RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 FGF17O60258 216 aa15.37■□□□□ 0.05
TPM1-201ENST00000267996 ATP1B1P05026 303 aa15.37■□□□□ 0.05
TPM1-201ENST00000267996 SYPP08247 313 aa15.37■□□□□ 0.05
TPM1-201ENST00000267996 RNH1P13489 461 aaKnown RBP15.37■□□□□ 0.05
TPM1-201ENST00000267996 UQCRBP14927 111 aa15.37■□□□□ 0.05
TPM1-201ENST00000267996 MATN1P21941 496 aa15.37■□□□□ 0.05
TPM1-201ENST00000267996 HSPA13P48723 471 aa15.37■□□□□ 0.05
TPM1-201ENST00000267996 SEPHS1P49903 392 aa15.37■□□□□ 0.05
TPM1-201ENST00000267996 KHKP50053 298 aa15.37■□□□□ 0.05
TPM1-201ENST00000267996 ANXA11P50995 505 aaKnown RBP15.37■□□□□ 0.05
TPM1-201ENST00000267996 SELENOWP63302 87 aa15.37■□□□□ 0.05
TPM1-201ENST00000267996 COL9A2Q14055 689 aaPredicted RBP15.37■□□□□ 0.05
TPM1-201ENST00000267996 IQCCQ4KMZ1 466 aa15.37■□□□□ 0.05
TPM1-201ENST00000267996 SWT1Q5T5J6 900 aaKnown RBP15.37■□□□□ 0.05
TPM1-201ENST00000267996 TMEM71Q6P5X7 295 aa15.37■□□□□ 0.05
TPM1-201ENST00000267996 VTCN1Q7Z7D3 282 aa15.37■□□□□ 0.05
TPM1-201ENST00000267996 PATL1Q86TB9 770 aaKnown RBP15.37■□□□□ 0.05
TPM1-201ENST00000267996 ZDHHC21Q8IVQ6 265 aa15.37■□□□□ 0.05
TPM1-201ENST00000267996 GALNT4Q8N4A0 578 aa15.37■□□□□ 0.05
TPM1-201ENST00000267996 RAB8BQ92930 207 aa15.37■□□□□ 0.05
TPM1-201ENST00000267996 GIMAP5Q96F15 307 aa15.37■□□□□ 0.05
TPM1-201ENST00000267996 DOHHQ9BU89 302 aa15.37■□□□□ 0.05
TPM1-201ENST00000267996 PTGFRNQ9P2B2 879 aa15.37■□□□□ 0.05
TPM1-201ENST00000267996 PDP2Q9P2J9 529 aa15.37■□□□□ 0.05
TPM1-201ENST00000267996 PRAMEF27A3QJZ7 478 aa15.36■□□□□ 0.05
TPM1-201ENST00000267996 BLACEA4D250 179 aa15.36■□□□□ 0.05
TPM1-201ENST00000267996 C7orf72A4D263 438 aa15.36■□□□□ 0.05
TPM1-201ENST00000267996 H0YIG0 161 aa15.36■□□□□ 0.05
TPM1-201ENST00000267996 M0QX08 132 aa15.36■□□□□ 0.05
TPM1-201ENST00000267996 LDB3O75112 727 aa15.36■□□□□ 0.05
TPM1-201ENST00000267996 SLITRK5O94991 958 aa15.36■□□□□ 0.05
TPM1-201ENST00000267996 RASAL1O95294 804 aa15.36■□□□□ 0.05
TPM1-201ENST00000267996 CST1P01037 141 aa15.36■□□□□ 0.05
TPM1-201ENST00000267996 IFNA14P01570 189 aa15.36■□□□□ 0.05
TPM1-201ENST00000267996 HMGN2P05204 90 aaKnown RBP15.36■□□□□ 0.05
TPM1-201ENST00000267996 OR12D1P0DN82 309 aa15.36■□□□□ 0.05
TPM1-201ENST00000267996 MAN2A2P49641 1150 aa15.36■□□□□ 0.05
TPM1-201ENST00000267996 ARL4DP49703 201 aa15.36■□□□□ 0.05
TPM1-201ENST00000267996 CLCN2P51788 898 aa15.36■□□□□ 0.05
TPM1-201ENST00000267996 KCNJ10P78508 379 aa15.36■□□□□ 0.05
TPM1-201ENST00000267996 ZNF628Q5EBL2 1059 aa15.36■□□□□ 0.05
TPM1-201ENST00000267996 LGI4Q8N135 537 aa15.36■□□□□ 0.05
TPM1-201ENST00000267996 OR2L13Q8N349 312 aa15.36■□□□□ 0.05
TPM1-201ENST00000267996 CBR4Q8N4T8 237 aa15.36■□□□□ 0.05
TPM1-201ENST00000267996 EID2Q8N6I1 236 aa15.36■□□□□ 0.05
TPM1-201ENST00000267996 NUP43Q8NFH3 380 aa15.36■□□□□ 0.05
TPM1-201ENST00000267996 OR7G2Q8NG99 324 aa15.36■□□□□ 0.05
TPM1-201ENST00000267996 OR2I1PQ8NGU4 316 aa15.36■□□□□ 0.05
TPM1-201ENST00000267996 N4BP2L2Q92802 583 aaPredicted RBP15.36■□□□□ 0.05
TPM1-201ENST00000267996 KAT2AQ92830 837 aa15.36■□□□□ 0.05
TPM1-201ENST00000267996 NAT6Q93015 286 aa15.36■□□□□ 0.05
TPM1-201ENST00000267996 TMEM19Q96HH6 336 aa15.36■□□□□ 0.05
TPM1-201ENST00000267996 MAGED4Q96JG8 741 aa15.36■□□□□ 0.05
TPM1-201ENST00000267996 C7orf34Q96L11 122 aa15.36■□□□□ 0.05
TPM1-201ENST00000267996 RAB26Q9ULW5 256 aa15.36■□□□□ 0.05
TPM1-201ENST00000267996 AK5Q9Y6K8 562 aa15.36■□□□□ 0.05
TPM1-201ENST00000267996 A0A087WV62 115 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 CPED1A4D0V7 1026 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 PDLIM1O00151 329 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 PGM3O95394 542 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 AVPR1BP47901 424 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 PRKAG1P54619 331 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 ID2Q02363 134 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 LASP1Q14847 261 aaKnown RBP15.35■□□□□ 0.05
TPM1-201ENST00000267996 NRF1Q16656 503 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 FAM214AQ32MH5 1076 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 PROX2Q3B8N5 592 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 SNAP47Q5SQN1 464 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 FHL5Q5TD97 284 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 ZNF574Q6ZN55 896 aaPredicted RBP15.35■□□□□ 0.05
TPM1-201ENST00000267996 MED25Q71SY5 747 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 SZRD1Q7Z422 152 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 ZNF675Q8TD23 568 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 TMBIM1Q969X1 311 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 LOXL4Q96JB6 756 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 VPS50Q96JG6 964 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 P2RX2Q9UBL9 471 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 CLCA2Q9UQC9 943 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 SCN2AQ99250 2005 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 A0A1W2PQM1 296 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 TMEM150CB9EJG8 249 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 DENRO43583 198 aaKnown RBP15.35■□□□□ 0.05
TPM1-201ENST00000267996 ASNA1O43681 348 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 PLOD3O60568 738 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 DPM1O60762 260 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 OR2B3O76000 313 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 CPNE6O95741 557 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 BCHEP06276 602 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 RPSAP08865 295 aaKnown RBP15.35■□□□□ 0.05
TPM1-201ENST00000267996 ANKRD34CP0C6C1 535 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 SLC35E2P0CK97 266 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 FOLR1P15328 257 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 PPP2R1BP30154 601 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 CCL7P80098 99 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 IGLV3-21P80748 117 aaPredicted RBP15.35■□□□□ 0.05
TPM1-201ENST00000267996 VLDLRP98155 873 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 MGAT2Q10469 447 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 TMPRSS9Q7Z410 1059 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 ZNF595Q8IYB9 648 aa15.35■□□□□ 0.05
TPM1-201ENST00000267996 OR5D16Q8NGK9 328 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms