RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 MARVELD2Q8N4S9 558 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 OR56A3Q8NH54 315 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 CNIH3Q8TBE1 160 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 HSPA12BQ96MM6 686 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 FEVQ99581 238 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 KCNK13Q9HB14 408 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 SEC14L4Q9UDX3 406 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 NME7Q9Y5B8 376 aa14.68□□□□□ -0.06
TIMP3-201ENST00000266085 FAM155AB1AL88 458 aaPredicted RBP14.67□□□□□ -0.06
TIMP3-201ENST00000266085 TP53I11O14683 189 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 MT-ND5P03915 603 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 GCGRP47871 477 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 STARP49675 285 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 CCINQ13939 588 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 IL22RA1Q8N6P7 574 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 OR52E1Q8NGJ3 308 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 MAL2Q969L2 176 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 KIAA1143Q96AT1 154 aaPredicted RBP14.67□□□□□ -0.06
TIMP3-201ENST00000266085 UBXN10Q96LJ8 280 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 POLDIP3Q9BY77 421 aaKnown RBP14.67□□□□□ -0.06
TIMP3-201ENST00000266085 PRSS16Q9NQE7 514 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 CA5BQ9Y2D0 317 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 SMCHD1A6NHR9 2005 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 LAMB1P07942 1786 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 PSMD9O00233 223 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 MAOBP27338 520 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 ZXDBP98169 803 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 PLCXD2Q0VAA5 305 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 DEFB133Q30KQ1 61 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 ZNF404Q494X3 552 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 GALNTL5Q7Z4T8 443 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 TMEM125Q96AQ2 219 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 ARRDC3Q96B67 414 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 CMKLR1Q99788 373 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 PAPPAQ13219 1627 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 AREL1O15033 823 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 SCO2O43819 266 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 PPM1BO75688 479 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 GSTT2BP0CG30 244 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 MAGEA3P43357 314 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 SPRED3Q2MJR0 410 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 GID4Q8IVV7 300 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 BCL7CQ8WUZ0 217 aaPredicted RBP14.67□□□□□ -0.06
TIMP3-201ENST00000266085 METTL2AQ96IZ6 378 aaKnown RBP14.67□□□□□ -0.06
TIMP3-201ENST00000266085 PREBQ9HCU5 417 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 IFT46Q9NQC8 304 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 ACTR10Q9NZ32 417 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 EXOSC1Q9Y3B2 195 aaKnown RBP14.67□□□□□ -0.06
TIMP3-201ENST00000266085 CDRT1O95170 752 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 CXCL10P02778 98 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 RETP07949 1114 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 GPX3P22352 226 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 CRISP1P54107 249 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 TAS2R43P59537 309 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 NSDHLQ15738 373 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 OGFRL1Q5TC84 451 aaPredicted RBP14.67□□□□□ -0.06
TIMP3-201ENST00000266085 DTWD1Q8N5C7 304 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 ADAMTS18Q8TE60 1221 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 HLA-CQ95604 372 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 SP140LQ9H930 580 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 UBAP1Q9NZ09 502 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 VAPAQ9P0L0 249 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 CDK5RAP2Q96SN8 1893 aa14.67□□□□□ -0.06
TIMP3-201ENST00000266085 CELP19835 753 aa14.66□□□□□ -0.06
TIMP3-201ENST00000266085 RAB15P59190 212 aa14.66□□□□□ -0.06
TIMP3-201ENST00000266085 OR2L5Q8NG80 312 aa14.66□□□□□ -0.06
TIMP3-201ENST00000266085 ZNF420Q8TAQ5 688 aaPredicted RBP14.66□□□□□ -0.06
TIMP3-201ENST00000266085 C3orf30Q96M34 536 aa14.66□□□□□ -0.06
TIMP3-201ENST00000266085 MACROD1Q9BQ69 325 aa14.66□□□□□ -0.06
TIMP3-201ENST00000266085 ACPTQ9BZG2 426 aa14.66□□□□□ -0.06
TIMP3-201ENST00000266085 LIN28AQ9H9Z2 209 aaKnown RBP14.66□□□□□ -0.06
TIMP3-201ENST00000266085 GNG8Q9UK08 70 aa14.66□□□□□ -0.06
TIMP3-201ENST00000266085 SARDHQ9UL12 918 aa14.66□□□□□ -0.06
TIMP3-201ENST00000266085 ZFR2Q9UPR6 939 aaKnown RBP14.66□□□□□ -0.06
TIMP3-201ENST00000266085 NUP205Q92621 2012 aa14.66□□□□□ -0.06
TIMP3-201ENST00000266085 A0A1W2PRG6 482 aa14.66□□□□□ -0.06
TIMP3-201ENST00000266085 GRXCR2A6NFK2 248 aa14.66□□□□□ -0.06
TIMP3-201ENST00000266085 SLC2A2P11168 524 aaPredicted RBP14.66□□□□□ -0.06
TIMP3-201ENST00000266085 DMPKQ09013 629 aa14.66□□□□□ -0.06
TIMP3-201ENST00000266085 RPL13AP3Q6NVV1 102 aa14.66□□□□□ -0.06
TIMP3-201ENST00000266085 NAGSQ8N159 534 aa14.66□□□□□ -0.06
TIMP3-201ENST00000266085 PNLDC1Q8NA58 520 aaKnown RBP14.66□□□□□ -0.06
TIMP3-201ENST00000266085 ERMAPQ96PL5 475 aaPredicted RBP14.66□□□□□ -0.06
TIMP3-201ENST00000266085 INPP5KQ9BT40 448 aa14.66□□□□□ -0.06
TIMP3-201ENST00000266085 DMRT3Q9NQL9 472 aa14.66□□□□□ -0.06
TIMP3-201ENST00000266085 MAU2Q9Y6X3 613 aa14.66□□□□□ -0.06
TIMP3-201ENST00000266085 C2orf92A0A1B0GVN3 265 aa14.66□□□□□ -0.06
TIMP3-201ENST00000266085 RBMXL2O75526 392 aaKnown RBP14.66□□□□□ -0.06
TIMP3-201ENST00000266085 CTGFP29279 349 aa14.66□□□□□ -0.06
TIMP3-201ENST00000266085 TNFRSF4P43489 277 aa14.66□□□□□ -0.06
TIMP3-201ENST00000266085 CAMK1Q14012 370 aa14.66□□□□□ -0.06
TIMP3-201ENST00000266085 RGNQ15493 299 aa14.66□□□□□ -0.06
TIMP3-201ENST00000266085 PDSS1Q5T2R2 415 aa14.66□□□□□ -0.06
TIMP3-201ENST00000266085 CGB2Q6NT52 195 aa14.66□□□□□ -0.06
TIMP3-201ENST00000266085 TUBA3EQ6PEY2 450 aa14.66□□□□□ -0.06
TIMP3-201ENST00000266085 OR6C2Q9NZP2 312 aa14.66□□□□□ -0.06
TIMP3-201ENST00000266085 UPB1Q9UBR1 384 aa14.66□□□□□ -0.06
TIMP3-201ENST00000266085 CCRL2O00421 344 aa14.65□□□□□ -0.06
TIMP3-201ENST00000266085 RNF13O43567 381 aa14.65□□□□□ -0.06
TIMP3-201ENST00000266085 BMP2P12643 396 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms