RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 MAT2BQ9NZL9 334 aa13.32□□□□□ -0.28
SSBP1-201ENST00000265304 SPTA1P02549 2419 aa13.32□□□□□ -0.28
SSBP1-201ENST00000265304 PEX12O00623 359 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 PDPK1O15530 556 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 CCDC22O60826 627 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 ERAL1O75616 437 aaKnown RBP13.31□□□□□ -0.28
SSBP1-201ENST00000265304 CEACAM4O75871 244 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 PSMG1O95456 288 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 PGRP06401 933 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 COX7A2P14406 83 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 OTX2P32243 289 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 FEN1P39748 380 aaKnown RBP13.31□□□□□ -0.28
SSBP1-201ENST00000265304 KIR3DL1P43629 444 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 POLR2JP52435 117 aaKnown RBP13.31□□□□□ -0.28
SSBP1-201ENST00000265304 SLC26A5P58743 744 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 ID2Q02363 134 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 CHAF1BQ13112 559 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 ATP1A4Q13733 1029 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 ZNF750Q32MQ0 723 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 SPANXN4Q5MJ08 99 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 MFSD4BQ5TF39 518 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 ANXA8L1Q5VT79 327 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 PAPD4Q6PIY7 484 aaKnown RBP13.31□□□□□ -0.28
SSBP1-201ENST00000265304 PAOXQ6QHF9 649 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 CCDC116Q8IYX3 515 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 OR1N1Q8NGS0 311 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 ZNF721Q8TF20 911 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 HOXB13Q92826 284 aaPredicted RBP13.31□□□□□ -0.28
SSBP1-201ENST00000265304 RIT1Q92963 219 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 EXOSC8Q96B26 276 aaKnown RBP13.31□□□□□ -0.28
SSBP1-201ENST00000265304 C8orf44Q96CB5 159 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 SENP5Q96HI0 755 aaPredicted RBP13.31□□□□□ -0.28
SSBP1-201ENST00000265304 CCDC115Q96NT0 180 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 SERHLQ9NQF3 203 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 SH3BP4Q9P0V3 963 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 BTNL2Q9UIR0 455 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 FBXL4Q9UKA2 621 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 ENTPD4Q9Y227 616 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 ARL2BPQ9Y2Y0 163 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 GMEB1Q9Y692 573 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 CLCA3PQ9Y6N3 262 aa13.31□□□□□ -0.28
SSBP1-201ENST00000265304 KMT2BQ9UMN6 2715 aaPredicted RBP13.3□□□□□ -0.28
SSBP1-201ENST00000265304 NSG1A0A0A6YYJ2 146 aa13.3□□□□□ -0.28
SSBP1-201ENST00000265304 CDK2AP1O14519 115 aa13.3□□□□□ -0.28
SSBP1-201ENST00000265304 CLPSP04118 112 aa13.3□□□□□ -0.28
SSBP1-201ENST00000265304 SERPINA7P05543 415 aa13.3□□□□□ -0.28
SSBP1-201ENST00000265304 RRADP55042 308 aa13.3□□□□□ -0.28
SSBP1-201ENST00000265304 STX1BP61266 288 aa13.3□□□□□ -0.28
SSBP1-201ENST00000265304 AP2B1P63010 937 aa13.3□□□□□ -0.28
SSBP1-201ENST00000265304 Q0VFX4 171 aa13.3□□□□□ -0.28
SSBP1-201ENST00000265304 AIMP2Q13155 320 aaKnown RBP13.3□□□□□ -0.28
SSBP1-201ENST00000265304 TLR1Q15399 786 aa13.3□□□□□ -0.28
SSBP1-201ENST00000265304 FAM174BQ3ZCQ3 159 aa13.3□□□□□ -0.28
SSBP1-201ENST00000265304 EXOSC6Q5RKV6 272 aaKnown RBP13.3□□□□□ -0.28
SSBP1-201ENST00000265304 ANKRD26P1Q6NSI1 321 aa13.3□□□□□ -0.28
SSBP1-201ENST00000265304 JMJD6Q6NYC1 403 aaPredicted RBP13.3□□□□□ -0.28
SSBP1-201ENST00000265304 ZNF615Q8N8J6 731 aa13.3□□□□□ -0.28
SSBP1-201ENST00000265304 OR7G1Q8NGA0 311 aa13.3□□□□□ -0.28
SSBP1-201ENST00000265304 OR9I1Q8NGQ6 314 aa13.3□□□□□ -0.28
SSBP1-201ENST00000265304 PSMF1Q92530 271 aa13.3□□□□□ -0.28
SSBP1-201ENST00000265304 PPWD1Q96BP3 646 aaKnown RBP13.3□□□□□ -0.28
SSBP1-201ENST00000265304 ELP4Q96EB1 424 aa13.3□□□□□ -0.28
SSBP1-201ENST00000265304 ART5Q96L15 291 aa13.3□□□□□ -0.28
SSBP1-201ENST00000265304 MARK4Q96L34 752 aa13.3□□□□□ -0.28
SSBP1-201ENST00000265304 PHF12Q96QT6 1004 aa13.3□□□□□ -0.28
SSBP1-201ENST00000265304 BBS4Q96RK4 519 aa13.3□□□□□ -0.28
SSBP1-201ENST00000265304 PRORYQ9H606 182 aa13.3□□□□□ -0.28
SSBP1-201ENST00000265304 ATP13A2Q9NQ11 1180 aa13.3□□□□□ -0.28
SSBP1-201ENST00000265304 SIRT3Q9NTG7 399 aaPredicted RBP13.3□□□□□ -0.28
SSBP1-201ENST00000265304 PTGFRNQ9P2B2 879 aa13.3□□□□□ -0.28
SSBP1-201ENST00000265304 MAN2B2Q9Y2E5 1009 aa13.3□□□□□ -0.28
SSBP1-201ENST00000265304 KCNMB2Q9Y691 235 aa13.3□□□□□ -0.28
SSBP1-201ENST00000265304 TNRC6AQ8NDV7 1962 aaKnown RBP13.3□□□□□ -0.28
SSBP1-201ENST00000265304 EXPH5Q8NEV8 1989 aa13.3□□□□□ -0.28
SSBP1-201ENST00000265304 ATRXP46100 2492 aa13.29□□□□□ -0.28
SSBP1-201ENST00000265304 IGHV3-20A0A0C4DH32 117 aa13.29□□□□□ -0.28
SSBP1-201ENST00000265304 A0A1W2PP18 115 aa13.29□□□□□ -0.28
SSBP1-201ENST00000265304 A0A1W2PRB8 838 aa13.29□□□□□ -0.28
SSBP1-201ENST00000265304 CDC14CA4D256 554 aa13.29□□□□□ -0.28
SSBP1-201ENST00000265304 OR6C76A6NM76 312 aa13.29□□□□□ -0.28
SSBP1-201ENST00000265304 C17orf105B2RV13 164 aa13.29□□□□□ -0.28
SSBP1-201ENST00000265304 BCAS2O75934 225 aaPredicted RBP13.29□□□□□ -0.28
SSBP1-201ENST00000265304 ITGB2P05107 769 aa13.29□□□□□ -0.28
SSBP1-201ENST00000265304 CT62P0C5K7 136 aa13.29□□□□□ -0.28
SSBP1-201ENST00000265304 ZCCHC18P0CG32 403 aa13.29□□□□□ -0.28
SSBP1-201ENST00000265304 NCF2P19878 526 aaPredicted RBP13.29□□□□□ -0.28
SSBP1-201ENST00000265304 PTPN6P29350 595 aa13.29□□□□□ -0.28
SSBP1-201ENST00000265304 NTSP30990 170 aa13.29□□□□□ -0.28
SSBP1-201ENST00000265304 S100A3P33764 101 aa13.29□□□□□ -0.28
SSBP1-201ENST00000265304 MAP3K8P41279 467 aa13.29□□□□□ -0.28
SSBP1-201ENST00000265304 SLC37A1P57057 533 aa13.29□□□□□ -0.28
SSBP1-201ENST00000265304 KLF10Q13118 480 aa13.29□□□□□ -0.28
SSBP1-201ENST00000265304 ATP1A1-AS1Q5TC04 95 aa13.29□□□□□ -0.28
SSBP1-201ENST00000265304 GKAP1Q5VSY0 366 aaPredicted RBP13.29□□□□□ -0.28
SSBP1-201ENST00000265304 FAAH2Q6GMR7 532 aa13.29□□□□□ -0.28
SSBP1-201ENST00000265304 OR4F3Q6IEY1 312 aa13.29□□□□□ -0.28
SSBP1-201ENST00000265304 TMEM64Q6YI46 380 aa13.29□□□□□ -0.28
SSBP1-201ENST00000265304 GALNT12Q8IXK2 581 aa13.29□□□□□ -0.28
SSBP1-201ENST00000265304 LGI4Q8N135 537 aa13.29□□□□□ -0.28
SSBP1-201ENST00000265304 OR2L13Q8N349 312 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms