RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 LAPTM4BQ86VI4 370 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 TIGD4Q8IY51 512 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 C19orf18Q8NEA5 215 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 SMAP2Q8WU79 429 aaPredicted RBP12.54□□□□□ -0.4
PGBD1-201ENST00000259883 C11orf24Q96F05 449 aaPredicted RBP12.54□□□□□ -0.4
PGBD1-201ENST00000259883 ZNF558Q96NG5 402 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 OR2B2Q9GZK3 357 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 NXF2Q9GZY0 626 aaKnown RBP12.54□□□□□ -0.4
PGBD1-201ENST00000259883 MIXL1Q9H2W2 232 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 ATP6V1HQ9UI12 483 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 STUB1Q9UNE7 303 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 SNX7Q9UNH6 387 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 F5P12259 2224 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 ANAPC1Q9H1A4 1944 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 A0A0B4J293 547 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 B4GALT2O60909 372 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 CYP2A6P11509 494 aaPredicted RBP12.54□□□□□ -0.4
PGBD1-201ENST00000259883 NNMTP40261 264 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 HTR2BP41595 481 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 KIR2DL3P43628 341 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 FCHO2Q0JRZ9 810 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 SREBF2Q12772 1141 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 QPRTQ15274 297 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 SMARCD3Q6STE5 483 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 PLET1Q6UQ28 207 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 UNC5DQ6UXZ4 953 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 LAS2Q8IYD9 372 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 VN1R2Q8NFZ6 395 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 PHF21AQ96BD5 680 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 RNF31Q96EP0 1072 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 LYSMD1Q96S90 227 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 C17orf62Q9BQA9 187 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 MND1Q9BWT6 205 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 CDCA4Q9BXL8 241 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 SRRQ9GZT4 340 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 BEX1Q9HBH7 125 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 CAPN10Q9HC96 672 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 ZCCHC3Q9NUD5 404 aaKnown RBP12.54□□□□□ -0.4
PGBD1-201ENST00000259883 BACE2Q9Y5Z0 518 aa12.54□□□□□ -0.4
PGBD1-201ENST00000259883 ZC3H12DA2A288 527 aaKnown RBP12.53□□□□□ -0.4
PGBD1-201ENST00000259883 PLPP1O14494 284 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 CAPN5O15484 640 aaPredicted RBP12.53□□□□□ -0.4
PGBD1-201ENST00000259883 OR1F1O43749 312 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 HOXB6P17509 224 aaKnown RBP12.53□□□□□ -0.4
PGBD1-201ENST00000259883 MMP11P24347 488 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 FAM71E1Q6IPT2 247 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 SLC30A6Q6NXT4 461 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 PGBD2Q6P3X8 592 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 ADGRF3Q8IZF5 1079 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 OR52I1Q8NGK6 324 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 OR56A3Q8NH54 315 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 C9orf43Q8TAL5 461 aaPredicted RBP12.53□□□□□ -0.4
PGBD1-201ENST00000259883 TM9SF4Q92544 642 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 COL26A1Q96A83 441 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 RAD9AQ99638 391 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 TREX2Q9BQ50 279 aaPredicted RBP12.53□□□□□ -0.4
PGBD1-201ENST00000259883 SLX1AQ9BQ83 275 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 HDHD2Q9H0R4 259 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 TEKT2Q9UIF3 430 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 FAM240BA0A1B0GVZ2 78 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 PDPK1O15530 556 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 HOXA2O43364 376 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 TPD52L2O43399 206 aaKnown RBP12.53□□□□□ -0.4
PGBD1-201ENST00000259883 KLHL18O94889 574 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 ACRP10323 421 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 CCT3P49368 545 aaKnown RBP12.53□□□□□ -0.4
PGBD1-201ENST00000259883 CTBP2P56545 445 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 HYAL2Q12891 473 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 NCF4Q15080 339 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 GPR19Q15760 415 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 FLYWCH1Q4VC44 716 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 PPP2R2DQ66LE6 453 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 FAM83HQ6ZRV2 1179 aaPredicted RBP12.53□□□□□ -0.4
PGBD1-201ENST00000259883 SFTPA1Q8IWL2 248 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 YIPF7Q8N8F6 280 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 OR6T1Q8NGN1 323 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 ZG16BQ96DA0 208 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 SLC22A4Q9H015 551 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 BRF2Q9HAW0 419 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 REV1Q9UBZ9 1251 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 HS3ST2Q9Y278 367 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 RPL36Q9Y3U8 105 aaKnown RBP12.53□□□□□ -0.4
PGBD1-201ENST00000259883 DOCK9Q9BZ29 2069 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 ALDH1A1P00352 501 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 SLC2A2P11168 524 aaPredicted RBP12.53□□□□□ -0.4
PGBD1-201ENST00000259883 CLDN2P57739 230 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 CDK10Q15131 360 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 TATDN3Q17R31 274 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 PRAMEF14Q5SWL7 426 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 HENMT1Q5T8I9 393 aaKnown RBP12.53□□□□□ -0.4
PGBD1-201ENST00000259883 PRAMEF13Q5VWM6 474 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 CNIH2Q6PI25 160 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 NXPE4Q6UWF7 544 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 RNF165Q6ZSG1 346 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 PARS2Q7L3T8 475 aaKnown RBP12.53□□□□□ -0.4
PGBD1-201ENST00000259883 RRM2BQ7LG56 351 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 DGLUCYQ7Z3D6 616 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 ZER1Q7Z7L7 766 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 TRIM69Q86WT6 500 aa12.53□□□□□ -0.4
PGBD1-201ENST00000259883 Q8N402 240 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms