RNA–Protein interactions for RNA: ENST00000266743.6

SYCP3-201, Transcript of synaptonemal complex protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP3, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-201ENST00000266743 CCDC68Q9H2F9 335 aa8.9□□□□□ -0.98
SYCP3-201ENST00000266743 INTS10Q9NVR2 710 aaKnown RBP8.9□□□□□ -0.98
SYCP3-201ENST00000266743 KLHL42Q9P2K6 505 aa8.9□□□□□ -0.98
SYCP3-201ENST00000266743 IKZF3Q9UKT9 509 aa8.9□□□□□ -0.98
SYCP3-201ENST00000266743 DAPP1Q9UN19 280 aa8.9□□□□□ -0.98
SYCP3-201ENST00000266743 SOX13Q9UN79 622 aa8.9□□□□□ -0.98
SYCP3-201ENST00000266743 MAPRE3Q9UPY8 281 aa8.9□□□□□ -0.98
SYCP3-201ENST00000266743 MRPS33Q9Y291 106 aaKnown RBP8.9□□□□□ -0.98
SYCP3-201ENST00000266743 DOCK7Q96N67 2140 aa8.9□□□□□ -0.99
SYCP3-201ENST00000266743 RAI1Q7Z5J4 1906 aaPredicted RBP8.9□□□□□ -0.99
SYCP3-201ENST00000266743 IGHV4-30-2A0A087WSY4 118 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 WASHC1A8K0Z3 465 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 C16orf97H3BN30 126 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 RTCAO00442 366 aaKnown RBP8.89□□□□□ -0.99
SYCP3-201ENST00000266743 PLOD2O00469 737 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 FGF17O60258 216 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 SH3BGRLO75368 114 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 PRKRAO75569 313 aaKnown RBP8.89□□□□□ -0.99
SYCP3-201ENST00000266743 C8GP07360 202 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 DPP4P27487 766 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 SERPINB3P29508 390 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 STIP1P31948 543 aaKnown RBP8.89□□□□□ -0.99
SYCP3-201ENST00000266743 IDUAP35475 653 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 SLC1A2P43004 574 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 NPY2RP49146 381 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 STXBP1P61764 594 aaKnown RBP8.89□□□□□ -0.99
SYCP3-201ENST00000266743 RPS4XP62701 263 aaKnown RBP8.89□□□□□ -0.99
SYCP3-201ENST00000266743 TPM4P67936 248 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 BASP1P80723 227 aaKnown RBP8.89□□□□□ -0.99
SYCP3-201ENST00000266743 FAPQ12884 760 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 EXOC3L2Q2M3D2 409 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 C18orf21Q32NC0 220 aaPredicted RBP8.89□□□□□ -0.99
SYCP3-201ENST00000266743 SH2D5Q6ZV89 423 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 VN1R5Q7Z5H4 357 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 THOC6Q86W42 341 aaKnown RBP8.89□□□□□ -0.99
SYCP3-201ENST00000266743 GRAMD2AQ8IUY3 354 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 TRIM42Q8IWZ5 723 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 PALM2Q8IXS6 379 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 ZNF611Q8N823 705 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 ZNF610Q8N9Z0 462 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 RAB3IL1Q8TBN0 382 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 SPPL2AQ8TCT8 520 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 NEUROG1Q92886 237 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 LINGO1Q96FE5 620 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 PLPPR2Q96GM1 343 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 C1orf159Q96HA4 380 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 ART5Q96L15 291 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 PELI2Q9HAT8 420 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 SERHLQ9NQF3 203 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 TRMT6Q9UJA5 497 aaKnown RBP8.89□□□□□ -0.99
SYCP3-201ENST00000266743 SLC22A14Q9Y267 594 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 NINQ8N4C6 2090 aa8.89□□□□□ -0.99
SYCP3-201ENST00000266743 GRID2IPA4D2P6 1211 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 LRRC14BA6NHZ5 514 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 OVOL3O00110 214 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 FTCDO95954 541 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 FREM3P0C091 2139 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 HIST1H2AGP0C0S8 130 aaPredicted RBP8.88□□□□□ -0.99
SYCP3-201ENST00000266743 CPN1P15169 458 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 HIST1H2ADP20671 130 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 CFPP27918 469 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 PTPN6P29350 595 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 KIR2DL2P43627 348 aaPredicted RBP8.88□□□□□ -0.99
SYCP3-201ENST00000266743 CDKN2DP55273 166 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 HERVK_113P63132 956 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 ERVK-8P63133 956 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 GPS1Q13098 491 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 THOC5Q13769 683 aaKnown RBP8.88□□□□□ -0.99
SYCP3-201ENST00000266743 ZNF267Q14586 743 aaPredicted RBP8.88□□□□□ -0.99
SYCP3-201ENST00000266743 EFTUD2Q15029 972 aaKnown RBP eCLIP8.88□□□□□ -0.99
SYCP3-201ENST00000266743 KBTBD12Q3ZCT8 623 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 RBM20Q5T481 1227 aaKnown RBP8.88□□□□□ -0.99
SYCP3-201ENST00000266743 CASC4Q6P4E1 433 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 ABHD17CQ6PCB6 329 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 ANGPTL8Q6UXH0 198 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 ZNF793Q6ZN11 406 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 WFDC8Q8IUA0 241 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 MYO1HQ8N1T3 1032 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 SLC15A4Q8N697 577 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 CCDC89Q8N998 374 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 LILRB1Q8NHL6 650 aaPredicted RBP8.88□□□□□ -0.99
SYCP3-201ENST00000266743 ZNF669Q96BR6 464 aaPredicted RBP8.88□□□□□ -0.99
SYCP3-201ENST00000266743 FBXL8Q96CD0 374 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 HIST1H2AHQ96KK5 128 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 ZFP3Q96NJ6 502 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 F2RL3Q96RI0 385 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 SERINC2Q96SA4 455 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 HIST1H2AJQ99878 128 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 H2AFJQ9BTM1 129 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 ERVK-6Q9BXR3 956 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 REXO4Q9GZR2 422 aaKnown RBP8.88□□□□□ -0.99
SYCP3-201ENST00000266743 WWTR1Q9GZV5 400 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 PAK5Q9P286 719 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 ERVK-19Q9WJR5 959 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 LIPT1Q9Y234 373 aa8.88□□□□□ -0.99
SYCP3-201ENST00000266743 MAGED1Q9Y5V3 778 aaPredicted RBP8.88□□□□□ -0.99
SYCP3-201ENST00000266743 A0A096LNT2 108 aa8.87□□□□□ -0.99
SYCP3-201ENST00000266743 ANKRD33BA6NCL7 494 aa8.87□□□□□ -0.99
SYCP3-201ENST00000266743 ACTL6AO96019 429 aa8.87□□□□□ -0.99
SYCP3-201ENST00000266743 CLPSP04118 112 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms