RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 SCHIP1Q9P0W5 487 aaPredicted RBP15.28■□□□□ 0.04
UBE3D-201ENST00000237186 TBC1D3DA0A087WVF3 549 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 TBC1D3IA0A087WXS9 549 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 TBC1D3EA0A087X179 549 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 TBC1D3KA0A087X1G2 549 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 A0A1W2PQF6 199 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 A0A1W2PRQ8 180 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 TBC1D3FA6NER0 549 aaPredicted RBP15.27■□□□□ 0.04
UBE3D-201ENST00000237186 PRR23AA6NEV1 266 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 WASHC1A8K0Z3 465 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 EFCAB9A8MZ26 197 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 TBC1D3LB9A6J9 549 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 PGRMC2O15173 223 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 MAGEB3O15480 346 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 STSP08842 583 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 TBC1D3HP0C7X1 549 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 NR2F1P10589 423 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 PIPP12273 146 aaPredicted RBP15.27■□□□□ 0.04
UBE3D-201ENST00000237186 SLC15A1P46059 708 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 LIMK1P53667 647 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 CRISP3P54108 245 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 LSM3P62310 102 aaKnown RBP15.27■□□□□ 0.04
UBE3D-201ENST00000237186 LRRC32Q14392 662 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 SLX4IPQ5VYV7 408 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 TBC1D3GQ6DHY5 549 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 TBC1D3CQ6IPX1 549 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 SLC48A1Q6P1K1 146 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 CD300LDQ6UXZ3 194 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 RBM45Q8IUH3 476 aaKnown RBP15.27■□□□□ 0.04
UBE3D-201ENST00000237186 FAM20CQ8IXL6 584 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 TBC1D3Q8IZP1 549 aaPredicted RBP15.27■□□□□ 0.04
UBE3D-201ENST00000237186 TMEM145Q8NBT3 493 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 OR6Q1Q8NGQ2 317 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 OR8K5Q8NH50 307 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 ZNF675Q8TD23 568 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 RPL3LQ92901 407 aaKnown RBP15.27■□□□□ 0.04
UBE3D-201ENST00000237186 GDF15Q99988 308 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 MOSPD1Q9UJG1 213 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.27■□□□□ 0.04
UBE3D-201ENST00000237186 SLC6A14Q9UN76 642 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 A4GNTQ9UNA3 340 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 NUMA1Q14980 2115 aa15.27■□□□□ 0.04
UBE3D-201ENST00000237186 ADAM23O75077 832 aa15.27■□□□□ 0.03
UBE3D-201ENST00000237186 ADORA3P0DMS8 318 aa15.27■□□□□ 0.03
UBE3D-201ENST00000237186 CNR2P34972 360 aa15.27■□□□□ 0.03
UBE3D-201ENST00000237186 NUDT6P53370 316 aa15.27■□□□□ 0.03
UBE3D-201ENST00000237186 OLR1P78380 273 aa15.27■□□□□ 0.03
UBE3D-201ENST00000237186 TOR1AIP1Q5JTV8 583 aa15.27■□□□□ 0.03
UBE3D-201ENST00000237186 TMEM236Q5W0B7 351 aa15.27■□□□□ 0.03
UBE3D-201ENST00000237186 PTCHD4Q6ZW05 846 aa15.27■□□□□ 0.03
UBE3D-201ENST00000237186 STX19Q8N4C7 294 aa15.27■□□□□ 0.03
UBE3D-201ENST00000237186 LINC00471Q8N535 108 aa15.27■□□□□ 0.03
UBE3D-201ENST00000237186 IL17RCQ8NAC3 791 aa15.27■□□□□ 0.03
UBE3D-201ENST00000237186 B3GNT7Q8NFL0 401 aa15.27■□□□□ 0.03
UBE3D-201ENST00000237186 OR56A1Q8NGH5 318 aa15.27■□□□□ 0.03
UBE3D-201ENST00000237186 CNRIP1Q96F85 164 aaPredicted RBP15.27■□□□□ 0.03
UBE3D-201ENST00000237186 OR2M4Q96R27 311 aa15.27■□□□□ 0.03
UBE3D-201ENST00000237186 WFDC6Q9BQY6 131 aa15.27■□□□□ 0.03
UBE3D-201ENST00000237186 ALOXE3Q9BYJ1 711 aa15.27■□□□□ 0.03
UBE3D-201ENST00000237186 TWSG1Q9GZX9 223 aa15.27■□□□□ 0.03
UBE3D-201ENST00000237186 CLN6Q9NWW5 311 aa15.27■□□□□ 0.03
UBE3D-201ENST00000237186 KLF15Q9UIH9 416 aa15.27■□□□□ 0.03
UBE3D-201ENST00000237186 PCOLCE2Q9UKZ9 415 aa15.27■□□□□ 0.03
UBE3D-201ENST00000237186 A0A0G2JPF8 293 aa15.26■□□□□ 0.03
UBE3D-201ENST00000237186 PRSS38A1L453 326 aa15.26■□□□□ 0.03
UBE3D-201ENST00000237186 HNRNPCL2B2RXH8 293 aa15.26■□□□□ 0.03
UBE3D-201ENST00000237186 HNRNPCL3B7ZW38 293 aa15.26■□□□□ 0.03
UBE3D-201ENST00000237186 PROM1O43490 865 aa15.26■□□□□ 0.03
UBE3D-201ENST00000237186 AIFM1O95831 613 aa15.26■□□□□ 0.03
UBE3D-201ENST00000237186 LGI1O95970 557 aa15.26■□□□□ 0.03
UBE3D-201ENST00000237186 FHP07954 510 aa15.26■□□□□ 0.03
UBE3D-201ENST00000237186 HNRNPCL4P0DMR1 293 aa15.26■□□□□ 0.03
UBE3D-201ENST00000237186 F3P13726 295 aa15.26■□□□□ 0.03
UBE3D-201ENST00000237186 HOXB3P14651 431 aaPredicted RBP15.26■□□□□ 0.03
UBE3D-201ENST00000237186 ALDH6A1Q02252 535 aaKnown RBP15.26■□□□□ 0.03
UBE3D-201ENST00000237186 COX10Q12887 443 aa15.26■□□□□ 0.03
UBE3D-201ENST00000237186 SYT16Q17RD7 645 aa15.26■□□□□ 0.03
UBE3D-201ENST00000237186 TMEM201Q5SNT2 666 aa15.26■□□□□ 0.03
UBE3D-201ENST00000237186 PGBD2Q6P3X8 592 aa15.26■□□□□ 0.03
UBE3D-201ENST00000237186 LACC1Q8IV20 430 aa15.26■□□□□ 0.03
UBE3D-201ENST00000237186 MFSD4AQ8N468 514 aa15.26■□□□□ 0.03
UBE3D-201ENST00000237186 DOCK8Q8NF50 2099 aa15.26■□□□□ 0.03
UBE3D-201ENST00000237186 OR5D16Q8NGK9 328 aa15.26■□□□□ 0.03
UBE3D-201ENST00000237186 SLC7A13Q8TCU3 470 aa15.26■□□□□ 0.03
UBE3D-201ENST00000237186 ZHX1-C8orf76Q96EF9 292 aa15.26■□□□□ 0.03
UBE3D-201ENST00000237186 S1PR5Q9H228 398 aa15.26■□□□□ 0.03
UBE3D-201ENST00000237186 SLC25A19Q9HC21 320 aa15.26■□□□□ 0.03
UBE3D-201ENST00000237186 KLK4Q9Y5K2 254 aa15.26■□□□□ 0.03
UBE3D-201ENST00000237186 FAM227AF5H4B4 570 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 SLC31A1O15431 190 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 AIREO43918 545 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 OR10H3O60404 316 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 CSNK2A2P19784 350 aaPredicted RBP15.25■□□□□ 0.03
UBE3D-201ENST00000237186 ALDH4A1P30038 563 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 MAT2AP31153 395 aaKnown RBP15.25■□□□□ 0.03
UBE3D-201ENST00000237186 STXBP1P61764 594 aaKnown RBP15.25■□□□□ 0.03
UBE3D-201ENST00000237186 GPR19Q15760 415 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 RGS21Q2M5E4 152 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 C19orf48Q6RUI8 117 aa15.25■□□□□ 0.03
UBE3D-201ENST00000237186 DEF8Q6ZN54 512 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms