RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 METTL7AQ9H8H3 244 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 NMRK1Q9NWW6 199 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 QPCTLQ9NXS2 382 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 Q9UFV3 132 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 BCAP29Q9UHQ4 241 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 PSME2Q9UL46 239 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 TMCO1Q9UM00 188 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 CAMK2AQ9UQM7 478 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 CACNA1CQ13936 2221 aa11.27□□□□□ -0.61
TRAF4-202ENST00000262396 A0A1W2PR48 441 aa11.26□□□□□ -0.61
TRAF4-202ENST00000262396 ESYT3A0FGR9 886 aa11.26□□□□□ -0.61
TRAF4-202ENST00000262396 LRRC14BA6NHZ5 514 aa11.26□□□□□ -0.61
TRAF4-202ENST00000262396 GOLGA6L10A6NI86 522 aa11.26□□□□□ -0.61
TRAF4-202ENST00000262396 FOXE1O00358 373 aaPredicted RBP11.26□□□□□ -0.61
TRAF4-202ENST00000262396 TMPRSS11DO60235 418 aa11.26□□□□□ -0.61
TRAF4-202ENST00000262396 ERAL1O75616 437 aaKnown RBP11.26□□□□□ -0.61
TRAF4-202ENST00000262396 SNX4O95219 450 aa11.26□□□□□ -0.61
TRAF4-202ENST00000262396 SIX3O95343 332 aaPredicted RBP11.26□□□□□ -0.61
TRAF4-202ENST00000262396 KLK1P06870 262 aa11.26□□□□□ -0.61
TRAF4-202ENST00000262396 SSTR4P31391 388 aa11.26□□□□□ -0.61
TRAF4-202ENST00000262396 XKP51811 444 aa11.26□□□□□ -0.61
TRAF4-202ENST00000262396 MAPK12P53778 367 aa11.26□□□□□ -0.61
TRAF4-202ENST00000262396 SLC37A1P57057 533 aa11.26□□□□□ -0.61
TRAF4-202ENST00000262396 PPP2R2AP63151 447 aa11.26□□□□□ -0.61
TRAF4-202ENST00000262396 GUCY2DQ02846 1103 aa11.26□□□□□ -0.61
TRAF4-202ENST00000262396 PCDH1Q08174 1060 aa11.26□□□□□ -0.61
TRAF4-202ENST00000262396 E2F2Q14209 437 aa11.26□□□□□ -0.61
TRAF4-202ENST00000262396 EBPQ15125 230 aaKnown RBP11.26□□□□□ -0.61
TRAF4-202ENST00000262396 RPS6KA2Q15349 733 aa11.26□□□□□ -0.61
TRAF4-202ENST00000262396 PCBP2Q15366 365 aaKnown RBP eCLIP11.26□□□□□ -0.614e-7■■■□□ 17.9
TRAF4-202ENST00000262396 TEX35Q5T0J7 233 aa11.26□□□□□ -0.61
TRAF4-202ENST00000262396 TMEM64Q6YI46 380 aa11.26□□□□□ -0.61
TRAF4-202ENST00000262396 MILR1Q7Z6M3 343 aa11.26□□□□□ -0.61
TRAF4-202ENST00000262396 ZZZ3Q8IYH5 903 aa11.26□□□□□ -0.61
TRAF4-202ENST00000262396 ULK2Q8IYT8 1036 aa11.26□□□□□ -0.61
TRAF4-202ENST00000262396 PRR22Q8IZ63 422 aa11.26□□□□□ -0.61
TRAF4-202ENST00000262396 CENPLQ8N0S6 344 aaPredicted RBP11.26□□□□□ -0.61
TRAF4-202ENST00000262396 HSPBAP1Q96EW2 488 aa11.26□□□□□ -0.61
TRAF4-202ENST00000262396 CDK15Q96Q40 435 aa11.26□□□□□ -0.61
TRAF4-202ENST00000262396 DDX31Q9H8H2 851 aaKnown RBP11.26□□□□□ -0.61
TRAF4-202ENST00000262396 ACKR4Q9NPB9 350 aa11.26□□□□□ -0.61
TRAF4-202ENST00000262396 SPRR3Q9UBC9 169 aa11.26□□□□□ -0.61
TRAF4-202ENST00000262396 SLC12A4Q9UP95 1085 aa11.26□□□□□ -0.61
TRAF4-202ENST00000262396 CFL2Q9Y281 166 aa11.26□□□□□ -0.61
TRAF4-202ENST00000262396 ASB4Q9Y574 426 aa11.26□□□□□ -0.61
TRAF4-202ENST00000262396 FAM215AQ9Y5M1 114 aa11.26□□□□□ -0.61
TRAF4-202ENST00000262396 NPFFR2Q9Y5X5 522 aa11.26□□□□□ -0.61
TRAF4-202ENST00000262396 A0A0A6YYD5 115 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 WASHC1A8K0Z3 465 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 AHRRA9YTQ3 701 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 GNB5O14775 395 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 CDH16O75309 829 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 KRT38O76015 456 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 SEMA3DO95025 777 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 ACSL3O95573 720 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 RFPL3SP0C7P2 107 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 MTHFD2P13995 350 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 PORP16435 677 aaPredicted RBP11.25□□□□□ -0.61
TRAF4-202ENST00000262396 IGFBP2P18065 325 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 GALNSP34059 522 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 BSGP35613 385 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 ALDH9A1P49189 494 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 FBXW4P57775 412 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 TFF3Q07654 80 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 DUSP8Q13202 625 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 RCAN2Q14206 197 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 NTRK2Q16620 822 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 TSNAXIP1Q2TAA8 658 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 FRG2Q64ET8 278 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 METTL2BQ6P1Q9 378 aaKnown RBP11.25□□□□□ -0.61
TRAF4-202ENST00000262396 LRRC25Q8N386 305 aaPredicted RBP11.25□□□□□ -0.61
TRAF4-202ENST00000262396 CHDHQ8NE62 594 aaPredicted RBP11.25□□□□□ -0.61
TRAF4-202ENST00000262396 IFT81Q8WYA0 676 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 TP53INP1Q96A56 240 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 DTNBP1Q96EV8 351 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 RMND5BQ96G75 393 aaPredicted RBP11.25□□□□□ -0.61
TRAF4-202ENST00000262396 RILPQ96NA2 401 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 FRG2BQ96QU4 278 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 TRIB1Q96RU8 372 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 TREX2Q9BQ50 279 aaPredicted RBP11.25□□□□□ -0.61
TRAF4-202ENST00000262396 FAIM2Q9BWQ8 316 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 TSPYL1Q9H0U9 437 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 OR10A5Q9H207 317 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 TEX10Q9NXF1 929 aaPredicted RBP11.25□□□□□ -0.61
TRAF4-202ENST00000262396 PSD3Q9NYI0 1048 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 KLRF1Q9NZS2 232 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 TSC22D4Q9Y3Q8 395 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 CHCHD2Q9Y6H1 151 aaPredicted RBP11.25□□□□□ -0.61
TRAF4-202ENST00000262396 ZNF780BQ9Y6R6 833 aa11.25□□□□□ -0.61
TRAF4-202ENST00000262396 CCDC168Q8NDH2 2452 aa11.24□□□□□ -0.61
TRAF4-202ENST00000262396 EEF1E1-BLOC1S5C9J1V9 151 aa11.24□□□□□ -0.61
TRAF4-202ENST00000262396 POC1B-GALNT4F8VUJ3 575 aa11.24□□□□□ -0.61
TRAF4-202ENST00000262396 PGRMC2O15173 223 aa11.24□□□□□ -0.61
TRAF4-202ENST00000262396 EEF1E1O43324 174 aaKnown RBP11.24□□□□□ -0.61
TRAF4-202ENST00000262396 URI1O94763 535 aaPredicted RBP11.24□□□□□ -0.61
TRAF4-202ENST00000262396 C1QAP02745 245 aa11.24□□□□□ -0.61
TRAF4-202ENST00000262396 DNASE1P24855 282 aa11.24□□□□□ -0.61
TRAF4-202ENST00000262396 KRT20P35900 424 aa11.24□□□□□ -0.61
TRAF4-202ENST00000262396 ADH7P40394 386 aa11.24□□□□□ -0.61
TRAF4-202ENST00000262396 SERPINB9P50453 376 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms