RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 KLHL21Q9UJP4 597 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 SNX7Q9UNH6 387 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 AP2A2O94973 939 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 GSTM1P09488 218 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 ARAFP10398 606 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 MAPK9P45984 424 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 RUNX1T1Q06455 604 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 SCARB2Q14108 478 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 LARS2Q15031 903 aaKnown RBP19.49■□□□□ 0.71
SNX3-201ENST00000230085 CST6Q15828 149 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 OCLNQ16625 522 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 TBRG1Q3YBR2 411 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 ZNF776Q68DI1 518 aaPredicted RBP19.49■□□□□ 0.71
SNX3-201ENST00000230085 C12orf73Q69YU5 71 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 TRIM40Q6P9F5 258 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 KLHL17Q6TDP4 642 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 KIAA1324Q6UXG2 1013 aaKnown RBP19.49■□□□□ 0.71
SNX3-201ENST00000230085 WDR36Q8NI36 951 aaKnown RBP19.49■□□□□ 0.71
SNX3-201ENST00000230085 KLHL6Q8WZ60 621 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 SLC25A46Q96AG3 418 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 MTERF3Q96E29 417 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 SCRN2Q96FV2 425 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 NEDD4LQ96PU5 975 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 DDX28Q9NUL7 540 aaKnown RBP19.49■□□□□ 0.71
SNX3-201ENST00000230085 CMAHPQ9Y471 501 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 FADS2P1A8MWK0 482 aa19.48■□□□□ 0.71
SNX3-201ENST00000230085 MID1O15344 667 aa19.48■□□□□ 0.71
SNX3-201ENST00000230085 TPST2O60704 377 aa19.48■□□□□ 0.71
SNX3-201ENST00000230085 HSMCR30P0CW71 290 aa19.48■□□□□ 0.71
SNX3-201ENST00000230085 TDGF1P13385 188 aa19.48■□□□□ 0.71
SNX3-201ENST00000230085 PTBP1P26599 531 aaKnown RBP eCLIP19.48■□□□□ 0.71
SNX3-201ENST00000230085 ANGPT1Q15389 498 aa19.48■□□□□ 0.71
SNX3-201ENST00000230085 SPHARQ15513 63 aa19.48■□□□□ 0.71
SNX3-201ENST00000230085 GPAT3Q53EU6 434 aa19.48■□□□□ 0.71
SNX3-201ENST00000230085 CRTC1Q6UUV9 634 aa19.48■□□□□ 0.71
SNX3-201ENST00000230085 UNC5DQ6UXZ4 953 aa19.48■□□□□ 0.71
SNX3-201ENST00000230085 PTCHD4Q6ZW05 846 aa19.48■□□□□ 0.71
SNX3-201ENST00000230085 CACTIN-AS1Q8N1I8 211 aa19.48■□□□□ 0.71
SNX3-201ENST00000230085 NANOGP1Q8N7R0 232 aa19.48■□□□□ 0.71
SNX3-201ENST00000230085 TMIEQ8NEW7 156 aa19.48■□□□□ 0.71
SNX3-201ENST00000230085 APOBEC4Q8WW27 367 aaKnown RBP19.48■□□□□ 0.71
SNX3-201ENST00000230085 MAL2Q969L2 176 aa19.48■□□□□ 0.71
SNX3-201ENST00000230085 TMEM80Q96HE8 168 aa19.48■□□□□ 0.71
SNX3-201ENST00000230085 TMEM246Q9BRR3 403 aa19.48■□□□□ 0.71
SNX3-201ENST00000230085 CPEB1Q9BZB8 566 aaKnown RBP19.48■□□□□ 0.71
SNX3-201ENST00000230085 PRDM8Q9NQV8 689 aa19.48■□□□□ 0.71
SNX3-201ENST00000230085 ITM2CQ9NQX7 267 aa19.48■□□□□ 0.71
SNX3-201ENST00000230085 ACOXLQ9NUZ1 547 aa19.48■□□□□ 0.71
SNX3-201ENST00000230085 KPNA3O00505 521 aaPredicted RBP19.47■□□□□ 0.71
SNX3-201ENST00000230085 SLCO2B1O94956 709 aa19.47■□□□□ 0.71
SNX3-201ENST00000230085 PRNPP04156 253 aa19.47■□□□□ 0.71
SNX3-201ENST00000230085 ANXA4P09525 319 aaPredicted RBP19.47■□□□□ 0.71
SNX3-201ENST00000230085 SERPINA4P29622 427 aa19.47■□□□□ 0.71
SNX3-201ENST00000230085 ERP29P30040 261 aaKnown RBP19.47■□□□□ 0.71
SNX3-201ENST00000230085 DOC2AQ14183 400 aa19.47■□□□□ 0.71
SNX3-201ENST00000230085 BAK1Q16611 211 aa19.47■□□□□ 0.71
SNX3-201ENST00000230085 SLC35F1Q5T1Q4 408 aa19.47■□□□□ 0.71
SNX3-201ENST00000230085 PEX5LQ8IYB4 626 aa19.47■□□□□ 0.71
SNX3-201ENST00000230085 OR4A15Q8NGL6 344 aa19.47■□□□□ 0.71
SNX3-201ENST00000230085 GPR151Q8TDV0 419 aa19.47■□□□□ 0.71
SNX3-201ENST00000230085 KCNS3Q9BQ31 491 aa19.47■□□□□ 0.71
SNX3-201ENST00000230085 REEP4Q9H6H4 257 aa19.47■□□□□ 0.71
SNX3-201ENST00000230085 NIPAL2Q9H841 368 aa19.47■□□□□ 0.71
SNX3-201ENST00000230085 ISYNA1Q9NPH2 558 aa19.47■□□□□ 0.71
SNX3-201ENST00000230085 DIABLOQ9NR28 239 aa19.47■□□□□ 0.71
SNX3-201ENST00000230085 EXO1Q9UQ84 846 aaKnown RBP19.47■□□□□ 0.71
SNX3-201ENST00000230085 PSIP1O75475 530 aaKnown RBP19.47■□□□□ 0.71
SNX3-201ENST00000230085 GADD45GO95257 159 aa19.47■□□□□ 0.71
SNX3-201ENST00000230085 ACADMP11310 421 aa19.47■□□□□ 0.71
SNX3-201ENST00000230085 OSMP13725 252 aa19.47■□□□□ 0.71
SNX3-201ENST00000230085 HOXA6P31267 233 aa19.47■□□□□ 0.71
SNX3-201ENST00000230085 ATP13A5Q4VNC0 1218 aa19.47■□□□□ 0.71
SNX3-201ENST00000230085 GDPD4Q6W3E5 623 aa19.47■□□□□ 0.71
SNX3-201ENST00000230085 THOC6Q86W42 341 aaKnown RBP19.47■□□□□ 0.71
SNX3-201ENST00000230085 OR9Q2Q8NGE9 314 aa19.47■□□□□ 0.71
SNX3-201ENST00000230085 RLN3Q8WXF3 142 aa19.47■□□□□ 0.71
SNX3-201ENST00000230085 WDR34Q96EX3 536 aa19.47■□□□□ 0.71
SNX3-201ENST00000230085 LRIG1Q96JA1 1093 aa19.47■□□□□ 0.71
SNX3-201ENST00000230085 DKK3Q9UBP4 350 aa19.47■□□□□ 0.71
SNX3-201ENST00000230085 REV1Q9UBZ9 1251 aa19.47■□□□□ 0.71
SNX3-201ENST00000230085 SERGEFQ9UGK8 458 aa19.47■□□□□ 0.71
SNX3-201ENST00000230085 FBXO4Q9UKT5 387 aa19.47■□□□□ 0.71
SNX3-201ENST00000230085 MGAT4BQ9UQ53 548 aa19.47■□□□□ 0.71
SNX3-201ENST00000230085 RPL36Q9Y3U8 105 aaKnown RBP19.47■□□□□ 0.71
SNX3-201ENST00000230085 PLXNA2O75051 1894 aa19.46■□□□□ 0.71
SNX3-201ENST00000230085 NUMA1Q14980 2115 aa19.46■□□□□ 0.71
SNX3-201ENST00000230085 A0A1W2PQ09 198 aa19.46■□□□□ 0.71
SNX3-201ENST00000230085 NPIPB15A6NHN6 443 aaPredicted RBP19.46■□□□□ 0.71
SNX3-201ENST00000230085 C1QTNF3-AMACRE9PGA6 284 aa19.46■□□□□ 0.71
SNX3-201ENST00000230085 PCDH17O14917 1159 aa19.46■□□□□ 0.71
SNX3-201ENST00000230085 GALR2O43603 387 aaPredicted RBP19.46■□□□□ 0.71
SNX3-201ENST00000230085 CSO75390 466 aaKnown RBP19.46■□□□□ 0.71
SNX3-201ENST00000230085 CPN2P22792 545 aa19.46■□□□□ 0.71
SNX3-201ENST00000230085 CNR2P34972 360 aa19.46■□□□□ 0.71
SNX3-201ENST00000230085 DRD3P35462 400 aa19.46■□□□□ 0.71
SNX3-201ENST00000230085 CDK6Q00534 326 aa19.46■□□□□ 0.71
SNX3-201ENST00000230085 DOC2BQ14184 412 aa19.46■□□□□ 0.71
SNX3-201ENST00000230085 XKR6Q5GH73 641 aa19.46■□□□□ 0.71
SNX3-201ENST00000230085 FAM46CQ5VWP2 391 aa19.46■□□□□ 0.71
SNX3-201ENST00000230085 PLCZ1Q86YW0 608 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms