RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 SOX18P35713 384 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 MAP2K3P46734 347 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 IL18Q14116 193 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 INSL4Q14641 139 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 SYPL1Q16563 259 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 TMEM201Q5SNT2 666 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 CNIH2Q6PI25 160 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 PRR23CQ6ZRP0 262 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 TRMT11Q7Z4G4 463 aaKnown RBP16.55■□□□□ 0.24
TRAM1-201ENST00000262213 TRAPPC5Q8IUR0 188 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 ZNF557Q8N988 423 aaPredicted RBP16.55■□□□□ 0.24
TRAM1-201ENST00000262213 OR5D16Q8NGK9 328 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 OR2A12Q8NGT7 310 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 SLC9A6Q92581 669 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 MSLNLQ96KJ4 702 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 DHRS1Q96LJ7 313 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 ZNF582Q96NG8 517 aaPredicted RBP16.55■□□□□ 0.24
TRAM1-201ENST00000262213 KCNK12Q9HB15 430 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 ACOXLQ9NUZ1 547 aa16.55■□□□□ 0.24
TRAM1-201ENST00000262213 A0A0X1KG70 313 aa16.54■□□□□ 0.24
TRAM1-201ENST00000262213 ALPPP05187 535 aa16.54■□□□□ 0.24
TRAM1-201ENST00000262213 SRPRAP08240 638 aaKnown RBP16.54■□□□□ 0.24
TRAM1-201ENST00000262213 TRAPPC2P0DI81 140 aa16.54■□□□□ 0.24
TRAM1-201ENST00000262213 TRAPPC2BP0DI82 140 aa16.54■□□□□ 0.24
TRAM1-201ENST00000262213 BTBD16Q32M84 506 aa16.54■□□□□ 0.24
TRAM1-201ENST00000262213 LHFPL3Q86UP9 236 aa16.54■□□□□ 0.24
TRAM1-201ENST00000262213 GRPEL2Q8TAA5 225 aa16.54■□□□□ 0.24
TRAM1-201ENST00000262213 XAGE5Q8WWM1 108 aa16.54■□□□□ 0.24
TRAM1-201ENST00000262213 RIPOR3Q96MK2 946 aa16.54■□□□□ 0.24
TRAM1-201ENST00000262213 EFCAB11Q9BUY7 163 aa16.54■□□□□ 0.24
TRAM1-201ENST00000262213 PRR14Q9BWN1 585 aa16.54■□□□□ 0.24
TRAM1-201ENST00000262213 CPEB1Q9BZB8 566 aaKnown RBP16.54■□□□□ 0.24
TRAM1-201ENST00000262213 TBC1D17Q9HA65 648 aa16.54■□□□□ 0.24
TRAM1-201ENST00000262213 TRPC4Q9UBN4 977 aa16.54■□□□□ 0.24
TRAM1-201ENST00000262213 A0A0G2JN53 185 aa16.54■□□□□ 0.24
TRAM1-201ENST00000262213 TSC22D2O75157 780 aa16.54■□□□□ 0.24
TRAM1-201ENST00000262213 EPHX1P07099 455 aa16.54■□□□□ 0.24
TRAM1-201ENST00000262213 CYP2A6P11509 494 aaPredicted RBP16.54■□□□□ 0.24
TRAM1-201ENST00000262213 MMP11P24347 488 aa16.54■□□□□ 0.24
TRAM1-201ENST00000262213 RPL3P39023 403 aaKnown RBP16.54■□□□□ 0.24
TRAM1-201ENST00000262213 MLLT3P42568 568 aaPredicted RBP16.54■□□□□ 0.24
TRAM1-201ENST00000262213 FABP5Q01469 135 aa16.54■□□□□ 0.24
TRAM1-201ENST00000262213 MAP4K2Q12851 820 aa16.54■□□□□ 0.24
TRAM1-201ENST00000262213 FAPQ12884 760 aa16.54■□□□□ 0.24
TRAM1-201ENST00000262213 C6orf120Q7Z4R8 191 aa16.54■□□□□ 0.24
TRAM1-201ENST00000262213 SLC5A11Q8WWX8 675 aa16.54■□□□□ 0.24
TRAM1-201ENST00000262213 UCN3Q969E3 161 aa16.54■□□□□ 0.24
TRAM1-201ENST00000262213 GLYATL1Q969I3 302 aa16.54■□□□□ 0.24
TRAM1-201ENST00000262213 TRIM63Q969Q1 353 aa16.54■□□□□ 0.24
TRAM1-201ENST00000262213 AP2M1Q96CW1 435 aa16.54■□□□□ 0.24
TRAM1-201ENST00000262213 MTERF3Q96E29 417 aa16.54■□□□□ 0.24
TRAM1-201ENST00000262213 GPA33Q99795 319 aa16.54■□□□□ 0.24
TRAM1-201ENST00000262213 TMED9Q9BVK6 235 aa16.54■□□□□ 0.24
TRAM1-201ENST00000262213 EGLN3Q9H6Z9 239 aa16.54■□□□□ 0.24
TRAM1-201ENST00000262213 CCL26Q9Y258 94 aa16.54■□□□□ 0.24
TRAM1-201ENST00000262213 LOC102723532A0A0G2JNH3 316 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 FAM240BA0A1B0GVZ2 78 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 LEFTY2O00292 366 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 B4GALT2O60909 372 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 TP53P04637 393 aaPredicted RBP16.53■□□□□ 0.24
TRAM1-201ENST00000262213 NR2F6P10588 404 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 CPEP16870 476 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 INPP1P49441 399 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 HENMT1Q5T8I9 393 aaKnown RBP16.53■□□□□ 0.24
TRAM1-201ENST00000262213 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.53■□□□□ 0.24
TRAM1-201ENST00000262213 TRAM1L1Q8N609 369 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 CLDN22Q8N7P3 220 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 FAM181AQ8N9Y4 354 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 ZBED6CLQ96FA7 236 aaPredicted RBP16.53■□□□□ 0.24
TRAM1-201ENST00000262213 DCLRE1CQ96SD1 692 aaKnown RBP16.53■□□□□ 0.24
TRAM1-201ENST00000262213 HDHD5Q9BXW7 423 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 B3GAT2Q9NPZ5 323 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 DIMT1Q9UNQ2 313 aaKnown RBP16.53■□□□□ 0.24
TRAM1-201ENST00000262213 FOXE1O00358 373 aaPredicted RBP16.53■□□□□ 0.24
TRAM1-201ENST00000262213 SLC30A4O14863 429 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 GRM6O15303 877 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 HOXA2O43364 376 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 NTN1O95631 604 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 OR12D1P0DN82 309 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 AVPR1BP47901 424 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 WNT4P56705 351 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 CEP78Q5JTW2 689 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 CLEC12AQ5QGZ9 265 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 TPGS2Q68CL5 300 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 HTR3DQ70Z44 454 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 ZER1Q7Z7L7 766 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 OR4K5Q8NGD3 323 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 DEDD2Q8WXF8 326 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 RNFT2Q96EX2 444 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 TEFMQ96QE5 360 aaKnown RBP16.53■□□□□ 0.24
TRAM1-201ENST00000262213 F2RL3Q96RI0 385 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 YIPF4Q9BSR8 244 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 FNDC11Q9BVV2 318 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 PLA2G12AQ9BZM1 189 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 SPG21Q9NZD8 308 aa16.53■□□□□ 0.24
TRAM1-201ENST00000262213 KIAA1671Q9BY89 1806 aa16.52■□□□□ 0.24
TRAM1-201ENST00000262213 ARHGEF9O43307 516 aa16.52■□□□□ 0.24
TRAM1-201ENST00000262213 CTSAP10619 480 aa16.52■□□□□ 0.24
TRAM1-201ENST00000262213 MAPK12P53778 367 aa16.52■□□□□ 0.24
TRAM1-201ENST00000262213 WSCD2Q2TBF2 565 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms