5VXH5 474 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 FAM92BQ6ZTR7 304 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 KMT5CQ86Y97 462 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 CCDC116Q8IYX3 515 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 CA13Q8N1Q1 262 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 TMBIM1Q969X1 311 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 AHCYL2Q96HN2 611 aaKnown RBP14.44□□□□□ -0.1
COPS3-201ENST00000268717 RDH12Q96NR8 316 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 TGM7Q96PF1 710 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 P2RX2Q9UBL9 471 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 WASF3Q9UPY6 502 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 PTPRBP23467 1997 aa14.44□□□□□ -0.1
COPS3-201ENST00000268717 C7orf72A4D263 438 aa14.43□□□□□ -0.1
COPS3-201ENST00000268717 TMEM229AB2RXF0 380 aa14.43□□□□□ -0.1
COPS3-201ENST00000268717 CYR61O00622 381 aa14.43□□□□□ -0.1
COPS3-201ENST00000268717 HCRTR1O43613 425 aa14.43□□□□□ -0.1
COPS3-201ENST00000268717 MT-ND1P03886 318 aa14.43□□□□□ -0.1
COPS3-201ENST00000268717 TFPTP0C1Z6 253 aa14.43□□□□□ -0.1
COPS3-201ENST00000268717 MSL3P1P0C860 447 aa14.43□□□□□ -0.1
COPS3-201ENST00000268717 ZNF23P17027 643 aa14.43□□□□□ -0.1
COPS3-201ENST00000268717 PPP2R1BP30154 601 aa14.43□□□□□ -0.1
COPS3-201ENST00000268717 FEN1P39748 380 aaKnown RBP14.43□□□□□ -0.1
COPS3-201ENST00000268717 GFERP55789 205 aa14.43□□□□□ -0.1
COPS3-201ENST00000268717 MRPS35P82673 323 aaKnown RBP14.43□□□□□ -0.1
COPS3-201ENST00000268717 FOXC1Q12948 553 aa14.43□□□□□ -0.1
COPS3-201ENST00000268717 SQSTM1Q13501 440 aa14.43□□□□□ -0.1
COPS3-201ENST00000268717 TP53BP2Q13625 1128 aa14.43□□□□□ -0.1
COPS3-201ENST00000268717 GNA13Q14344 377 aa14.43□□□□□ -0.1
COPS3-201ENST00000268717 NHSL2Q5HYW2 709 aa14.43□□□□□ -0.1
COPS3-201ENST00000268717 WDR74Q6RFH5 385 aaPredicted RBP14.43□□□□□ -0.1
COPS3-201ENST00000268717 PRSS42Q7Z5A4 293 aa14.43□□□□□ -0.1
COPS3-201ENST00000268717 ZDHHC13Q8IUH4 622 aa14.43□□□□□ -0.1
COPS3-201ENST00000268717 NCSTNQ92542 709 aa14.43□□□□□ -0.1
COPS3-201ENST00000268717 GATA6Q92908 595 aa14.43□□□□□ -0.1
COPS3-201ENST00000268717 SDCCAG3Q96C92 435 aa14.43□□□□□ -0.1
COPS3-201ENST00000268717 ELP4Q96EB1 424 aa14.43□□□□□ -0.1
COPS3-201ENST00000268717 CSF3RQ99062 836 aa14.43□□□□□ -0.1
COPS3-201ENST00000268717 TMEM121BQ9BXQ6 578 aaPredicted RBP14.43□□□□□ -0.1
COPS3-201ENST00000268717 TOR4AQ9NXH8 423 aa14.43□□□□□ -0.1
COPS3-201ENST00000268717 USE1Q9NZ43 259 aa14.43□□□□□ -0.1
COPS3-201ENST00000268717 PTGFRNQ9P2B2 879 aa14.43□□□□□ -0.1
COPS3-201ENST00000268717 SCN3AQ9NY46 2000 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms