RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 FOXD2O60548 495 aaPredicted RBP11.56□□□□□ -0.56
COL8A1-201ENST00000261037 RBMXP38159 391 aaKnown RBP11.56□□□□□ -0.56
COL8A1-201ENST00000261037 KANK2Q63ZY3 851 aa11.56□□□□□ -0.56
COL8A1-201ENST00000261037 PIAS4Q8N2W9 510 aaPredicted RBP11.56□□□□□ -0.56
COL8A1-201ENST00000261037 LMO3Q8TAP4 145 aa11.56□□□□□ -0.56
COL8A1-201ENST00000261037 TMEM121BQ9BXQ6 578 aaPredicted RBP11.56□□□□□ -0.56
COL8A1-201ENST00000261037 RXFP3Q9NSD7 469 aa11.56□□□□□ -0.56
COL8A1-201ENST00000261037 SPEF1Q9Y4P9 236 aa11.56□□□□□ -0.56
COL8A1-201ENST00000261037 A6NLC8 198 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 RAD51DO75771 328 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 RGS9O75916 674 aaPredicted RBP11.55□□□□□ -0.56
COL8A1-201ENST00000261037 PRLP01236 227 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 ZNF35P13682 527 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 BPIP17213 487 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 FDXRP22570 491 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 GCGRP47871 477 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 CST6Q15828 149 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 LPAL2Q16609 132 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 MEDAGQ5VYS4 303 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 FAM217AQ8IXS0 508 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 CENPSQ8N2Z9 138 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 TTC9BQ8N6N2 239 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 ZSCAN1Q8NBB4 408 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 ZNF689Q96CS4 500 aaPredicted RBP11.55□□□□□ -0.56
COL8A1-201ENST00000261037 ZNF778Q96MU6 729 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 MROQ9BYG7 248 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 HAPLN2Q9GZV7 340 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 SEC14L4Q9UDX3 406 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 SLC7A11Q9UPY5 501 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 HSPB11Q9Y547 144 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 FESP07332 822 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 IL1RNP18510 177 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 MAP4K2Q12851 820 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 PHC2Q8IXK0 858 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 CHST14Q8NCH0 376 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 OR52E2Q8NGJ4 325 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 PROKR1Q8TCW9 393 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 PRR11Q96HE9 360 aaPredicted RBP11.55□□□□□ -0.56
COL8A1-201ENST00000261037 NELL2Q99435 816 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 PCDHGB6Q9Y5F9 930 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.55□□□□□ -0.56
COL8A1-201ENST00000261037 ATP6V1G1O75348 118 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 STSP08842 583 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 POU3F4P49335 361 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 AFF1P51825 1210 aaKnown RBP11.55□□□□□ -0.56
COL8A1-201ENST00000261037 SERINC5Q86VE9 423 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 NPWQ8N729 165 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 PNPLA1Q8N8W4 532 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 CREB3L4Q8TEY5 395 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 RAB7BQ96AH8 199 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 CIDECQ96AQ7 238 aaPredicted RBP11.55□□□□□ -0.56
COL8A1-201ENST00000261037 BORCS6Q96GS4 357 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 RANBP9Q96S59 729 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 MVB12BQ9H7P6 319 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 MAN2C1Q9NTJ4 1040 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 AIG1Q9NVV5 245 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 VEGFDO43915 354 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 ETFAP13804 333 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 GRIA2P42262 883 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 NTHL1P78549 312 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 MOGQ16653 247 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 TBRG1Q3YBR2 411 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 LEG1Q6P5S2 330 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 HS3ST5Q8IZT8 346 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 TCEAL3Q969E4 200 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 C7orf34Q96L11 122 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 MTG2Q9H4K7 406 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 GPR52Q9Y2T5 361 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 RGPD5Q99666 1765 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 A0A0G2JPF8 293 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 TRBV2A0A0J9YWF9 115 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 MEIS3P2A8K0S8 358 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 HNRNPCL3B7ZW38 293 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 M0R129 80 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 HNRNPCL4P0DMR1 293 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 SELENOVP59797 346 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 MRPL49Q13405 166 aaKnown RBP11.55□□□□□ -0.56
COL8A1-201ENST00000261037 APOFQ13790 326 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 FAM189A2Q15884 450 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 UMODL1-AS1Q8N2C9 162 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 ZNF709Q8N972 641 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 TBC1D15Q8TC07 691 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 HDAC2Q92769 488 aaKnown RBP11.55□□□□□ -0.56
COL8A1-201ENST00000261037 SGTBQ96EQ0 304 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 IL23AQ9NPF7 189 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 STARD5Q9NSY2 213 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 REV1Q9UBZ9 1251 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 BACE2Q9Y5Z0 518 aa11.55□□□□□ -0.56
COL8A1-201ENST00000261037 hCG_1807616A0A1W2PRN6 198 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 TRIM64BA6NI03 449 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 ZNF850A8MQ14 1090 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 EPOP01588 193 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 ANXA3P12429 323 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 AMY2BP19961 511 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 DUSP3P51452 185 aaPredicted RBP11.54□□□□□ -0.56
COL8A1-201ENST00000261037 ZNF81P51508 661 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 GPR143P51810 404 aa11.54□□□□□ -0.56
COL8A1-201ENST00000261037 AIMP2Q13155 320 aaKnown RBP11.54□□□□□ -0.56
COL8A1-201ENST00000261037 ELOAQ14241 798 aaKnown RBP11.54□□□□□ -0.56
COL8A1-201ENST00000261037 SPATS1Q496A3 300 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms