RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 NBNO60934 754 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 IGHA2P01877 340 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 PSMA3P25788 255 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 SRP9P49458 86 aaKnown RBP12.38□□□□□ -0.43
MSH2-201ENST00000233146 RGS4P49798 205 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 TAS2R60P59551 318 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 RPL38P63173 70 aaKnown RBP12.38□□□□□ -0.43
MSH2-201ENST00000233146 HABP2Q14520 560 aaPredicted RBP12.38□□□□□ -0.43
MSH2-201ENST00000233146 FAM187BQ17R55 369 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 ZNF660Q6AZW8 331 aaPredicted RBP12.38□□□□□ -0.43
MSH2-201ENST00000233146 SLC27A1Q6PCB7 646 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 TMUB2Q71RG4 321 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 BTN2A1Q7KYR7 527 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 SSX9Q7RTT3 188 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 SLC9B2Q86UD5 537 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 HPDLQ96IR7 371 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 MAP3K3Q99759 626 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 GSDMCQ9BYG8 508 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 ENKD1Q9H0I2 346 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 SLC25A32Q9H2D1 315 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 ATXN3LQ9H3M9 355 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 ZNF408Q9H9D4 720 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 AKAP7Q9P0M2 348 aaPredicted RBP12.38□□□□□ -0.43
MSH2-201ENST00000233146 FTSJ1Q9UET6 329 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 HACL1Q9UJ83 578 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 SYNJ2BP-COX16A0A087WUM0 186 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 A8MVJ9 347 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 ARHGEF33A8MVX0 844 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 ZNF593O00488 134 aaPredicted RBP12.37□□□□□ -0.43
MSH2-201ENST00000233146 ALPIP09923 528 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 CBSLP0DN79 551 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 LAP3P28838 519 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 CNR2P34972 360 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 CBSP35520 551 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 TPI1P60174 286 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 MLLT1Q03111 559 aaPredicted RBP12.37□□□□□ -0.43
MSH2-201ENST00000233146 TMEM44Q2T9K0 475 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 HACD4Q5VWC8 232 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 LYPD4Q6UWN0 246 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 ALKAL1Q6UXT8 129 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 PLEKHH3Q7Z736 793 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 SLC44A3Q8N4M1 653 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 MAPKAP1Q9BPZ7 522 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 CHIAQ9BZP6 476 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 COX16Q9P0S2 106 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 ATXN7L1Q9ULK2 861 aaPredicted RBP12.37□□□□□ -0.43
MSH2-201ENST00000233146 PLEKHM1Q9Y4G2 1056 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 A0A1B0GW55 424 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 LCMT2O60294 686 aaKnown RBP12.37□□□□□ -0.43
MSH2-201ENST00000233146 NCR1O76036 304 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 AKR7A3O95154 331 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 KCNK5O95279 499 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 SOD1P00441 154 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 DUX4L2P0CJ85 424 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 DUX4L3P0CJ86 424 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 DUX4L4P0CJ87 422 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 DUX4L5P0CJ88 424 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 DUX4L6P0CJ89 424 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 DUX4L7P0CJ90 424 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 CXCL8P10145 99 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 IRS1P35568 1242 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 ABRAXAS2Q15018 415 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 TMEM255AQ5JRV8 349 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 DGKKQ5KSL6 1271 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 ACOT1Q86TX2 421 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 LAPTM4BQ86VI4 370 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 SKA3Q8IX90 412 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 CMIPQ8IY22 773 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 OXR1Q8N573 874 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 ACER1Q8TDN7 264 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 NT5C3BQ969T7 300 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 ESAMQ96AP7 390 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 TCEAL4Q96EI5 215 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 TPD52L3Q96J77 140 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 DERL2Q9GZP9 239 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 MFSD1Q9H3U5 465 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 C11orf49Q9H6J7 331 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 BARX1Q9HBU1 254 aaPredicted RBP12.37□□□□□ -0.43
MSH2-201ENST00000233146 ZFP57Q9NU63 452 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 DUX4Q9UBX2 424 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 SPIN1Q9Y657 262 aaPredicted RBP12.37□□□□□ -0.43
MSH2-201ENST00000233146 AP1M2Q9Y6Q5 423 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 A0A0G2JMZ2 1700 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 LRRC37A2A6NM11 1700 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 LRRC37AA6NMS7 1700 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 FZD7O75084 574 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 LY86O95711 162 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 SERPINA3P01011 423 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 WARSP23381 471 aaKnown RBP12.37□□□□□ -0.43
MSH2-201ENST00000233146 SLC6A4P31645 630 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 VIPR1P32241 457 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 CDKN2CP42773 168 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 RPL34P49207 117 aaKnown RBP12.37□□□□□ -0.43
MSH2-201ENST00000233146 GEMP55040 296 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 FABP5Q01469 135 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 CHAF1BQ13112 559 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 VSIG10LQ86VR7 867 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 TMEM192Q8IY95 271 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 LGI4Q8N135 537 aa12.37□□□□□ -0.43
MSH2-201ENST00000233146 MS4A4EQ96PG1 132 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms