RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 OR51I1Q9H343 314 aa21.99■■□□□ 1.11
SYNGR3-201ENST00000248121 FBXO4Q9UKT5 387 aa21.99■■□□□ 1.11
SYNGR3-201ENST00000248121 PCDHGA8Q9Y5G5 932 aa21.99■■□□□ 1.11
SYNGR3-201ENST00000248121 SCN2AQ99250 2005 aa21.98■■□□□ 1.11
SYNGR3-201ENST00000248121 SPTBP11277 2137 aa21.98■■□□□ 1.11
SYNGR3-201ENST00000248121 LILRA5A6NI73 299 aa21.98■■□□□ 1.11
SYNGR3-201ENST00000248121 CFIP05156 583 aa21.98■■□□□ 1.11
SYNGR3-201ENST00000248121 PROS1P07225 676 aa21.98■■□□□ 1.11
SYNGR3-201ENST00000248121 ARHGDIAP52565 204 aa21.98■■□□□ 1.11
SYNGR3-201ENST00000248121 RUNX2Q13950 521 aa21.98■■□□□ 1.11
SYNGR3-201ENST00000248121 TMEM64Q6YI46 380 aa21.98■■□□□ 1.11
SYNGR3-201ENST00000248121 RNF44Q7L0R7 432 aa21.98■■□□□ 1.11
SYNGR3-201ENST00000248121 SZRD1Q7Z422 152 aa21.98■■□□□ 1.11
SYNGR3-201ENST00000248121 THAP11Q96EK4 314 aa21.98■■□□□ 1.11
SYNGR3-201ENST00000248121 MAGED4Q96JG8 741 aa21.98■■□□□ 1.11
SYNGR3-201ENST00000248121 SLC35G5Q96KT7 338 aa21.98■■□□□ 1.11
SYNGR3-201ENST00000248121 ZNF300Q96RE9 604 aaPredicted RBP21.98■■□□□ 1.11
SYNGR3-201ENST00000248121 MAP3K3Q99759 626 aa21.98■■□□□ 1.11
SYNGR3-201ENST00000248121 THSD1Q9NS62 852 aa21.98■■□□□ 1.11
SYNGR3-201ENST00000248121 ZSCAN32Q9NX65 697 aa21.98■■□□□ 1.11
SYNGR3-201ENST00000248121 LYVE1Q9Y5Y7 322 aa21.98■■□□□ 1.11
SYNGR3-201ENST00000248121 LOC100130705A0A1B0GUX0 176 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 SMIM31A0A1B0GVY4 71 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 IFNA14P01570 189 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 C9P02748 559 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 OR12D1P0DN82 309 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 NR2F6P10588 404 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 EPHA8P29322 1005 aaPredicted RBP21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 YAP1P46937 504 aaKnown RBP21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 TUBA4AP68366 448 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 RFX4Q33E94 735 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 KANSL1Q7Z3B3 1105 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 ARMC8Q8IUR7 673 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 ZNF555Q8NEP9 628 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 APOBEC4Q8WW27 367 aaKnown RBP21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 ZC3H10Q96K80 434 aaKnown RBP21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 RUBCNLQ9H714 662 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 LRIT1Q9P2V4 623 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 ENTPD4Q9Y227 616 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 TESMINQ9Y4I5 508 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 WDR87Q6ZQQ6 2873 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 SLC16A6O15403 523 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 CSNK2A2P19784 350 aaPredicted RBP21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 CD247P20963 164 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 FUT4P22083 530 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 PAX7P23759 505 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 ALDH4A1P30038 563 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 RXRGP48443 463 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 ALDH3B2P48448 385 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 RAD23AP54725 363 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 SUZ12Q15022 739 aaKnown RBP21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 HLA-BQ31612 363 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 ARMC6Q6NXE6 501 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 FAHD1Q6P587 224 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 TMEM107Q6UX40 140 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 THAP5Q7Z6K1 395 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 C8orf59Q8N0T1 100 aaPredicted RBP21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 SDR16C5Q8N3Y7 309 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 AVL9Q8NBF6 648 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 CAMKVQ8NCB2 501 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 PIK3C3Q8NEB9 887 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 GEMIN6Q8WXD5 167 aaKnown RBP21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 OTUB1Q96FW1 271 aaPredicted RBP21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 SERINC2Q96SA4 455 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 CSF3RQ99062 836 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 RBM38Q9H0Z9 239 aaKnown RBP21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 SH3GLB1Q9Y371 365 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 PCDHGB3Q9Y5G1 929 aa21.97■■□□□ 1.11
SYNGR3-201ENST00000248121 J3KTA2 159 aa21.96■■□□□ 1.11
SYNGR3-201ENST00000248121 MFN2O95140 757 aa21.96■■□□□ 1.11
SYNGR3-201ENST00000248121 SP9P0CG40 484 aa21.96■■□□□ 1.11
SYNGR3-201ENST00000248121 OR1D5P58170 312 aa21.96■■□□□ 1.11
SYNGR3-201ENST00000248121 TNFRSF17Q02223 184 aa21.96■■□□□ 1.11
SYNGR3-201ENST00000248121 PUM1Q14671 1186 aaKnown RBP eCLIP21.96■■□□□ 1.11
SYNGR3-201ENST00000248121 SYPL1Q16563 259 aa21.96■■□□□ 1.11
SYNGR3-201ENST00000248121 PEAR1Q5VY43 1037 aaPredicted RBP21.96■■□□□ 1.11
SYNGR3-201ENST00000248121 PRSS41Q7RTY9 318 aa21.96■■□□□ 1.11
SYNGR3-201ENST00000248121 C11orf74Q86VG3 221 aa21.96■■□□□ 1.11
SYNGR3-201ENST00000248121 GPR32P1Q8NGA4 272 aa21.96■■□□□ 1.11
SYNGR3-201ENST00000248121 SMOC1Q9H4F8 434 aa21.96■■□□□ 1.11
SYNGR3-201ENST00000248121 UCK1Q9HA47 277 aa21.96■■□□□ 1.11
SYNGR3-201ENST00000248121 STARD5Q9NSY2 213 aa21.96■■□□□ 1.11
SYNGR3-201ENST00000248121 UNC13CQ8NB66 2214 aa21.96■■□□□ 1.11
SYNGR3-201ENST00000248121 SLC9B1P1A6NJY1 282 aa21.95■■□□□ 1.11
SYNGR3-201ENST00000248121 C5orf58C9J3I9 102 aa21.95■■□□□ 1.11
SYNGR3-201ENST00000248121 B4GAT1O43505 415 aa21.95■■□□□ 1.11
SYNGR3-201ENST00000248121 ITGAMP11215 1152 aa21.95■■□□□ 1.11
SYNGR3-201ENST00000248121 MATN1P21941 496 aa21.95■■□□□ 1.11
SYNGR3-201ENST00000248121 CDH3P22223 829 aa21.95■■□□□ 1.11
SYNGR3-201ENST00000248121 ARRB1P49407 418 aaPredicted RBP21.95■■□□□ 1.11
SYNGR3-201ENST00000248121 PRKAG1P54619 331 aa21.95■■□□□ 1.11
SYNGR3-201ENST00000248121 LIM2P55344 173 aa21.95■■□□□ 1.11
SYNGR3-201ENST00000248121 CTU2Q2VPK5 515 aaKnown RBP21.95■■□□□ 1.11
SYNGR3-201ENST00000248121 CNPY1Q3B7I2 92 aa21.95■■□□□ 1.11
SYNGR3-201ENST00000248121 OR4C15Q8NGM1 316 aa21.95■■□□□ 1.11
SYNGR3-201ENST00000248121 OR9A2Q8NGT5 310 aa21.95■■□□□ 1.11
SYNGR3-201ENST00000248121 SFXN5Q8TD22 340 aa21.95■■□□□ 1.11
SYNGR3-201ENST00000248121 ANKRA2Q9H9E1 313 aa21.95■■□□□ 1.11
SYNGR3-201ENST00000248121 SEMA3GQ9NS98 782 aa21.95■■□□□ 1.11
SYNGR3-201ENST00000248121 SUSD2Q9UGT4 822 aa21.95■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms