RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 S1PR1P21453 382 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 POLR2JP52435 117 aaKnown RBP13.16□□□□□ -0.3
VPS25-201ENST00000253794 RRADP55042 308 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 AP2B1P63010 937 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 PHC1P78364 1004 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 FUT7Q11130 342 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 FAM174BQ3ZCQ3 159 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 SPANXN4Q5MJ08 99 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 ATP1A1-AS1Q5TC04 95 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 ANXA8L1Q5VT79 327 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 PAOXQ6QHF9 649 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 CCDC116Q8IYX3 515 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 ARMC10Q8N2F6 343 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 APCDD1LQ8NCL9 501 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 OR9I1Q8NGQ6 314 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 ZFP28Q8NHY6 868 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 ELP5Q8TE02 316 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 NUDT8Q8WV74 236 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 OR5P2Q8WZ92 322 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 RIT1Q92963 219 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 CIDECQ96AQ7 238 aaPredicted RBP13.16□□□□□ -0.3
VPS25-201ENST00000253794 PPWD1Q96BP3 646 aaKnown RBP13.16□□□□□ -0.3
VPS25-201ENST00000253794 MYLK2Q9H1R3 596 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 NEUROD4Q9HD90 331 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 MMP25Q9NPA2 562 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 NTMQ9P121 344 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 ZMIZ1Q9ULJ6 1067 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 G3BP2Q9UN86 482 aaKnown RBP13.16□□□□□ -0.3
VPS25-201ENST00000253794 ARL2BPQ9Y2Y0 163 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 USP24Q9UPU5 2620 aa13.16□□□□□ -0.3
VPS25-201ENST00000253794 PKD1L2Q7Z442 2459 aa13.15□□□□□ -0.3
VPS25-201ENST00000253794 PRSS51A0A1B0GVH4 220 aa13.15□□□□□ -0.3
VPS25-201ENST00000253794 DYRK3O43781 588 aa13.15□□□□□ -0.3
VPS25-201ENST00000253794 CCDC22O60826 627 aa13.15□□□□□ -0.3
VPS25-201ENST00000253794 SEC24DO94855 1032 aaPredicted RBP13.15□□□□□ -0.3
VPS25-201ENST00000253794 SERPINA7P05543 415 aa13.15□□□□□ -0.3
VPS25-201ENST00000253794 PRKAR1AP10644 381 aa13.15□□□□□ -0.3
VPS25-201ENST00000253794 S100A3P33764 101 aa13.15□□□□□ -0.3
VPS25-201ENST00000253794 NCBP2P52298 156 aaKnown RBP eCLIP13.15□□□□□ -0.3
VPS25-201ENST00000253794 NME5P56597 212 aa13.15□□□□□ -0.3
VPS25-201ENST00000253794 AIMP2Q13155 320 aaKnown RBP13.15□□□□□ -0.3
VPS25-201ENST00000253794 FHL5Q5TD97 284 aa13.15□□□□□ -0.3
VPS25-201ENST00000253794 GKAP1Q5VSY0 366 aaPredicted RBP13.15□□□□□ -0.3
VPS25-201ENST00000253794 OR4F3Q6IEY1 312 aa13.15□□□□□ -0.3
VPS25-201ENST00000253794 FAM180BQ6P0A1 224 aa13.15□□□□□ -0.3
VPS25-201ENST00000253794 VPS37AQ8NEZ2 397 aa13.15□□□□□ -0.3
VPS25-201ENST00000253794 OR7G1Q8NGA0 311 aa13.15□□□□□ -0.3
VPS25-201ENST00000253794 OR1N1Q8NGS0 311 aa13.15□□□□□ -0.3
VPS25-201ENST00000253794 OR9A2Q8NGT5 310 aa13.15□□□□□ -0.3
VPS25-201ENST00000253794 OR8K3Q8NH51 312 aa13.15□□□□□ -0.3
VPS25-201ENST00000253794 GOT1L1Q8NHS2 421 aaPredicted RBP13.15□□□□□ -0.3
VPS25-201ENST00000253794 SLC2A12Q8TD20 617 aa13.15□□□□□ -0.3
VPS25-201ENST00000253794 ZNF721Q8TF20 911 aa13.15□□□□□ -0.3
VPS25-201ENST00000253794 VMP1Q96GC9 406 aa13.15□□□□□ -0.3
VPS25-201ENST00000253794 SENP5Q96HI0 755 aaPredicted RBP13.15□□□□□ -0.3
VPS25-201ENST00000253794 CCDC115Q96NT0 180 aa13.15□□□□□ -0.3
VPS25-201ENST00000253794 NMUR2Q9GZQ4 415 aa13.15□□□□□ -0.3
VPS25-201ENST00000253794 ZNF160Q9HCG1 818 aa13.15□□□□□ -0.3
VPS25-201ENST00000253794 CPNE5Q9HCH3 593 aa13.15□□□□□ -0.3
VPS25-201ENST00000253794 ATP13A2Q9NQ11 1180 aa13.15□□□□□ -0.3
VPS25-201ENST00000253794 PTGFRNQ9P2B2 879 aa13.15□□□□□ -0.3
VPS25-201ENST00000253794 BTNL2Q9UIR0 455 aa13.15□□□□□ -0.3
VPS25-201ENST00000253794 MAN2B2Q9Y2E5 1009 aa13.15□□□□□ -0.3
VPS25-201ENST00000253794 DSPP15924 2871 aaKnown RBP13.15□□□□□ -0.3
VPS25-201ENST00000253794 MAP1BP46821 2468 aaKnown RBP13.14□□□□□ -0.31
VPS25-201ENST00000253794 MYOCOSA0A1B0GUC4 107 aa13.14□□□□□ -0.31
VPS25-201ENST00000253794 A0A1W2PRB8 838 aa13.14□□□□□ -0.31
VPS25-201ENST00000253794 OR6C76A6NM76 312 aa13.14□□□□□ -0.31
VPS25-201ENST00000253794 CEACAM4O75871 244 aa13.14□□□□□ -0.31
VPS25-201ENST00000253794 BCAS2O75934 225 aaPredicted RBP13.14□□□□□ -0.31
VPS25-201ENST00000253794 PSMG1O95456 288 aa13.14□□□□□ -0.31
VPS25-201ENST00000253794 CLPSP04118 112 aa13.14□□□□□ -0.31
VPS25-201ENST00000253794 ITGB2P05107 769 aa13.14□□□□□ -0.31
VPS25-201ENST00000253794 CT62P0C5K7 136 aa13.14□□□□□ -0.31
VPS25-201ENST00000253794 NT5EP21589 574 aa13.14□□□□□ -0.31
VPS25-201ENST00000253794 MANFP55145 182 aaKnown RBP13.14□□□□□ -0.31
VPS25-201ENST00000253794 SLC37A1P57057 533 aa13.14□□□□□ -0.31
VPS25-201ENST00000253794 Q0VFX4 171 aa13.14□□□□□ -0.31
VPS25-201ENST00000253794 SF3A3Q12874 501 aaKnown RBP eCLIP13.14□□□□□ -0.317e-86■■■■■ 64.7
VPS25-201ENST00000253794 CHAF1BQ13112 559 aa13.14□□□□□ -0.31
VPS25-201ENST00000253794 LTB4RQ15722 352 aa13.14□□□□□ -0.31
VPS25-201ENST00000253794 PGS1Q32NB8 556 aa13.14□□□□□ -0.31
VPS25-201ENST00000253794 H3F3CQ6NXT2 135 aa13.14□□□□□ -0.31
VPS25-201ENST00000253794 JMJD6Q6NYC1 403 aaPredicted RBP13.14□□□□□ -0.31
VPS25-201ENST00000253794 TMEM64Q6YI46 380 aa13.14□□□□□ -0.31
VPS25-201ENST00000253794 OR2L13Q8N349 312 aa13.14□□□□□ -0.31
VPS25-201ENST00000253794 VWA5B2Q8N398 1253 aa13.14□□□□□ -0.31
VPS25-201ENST00000253794 CLEC1AQ8NC01 280 aa13.14□□□□□ -0.31
VPS25-201ENST00000253794 CNTNAP3BQ96NU0 1288 aa13.14□□□□□ -0.31
VPS25-201ENST00000253794 CNTNAP3Q9BZ76 1288 aa13.14□□□□□ -0.31
VPS25-201ENST00000253794 TRIM4Q9C037 500 aa13.14□□□□□ -0.31
VPS25-201ENST00000253794 PRORYQ9H606 182 aa13.14□□□□□ -0.31
VPS25-201ENST00000253794 SERHLQ9NQF3 203 aa13.14□□□□□ -0.31
VPS25-201ENST00000253794 SIRT3Q9NTG7 399 aaPredicted RBP13.14□□□□□ -0.31
VPS25-201ENST00000253794 RYDENQ9NUL5 291 aaKnown RBP13.14□□□□□ -0.31
VPS25-201ENST00000253794 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.14□□□□□ -0.31
VPS25-201ENST00000253794 WDR70Q9NW82 654 aa13.14□□□□□ -0.31
VPS25-201ENST00000253794 ZNF223Q9UK11 482 aaPredicted RBP13.14□□□□□ -0.31
VPS25-201ENST00000253794 KCNMB2Q9Y691 235 aa13.14□□□□□ -0.31
VPS25-201ENST00000253794 SCN2AQ99250 2005 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms