RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 SECISBP2Q96T21 854 aaKnown RBP12.48□□□□□ -0.41
NUP54-201ENST00000264883 SYNDIG1Q9H7V2 258 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 SLC39A1Q9NY26 324 aa12.48□□□□□ -0.41
NUP54-201ENST00000264883 PPIEQ9UNP9 301 aaKnown RBP12.48□□□□□ -0.41
NUP54-201ENST00000264883 EXO1Q9UQ84 846 aaKnown RBP12.48□□□□□ -0.41
NUP54-201ENST00000264883 YARS2Q9Y2Z4 477 aaKnown RBP12.48□□□□□ -0.41
NUP54-201ENST00000264883 SPIN1Q9Y657 262 aaPredicted RBP12.48□□□□□ -0.41
NUP54-201ENST00000264883 TMEM229AB2RXF0 380 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 TLR4O00206 839 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 CASKO14936 926 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 MMP20O60882 483 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 CPSF4O95639 269 aaKnown RBP12.47□□□□□ -0.41
NUP54-201ENST00000264883 SDC1P18827 310 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 HLA-FP30511 346 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 GDF5P43026 501 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 BDKRB1P46663 353 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 OR1E2P47887 323 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 C21orf58P58505 322 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 DCDC1P59894 354 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 DSC1Q08554 894 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 CRTC2Q53ET0 693 aaPredicted RBP12.47□□□□□ -0.41
NUP54-201ENST00000264883 GPRC6AQ5T6X5 926 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 FBXO46Q6PJ61 603 aaPredicted RBP12.47□□□□□ -0.41
NUP54-201ENST00000264883 ASB18Q6ZVZ8 466 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 SERPINA9Q86WD7 417 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 PM20D2Q8IYS1 436 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 CFAP52Q8N1V2 620 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 CLRN3Q8NCR9 226 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 OR4A15Q8NGL6 344 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 FCRL1Q96LA6 429 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 CWH43Q9H720 699 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 C11orf16Q9NQ32 467 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 TRPM5Q9NZQ8 1165 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 ASB4Q9Y574 426 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 ALPK3Q96L96 1907 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 TRBV5-4A0A0C4DH59 114 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 A0A1B0GVI7 797 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 PIPSLA2A3N6 862 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 SLC30A4O14863 429 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 SLC25A14O95258 325 aaPredicted RBP12.47□□□□□ -0.41
NUP54-201ENST00000264883 PDYNP01213 254 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 CCL5P13501 91 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 SELPP16109 830 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 SLC6A4P31645 630 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 DGKEP52429 567 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 SMSP52788 366 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 RPS25P62851 125 aaKnown RBP12.47□□□□□ -0.41
NUP54-201ENST00000264883 SELENOWP63302 87 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 TEAD4Q15561 434 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 PLK5Q496M5 336 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 C3orf38Q5JPI3 329 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 NHLRC3Q5JS37 347 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 GLB1LQ6UWU2 654 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 SLC24A5Q71RS6 500 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 KANSL1Q7Z3B3 1105 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 PLA2G15Q8NCC3 412 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 AHCYL2Q96HN2 611 aaKnown RBP12.47□□□□□ -0.41
NUP54-201ENST00000264883 ERMAPQ96PL5 475 aaPredicted RBP12.47□□□□□ -0.41
NUP54-201ENST00000264883 OR2M2Q96R28 347 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 ATF6BQ99941 703 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 BRD7Q9NPI1 651 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 NUDT15Q9NV35 164 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 HCN2Q9UL51 889 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 GSTK1Q9Y2Q3 226 aa12.47□□□□□ -0.41
NUP54-201ENST00000264883 RPL36Q9Y3U8 105 aaKnown RBP12.47□□□□□ -0.41
NUP54-201ENST00000264883 FAM25EA8MYX2 175 aa12.46□□□□□ -0.41
NUP54-201ENST00000264883 LGALS8O00214 317 aa12.46□□□□□ -0.41
NUP54-201ENST00000264883 SGTAO43765 313 aa12.46□□□□□ -0.41
NUP54-201ENST00000264883 SH3BP5O60239 455 aa12.46□□□□□ -0.41
NUP54-201ENST00000264883 ADAM11O75078 769 aa12.46□□□□□ -0.41
NUP54-201ENST00000264883 EOMESO95936 686 aa12.46□□□□□ -0.41
NUP54-201ENST00000264883 SYPP08247 313 aa12.46□□□□□ -0.41
NUP54-201ENST00000264883 BPIP17213 487 aa12.46□□□□□ -0.41
NUP54-201ENST00000264883 VSX2P58304 361 aaPredicted RBP12.46□□□□□ -0.41
NUP54-201ENST00000264883 RBBP4Q09028 425 aa12.46□□□□□ -0.41
NUP54-201ENST00000264883 LRRC74AQ0VAA2 488 aa12.46□□□□□ -0.41
NUP54-201ENST00000264883 ETFDHQ16134 617 aa12.46□□□□□ -0.41
NUP54-201ENST00000264883 UGT8Q16880 541 aa12.46□□□□□ -0.41
NUP54-201ENST00000264883 GPR33Q49SQ1 333 aa12.46□□□□□ -0.41
NUP54-201ENST00000264883 RNLSQ5VYX0 342 aa12.46□□□□□ -0.41
NUP54-201ENST00000264883 LAPTM4BQ86VI4 370 aa12.46□□□□□ -0.41
NUP54-201ENST00000264883 PIAS4Q8N2W9 510 aaPredicted RBP12.46□□□□□ -0.41
NUP54-201ENST00000264883 L3MBTL4Q8NA19 623 aa12.46□□□□□ -0.41
NUP54-201ENST00000264883 AQP11Q8NBQ7 271 aa12.46□□□□□ -0.41
NUP54-201ENST00000264883 MAL2Q969L2 176 aa12.46□□□□□ -0.41
NUP54-201ENST00000264883 PLD4Q96BZ4 506 aa12.46□□□□□ -0.41
NUP54-201ENST00000264883 ZNF436Q9C0F3 470 aaPredicted RBP12.46□□□□□ -0.41
NUP54-201ENST00000264883 KCTD5Q9NXV2 234 aa12.46□□□□□ -0.41
NUP54-201ENST00000264883 FNDC3AQ9Y2H6 1198 aaKnown RBP12.46□□□□□ -0.41
NUP54-201ENST00000264883 MEIKINA0A087WXM9 373 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 A8MXK9 166 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 NBNO60934 754 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 PLATP00750 562 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 OPN1SWP03999 348 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 ACRV1P26436 265 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 MNX1P50219 401 aaPredicted RBP12.45□□□□□ -0.42
NUP54-201ENST00000264883 PTPN5P54829 565 aa12.45□□□□□ -0.42
NUP54-201ENST00000264883 SNRPGP62308 76 aaKnown RBP12.45□□□□□ -0.42
NUP54-201ENST00000264883 CSTF1Q05048 431 aaKnown RBP12.45□□□□□ -0.42
NUP54-201ENST00000264883 ZNF91Q05481 1191 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms